RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 ATAD2Q6PL18 1390 aa29.44■■■□□ 2.3
CHRD-216ENST00000486066 PXDNQ92626 1479 aa29.42■■■□□ 2.3
CHRD-216ENST00000486066 USP21Q9UK80 565 aa29.42■■■□□ 2.3
CHRD-216ENST00000486066 RRBP1Q9P2E9 1410 aaKnown RBP29.42■■■□□ 2.3
CHRD-216ENST00000486066 VGFO15240 615 aaPredicted RBP29.41■■■□□ 2.3
CHRD-216ENST00000486066 TRPC5Q9UL62 973 aaPredicted RBP29.41■■■□□ 2.3
CHRD-216ENST00000486066 BCL9LQ86UU0 1499 aa29.4■■■□□ 2.3
CHRD-216ENST00000486066 RPGRIP1LQ68CZ1 1315 aa29.39■■■□□ 2.3
CHRD-216ENST00000486066 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.35■■■□□ 2.29
CHRD-216ENST00000486066 TECPR2O15040 1411 aa29.33■■■□□ 2.29
CHRD-216ENST00000486066 NPHP3Q7Z494 1330 aa29.32■■■□□ 2.28
CHRD-216ENST00000486066 PPARGC1BQ86YN6 1023 aaKnown RBP29.3■■■□□ 2.28
CHRD-216ENST00000486066 IFT172Q9UG01 1749 aa29.29■■■□□ 2.28
CHRD-216ENST00000486066 KNDC1Q76NI1 1749 aa29.28■■■□□ 2.28
CHRD-216ENST00000486066 GLI3P10071 1580 aa29.26■■■□□ 2.27
CHRD-216ENST00000486066 SLIT2O94813 1529 aa29.25■■■□□ 2.27
CHRD-216ENST00000486066 ESCO1Q5FWF5 840 aa29.24■■■□□ 2.27
CHRD-216ENST00000486066 FMN2Q9NZ56 1722 aa29.24■■■□□ 2.27
CHRD-216ENST00000486066 CCDC125Q86Z20 511 aa29.23■■■□□ 2.27
CHRD-216ENST00000486066 SPATA31E1Q6ZUB1 1445 aa29.22■■■□□ 2.27
CHRD-216ENST00000486066 GJD4Q96KN9 370 aaPredicted RBP29.22■■■□□ 2.27
CHRD-216ENST00000486066 ADGRF5Q8IZF2 1346 aa29.21■■■□□ 2.27
CHRD-216ENST00000486066 FOXO3O43524 673 aa29.21■■■□□ 2.27
CHRD-216ENST00000486066 LRPPRCP42704 1394 aaKnown RBP29.2■■■□□ 2.26
CHRD-216ENST00000486066 KIF1AQ12756 1690 aa29.2■■■□□ 2.26
CHRD-216ENST00000486066 ABCC11Q96J66 1382 aa29.19■■■□□ 2.26
CHRD-216ENST00000486066 ZRANB1Q9UGI0 708 aa29.19■■■□□ 2.26
CHRD-216ENST00000486066 RALGAPBQ86X10 1494 aa29.18■■■□□ 2.26
CHRD-216ENST00000486066 BRWD3Q6RI45 1802 aa29.18■■■□□ 2.26
CHRD-216ENST00000486066 XPCQ01831 940 aaPredicted RBP29.18■■■□□ 2.26
CHRD-216ENST00000486066 SLC4A1APQ9BWU0 796 aaKnown RBP29.18■■■□□ 2.26
CHRD-216ENST00000486066 USP32Q8NFA0 1604 aa29.18■■■□□ 2.26
CHRD-216ENST00000486066 PLEKHH1Q9ULM0 1364 aa29.17■■■□□ 2.26
CHRD-216ENST00000486066 SPATA31A3Q5VYP0 1347 aa29.16■■■□□ 2.26
CHRD-216ENST00000486066 PIK3C2GO75747 1445 aa29.15■■■□□ 2.26
CHRD-216ENST00000486066 WAPLQ7Z5K2 1190 aa29.15■■■□□ 2.26
CHRD-216ENST00000486066 FOXD1Q16676 465 aa29.13■■■□□ 2.25
CHRD-216ENST00000486066 UNC5CLQ8IV45 518 aa29.13■■■□□ 2.25
CHRD-216ENST00000486066 ANKRD30BQ9BXX2 1392 aa29.12■■■□□ 2.25
CHRD-216ENST00000486066 CCDC144AA2RUR9 1427 aa29.11■■■□□ 2.25
CHRD-216ENST00000486066 BLMP54132 1417 aaPredicted RBP29.11■■■□□ 2.25
CHRD-216ENST00000486066 RGPD8O14715 1765 aaPredicted RBP29.11■■■□□ 2.25
CHRD-216ENST00000486066 ABCA3Q99758 1704 aa29.1■■■□□ 2.25
CHRD-216ENST00000486066 NWD2Q9ULI1 1742 aa29.09■■■□□ 2.25
CHRD-216ENST00000486066 YTHDC2Q9H6S0 1430 aaKnown RBP29.08■■■□□ 2.25
CHRD-216ENST00000486066 PLCH1Q4KWH8 1693 aa29.08■■■□□ 2.25
CHRD-216ENST00000486066 NUTM2FA1L443 756 aa29.07■■■□□ 2.24
CHRD-216ENST00000486066 STK26Q9P289 416 aa29.07■■■□□ 2.24
CHRD-216ENST00000486066 TMEM132EQ6IEE7 984 aa29.05■■■□□ 2.24
CHRD-216ENST00000486066 SIRT1Q96EB6 747 aa29.05■■■□□ 2.24
CHRD-216ENST00000486066 TNS3Q68CZ2 1445 aa29.04■■■□□ 2.24
CHRD-216ENST00000486066 NRXN1Q9ULB1 1477 aa29.04■■■□□ 2.24
CHRD-216ENST00000486066 ONECUT3O60422 494 aaPredicted RBP29.03■■■□□ 2.24
CHRD-216ENST00000486066 KRT28Q7Z3Y7 464 aa29.01■■■□□ 2.23
CHRD-216ENST00000486066 LRP5O75197 1615 aa29.01■■■□□ 2.23
CHRD-216ENST00000486066 VPS72Q15906 364 aa29■■■□□ 2.23
CHRD-216ENST00000486066 RGL3Q3MIN7 710 aa28.99■■■□□ 2.23
CHRD-216ENST00000486066 SBNO1A3KN83 1393 aa28.99■■■□□ 2.23
CHRD-216ENST00000486066 NRAPQ86VF7 1730 aa28.97■■■□□ 2.23
CHRD-216ENST00000486066 DEFB132Q7Z7B7 95 aa28.97■■■□□ 2.23
CHRD-216ENST00000486066 SEPT12Q8IYM1 358 aa28.97■■■□□ 2.23
CHRD-216ENST00000486066 C14orf93Q9H972 538 aaKnown RBP28.96■■■□□ 2.23
CHRD-216ENST00000486066 PHF8Q9UPP1 1060 aa28.95■■■□□ 2.22
CHRD-216ENST00000486066 TRPM3Q9HCF6 1732 aaPredicted RBP28.94■■■□□ 2.22
CHRD-216ENST00000486066 MPHOSPH9Q99550 1183 aa28.93■■■□□ 2.22
CHRD-216ENST00000486066 ADGRB2O60241 1585 aa28.92■■■□□ 2.22
CHRD-216ENST00000486066 CABLES1Q8TDN4 633 aa28.92■■■□□ 2.22
CHRD-216ENST00000486066 DLC1Q96QB1 1528 aa28.91■■■□□ 2.22
CHRD-216ENST00000486066 ALS2Q96Q42 1657 aa28.89■■■□□ 2.22
CHRD-216ENST00000486066 ARHGEF10O15013 1369 aa28.89■■■□□ 2.22
CHRD-216ENST00000486066 ANKARQ7Z5J8 1434 aa28.88■■■□□ 2.21
CHRD-216ENST00000486066 PSME1Q06323 249 aa28.88■■■□□ 2.21
CHRD-216ENST00000486066 CRYBG1Q9Y4K1 1723 aa28.87■■■□□ 2.21
CHRD-216ENST00000486066 FAM83GA6ND36 823 aa28.86■■■□□ 2.21
CHRD-216ENST00000486066 KRT27Q7Z3Y8 459 aa28.86■■■□□ 2.21
CHRD-216ENST00000486066 ADGRB1O14514 1584 aa28.85■■■□□ 2.21
CHRD-216ENST00000486066 DHX57Q6P158 1386 aaKnown RBP28.85■■■□□ 2.21
CHRD-216ENST00000486066 CFAP70Q5T0N1 1121 aa28.84■■■□□ 2.21
CHRD-216ENST00000486066 COL14A1Q05707 1796 aaKnown RBP28.83■■■□□ 2.21
CHRD-216ENST00000486066 PRAM1Q96QH2 718 aa28.82■■■□□ 2.2
CHRD-216ENST00000486066 THSD7AQ9UPZ6 1657 aa28.8■■■□□ 2.2
CHRD-216ENST00000486066 SF3B2Q13435 895 aaKnown RBP28.8■■■□□ 2.2
CHRD-216ENST00000486066 RGPD1P0DJD0 1748 aa28.8■■■□□ 2.2
CHRD-216ENST00000486066 HAP1P54257 671 aaPredicted RBP28.79■■■□□ 2.2
CHRD-216ENST00000486066 TNS1Q9HBL0 1735 aaKnown RBP28.77■■■□□ 2.2
CHRD-216ENST00000486066 DISP2A7MBM2 1401 aa28.76■■■□□ 2.19
CHRD-216ENST00000486066 PMFBP1Q8TBY8 1022 aa28.75■■■□□ 2.19
CHRD-216ENST00000486066 CCDC9Q9Y3X0 531 aaKnown RBP28.75■■■□□ 2.19
CHRD-216ENST00000486066 TULP4Q9NRJ4 1543 aa28.74■■■□□ 2.19
CHRD-216ENST00000486066 PRR36Q9H6K5 1346 aa28.74■■■□□ 2.19
CHRD-216ENST00000486066 SAFB2Q14151 953 aaKnown RBP eCLIP28.74■■■□□ 2.19
CHRD-216ENST00000486066 HRCP23327 699 aa28.73■■■□□ 2.19
CHRD-216ENST00000486066 FAM98CQ17RN3 349 aaKnown RBP28.73■■■□□ 2.19
CHRD-216ENST00000486066 LMOD2Q6P5Q4 547 aa28.72■■■□□ 2.19
CHRD-216ENST00000486066 BTG4Q9NY30 223 aa28.72■■■□□ 2.19
CHRD-216ENST00000486066 BAG6P46379 1132 aa28.71■■■□□ 2.19
CHRD-216ENST00000486066 SPATA31A5Q5VU36 1347 aa28.7■■■□□ 2.19
CHRD-216ENST00000486066 SPATA31A7Q8IWB4 1347 aa28.7■■■□□ 2.19
CHRD-216ENST00000486066 ACIN1Q9UKV3 1341 aaKnown RBP28.7■■■□□ 2.19
CHRD-216ENST00000486066 PLEKHG5O94827 1062 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms