RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 DHX57Q6P158 1386 aaKnown RBP26.93■■□□□ 1.9
PRPF40A-209ENST00000486100 DCAF11Q8TEB1 546 aa26.92■■□□□ 1.9
PRPF40A-209ENST00000486100 KDM2AQ9Y2K7 1162 aa26.92■■□□□ 1.9
PRPF40A-209ENST00000486100 PLEKHH1Q9ULM0 1364 aa26.9■■□□□ 1.9
PRPF40A-209ENST00000486100 POTEAQ6S8J7 498 aa26.86■■□□□ 1.89
PRPF40A-209ENST00000486100 ESCO1Q5FWF5 840 aa26.85■■□□□ 1.89
PRPF40A-209ENST00000486100 NHSL1Q5SYE7 1610 aa26.84■■□□□ 1.89
PRPF40A-209ENST00000486100 MEX3CQ5U5Q3 659 aaKnown RBP26.84■■□□□ 1.89
PRPF40A-209ENST00000486100 SOS2Q07890 1332 aaPredicted RBP26.84■■□□□ 1.89
PRPF40A-209ENST00000486100 CDC42BPGQ6DT37 1551 aa26.84■■□□□ 1.89
PRPF40A-209ENST00000486100 LRP6O75581 1613 aa26.83■■□□□ 1.88
PRPF40A-209ENST00000486100 KNDC1Q76NI1 1749 aa26.82■■□□□ 1.88
PRPF40A-209ENST00000486100 NUTM2BA6NNL0 878 aaPredicted RBP26.82■■□□□ 1.88
PRPF40A-209ENST00000486100 NUTM2EB1AL46 878 aaPredicted RBP26.82■■□□□ 1.88
PRPF40A-209ENST00000486100 NUTM2AQ8IVF1 878 aaPredicted RBP26.82■■□□□ 1.88
PRPF40A-209ENST00000486100 PRAM1Q96QH2 718 aa26.82■■□□□ 1.88
PRPF40A-209ENST00000486100 LAMC1P11047 1609 aa26.82■■□□□ 1.88
PRPF40A-209ENST00000486100 SHPRHQ149N8 1683 aa26.82■■□□□ 1.88
PRPF40A-209ENST00000486100 NUTM2FA1L443 756 aa26.81■■□□□ 1.88
PRPF40A-209ENST00000486100 POGKQ9P215 609 aa26.79■■□□□ 1.88
PRPF40A-209ENST00000486100 PNPLA6Q8IY17 1366 aa26.79■■□□□ 1.88
PRPF40A-209ENST00000486100 NPHP3Q7Z494 1330 aa26.78■■□□□ 1.88
PRPF40A-209ENST00000486100 SAFB2Q14151 953 aaKnown RBP eCLIP26.77■■□□□ 1.88
PRPF40A-209ENST00000486100 TRAK1Q9UPV9 953 aa26.77■■□□□ 1.88
PRPF40A-209ENST00000486100 FOXO3O43524 673 aa26.76■■□□□ 1.87
PRPF40A-209ENST00000486100 ADGRB1O14514 1584 aa26.75■■□□□ 1.87
PRPF40A-209ENST00000486100 ZNF772Q68DY9 489 aaPredicted RBP26.75■■□□□ 1.87
PRPF40A-209ENST00000486100 DLC1Q96QB1 1528 aa26.75■■□□□ 1.87
PRPF40A-209ENST00000486100 XPCQ01831 940 aaPredicted RBP26.69■■□□□ 1.86
PRPF40A-209ENST00000486100 PHF8Q9UPP1 1060 aa26.67■■□□□ 1.86
PRPF40A-209ENST00000486100 PXDNQ92626 1479 aa26.67■■□□□ 1.86
PRPF40A-209ENST00000486100 FMN2Q9NZ56 1722 aa26.66■■□□□ 1.86
PRPF40A-209ENST00000486100 C8orf37Q96NL8 207 aa26.66■■□□□ 1.86
PRPF40A-209ENST00000486100 AFF2P51816 1311 aa26.65■■□□□ 1.86
PRPF40A-209ENST00000486100 HIRIP3Q9BW71 556 aaPredicted RBP26.65■■□□□ 1.86
PRPF40A-209ENST00000486100 ADAMTS2O95450 1211 aa26.64■■□□□ 1.86
PRPF40A-209ENST00000486100 KRT28Q7Z3Y7 464 aa26.64■■□□□ 1.86
PRPF40A-209ENST00000486100 MINK1Q8N4C8 1332 aaPredicted RBP26.64■■□□□ 1.85
PRPF40A-209ENST00000486100 SIN3AQ96ST3 1273 aa26.62■■□□□ 1.85
PRPF40A-209ENST00000486100 NGLY1Q96IV0 654 aa26.61■■□□□ 1.85
PRPF40A-209ENST00000486100 ANKARQ7Z5J8 1434 aa26.6■■□□□ 1.85
PRPF40A-209ENST00000486100 WASLO00401 505 aaPredicted RBP26.6■■□□□ 1.85
PRPF40A-209ENST00000486100 RXRBP28702 533 aa26.6■■□□□ 1.85
PRPF40A-209ENST00000486100 PSME1Q06323 249 aa26.6■■□□□ 1.85
PRPF40A-209ENST00000486100 L3MBTL2Q969R5 705 aa26.6■■□□□ 1.85
PRPF40A-209ENST00000486100 SPATA31A3Q5VYP0 1347 aa26.6■■□□□ 1.85
PRPF40A-209ENST00000486100 NBPF1Q3BBV0 1214 aa26.59■■□□□ 1.85
PRPF40A-209ENST00000486100 PMFBP1Q8TBY8 1022 aa26.57■■□□□ 1.84
PRPF40A-209ENST00000486100 QTRT2Q9H974 415 aaKnown RBP26.57■■□□□ 1.84
PRPF40A-209ENST00000486100 ADGRB2O60241 1585 aa26.57■■□□□ 1.84
PRPF40A-209ENST00000486100 EIF3AQ14152 1382 aaKnown RBP26.57■■□□□ 1.84
PRPF40A-209ENST00000486100 KIF1AQ12756 1690 aa26.57■■□□□ 1.84
PRPF40A-209ENST00000486100 NEUROD1Q13562 356 aa26.56■■□□□ 1.84
PRPF40A-209ENST00000486100 COL22A1Q8NFW1 1626 aaPredicted RBP26.54■■□□□ 1.84
PRPF40A-209ENST00000486100 TRIM26Q12899 539 aaPredicted RBP26.54■■□□□ 1.84
PRPF40A-209ENST00000486100 PRR36Q9H6K5 1346 aa26.54■■□□□ 1.84
PRPF40A-209ENST00000486100 FNBP4Q8N3X1 1017 aaPredicted RBP26.53■■□□□ 1.84
PRPF40A-209ENST00000486100 SBNO1A3KN83 1393 aa26.52■■□□□ 1.84
PRPF40A-209ENST00000486100 USP21Q9UK80 565 aa26.51■■□□□ 1.83
PRPF40A-209ENST00000486100 KIAA1210Q9ULL0 1709 aa26.51■■□□□ 1.83
PRPF40A-209ENST00000486100 RBM6P78332 1123 aaKnown RBP26.5■■□□□ 1.83
PRPF40A-209ENST00000486100 TULP4Q9NRJ4 1543 aa26.49■■□□□ 1.83
PRPF40A-209ENST00000486100 RGPD8O14715 1765 aaPredicted RBP26.49■■□□□ 1.83
PRPF40A-209ENST00000486100 CDK19Q9BWU1 502 aa26.49■■□□□ 1.83
PRPF40A-209ENST00000486100 USP32Q8NFA0 1604 aa26.49■■□□□ 1.83
PRPF40A-209ENST00000486100 TNS3Q68CZ2 1445 aa26.48■■□□□ 1.83
PRPF40A-209ENST00000486100 NUDT16Q96DE0 195 aaKnown RBP26.48■■□□□ 1.83
PRPF40A-209ENST00000486100 LMOD2Q6P5Q4 547 aa26.47■■□□□ 1.83
PRPF40A-209ENST00000486100 ARHGEF28Q8N1W1 1705 aaKnown RBP26.47■■□□□ 1.83
PRPF40A-209ENST00000486100 TRPC5Q9UL62 973 aaPredicted RBP26.46■■□□□ 1.83
PRPF40A-209ENST00000486100 GPRASP1Q5JY77 1395 aa26.46■■□□□ 1.83
PRPF40A-209ENST00000486100 CDK12Q9NYV4 1490 aaPredicted RBP26.45■■□□□ 1.82
PRPF40A-209ENST00000486100 NGDNQ8NEJ9 315 aaKnown RBP26.45■■□□□ 1.82
PRPF40A-209ENST00000486100 ARHGEF10O15013 1369 aa26.45■■□□□ 1.82
PRPF40A-209ENST00000486100 CENPJQ9HC77 1338 aaPredicted RBP26.42■■□□□ 1.82
PRPF40A-209ENST00000486100 HAP1P54257 671 aaPredicted RBP26.42■■□□□ 1.82
PRPF40A-209ENST00000486100 CABLES1Q8TDN4 633 aa26.42■■□□□ 1.82
PRPF40A-209ENST00000486100 CCDC61Q9Y6R9 512 aa26.41■■□□□ 1.82
PRPF40A-209ENST00000486100 BCL9LQ86UU0 1499 aa26.4■■□□□ 1.82
PRPF40A-209ENST00000486100 ATP7BP35670 1465 aa26.39■■□□□ 1.82
PRPF40A-209ENST00000486100 PLEKHG5O94827 1062 aa26.39■■□□□ 1.82
PRPF40A-209ENST00000486100 ATRNO75882 1429 aa26.38■■□□□ 1.81
PRPF40A-209ENST00000486100 PLEKHG3A1L390 1219 aa26.36■■□□□ 1.81
PRPF40A-209ENST00000486100 PAK3O75914 559 aaPredicted RBP26.36■■□□□ 1.81
PRPF40A-209ENST00000486100 UNC5CLQ8IV45 518 aa26.36■■□□□ 1.81
PRPF40A-209ENST00000486100 RGS12O14924 1447 aa26.35■■□□□ 1.81
PRPF40A-209ENST00000486100 SRPK2P78362 688 aaKnown RBP26.35■■□□□ 1.81
PRPF40A-209ENST00000486100 NBPF8Q3BBV2 869 aa26.35■■□□□ 1.81
PRPF40A-209ENST00000486100 ROCK2O75116 1388 aaKnown RBP26.34■■□□□ 1.81
PRPF40A-209ENST00000486100 UPF1Q92900 1129 aaKnown RBP eCLIP26.34■■□□□ 1.81
PRPF40A-209ENST00000486100 GJD4Q96KN9 370 aaPredicted RBP26.33■■□□□ 1.81
PRPF40A-209ENST00000486100 SLIT2O94813 1529 aa26.33■■□□□ 1.81
PRPF40A-209ENST00000486100 ACEP12821 1306 aa26.33■■□□□ 1.81
PRPF40A-209ENST00000486100 CABP2Q9NPB3 220 aa26.32■■□□□ 1.8
PRPF40A-209ENST00000486100 POLR3AO14802 1390 aaPredicted RBP26.32■■□□□ 1.8
PRPF40A-209ENST00000486100 TRPM3Q9HCF6 1732 aaPredicted RBP26.31■■□□□ 1.8
PRPF40A-209ENST00000486100 MARF1Q9Y4F3 1742 aaKnown RBP26.31■■□□□ 1.8
PRPF40A-209ENST00000486100 FAM83GA6ND36 823 aa26.3■■□□□ 1.8
PRPF40A-209ENST00000486100 TRPM1Q7Z4N2 1603 aa26.29■■□□□ 1.8
PRPF40A-209ENST00000486100 TONSLQ96HA7 1378 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms