RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 C14orf93Q9H972 538 aaKnown RBP10.88□□□□□ -0.67
CPNE1-226ENST00000486021 STK26Q9P289 416 aa10.88□□□□□ -0.67
CPNE1-226ENST00000486021 EIF3AQ14152 1382 aaKnown RBP10.88□□□□□ -0.67
CPNE1-226ENST00000486021 ROBO2Q9HCK4 1378 aa10.88□□□□□ -0.67
CPNE1-226ENST00000486021 NUTM2BA6NNL0 878 aaPredicted RBP10.87□□□□□ -0.67
CPNE1-226ENST00000486021 NUTM2EB1AL46 878 aaPredicted RBP10.87□□□□□ -0.67
CPNE1-226ENST00000486021 ESCO1Q5FWF5 840 aa10.87□□□□□ -0.67
CPNE1-226ENST00000486021 NUTM2AQ8IVF1 878 aaPredicted RBP10.87□□□□□ -0.67
CPNE1-226ENST00000486021 POGKQ9P215 609 aa10.87□□□□□ -0.67
CPNE1-226ENST00000486021 FMN2Q9NZ56 1722 aa10.87□□□□□ -0.67
CPNE1-226ENST00000486021 MARF1Q9Y4F3 1742 aaKnown RBP10.87□□□□□ -0.67
CPNE1-226ENST00000486021 PSME1Q06323 249 aa10.86□□□□□ -0.67
CPNE1-226ENST00000486021 RXRBP28702 533 aa10.85□□□□□ -0.67
CPNE1-226ENST00000486021 NGLY1Q96IV0 654 aa10.85□□□□□ -0.67
CPNE1-226ENST00000486021 NRXN1Q9ULB1 1477 aa10.85□□□□□ -0.67
CPNE1-226ENST00000486021 RGPD8O14715 1765 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-226ENST00000486021 SOS2Q07890 1332 aaPredicted RBP10.84□□□□□ -0.67
CPNE1-226ENST00000486021 DLC1Q96QB1 1528 aa10.84□□□□□ -0.67
CPNE1-226ENST00000486021 DCAF11Q8TEB1 546 aa10.84□□□□□ -0.67
CPNE1-226ENST00000486021 RGS17Q9UGC6 210 aaPredicted RBP10.84□□□□□ -0.67
CPNE1-226ENST00000486021 ITSN1Q15811 1721 aa10.84□□□□□ -0.67
CPNE1-226ENST00000486021 KIAA1210Q9ULL0 1709 aa10.84□□□□□ -0.67
CPNE1-226ENST00000486021 COL22A1Q8NFW1 1626 aaPredicted RBP10.84□□□□□ -0.67
CPNE1-226ENST00000486021 PNPLA6Q8IY17 1366 aa10.83□□□□□ -0.68
CPNE1-226ENST00000486021 TMEM132EQ6IEE7 984 aa10.83□□□□□ -0.68
CPNE1-226ENST00000486021 CDK12Q9NYV4 1490 aaPredicted RBP10.82□□□□□ -0.68
CPNE1-226ENST00000486021 HAP1P54257 671 aaPredicted RBP10.82□□□□□ -0.68
CPNE1-226ENST00000486021 POTEAQ6S8J7 498 aa10.82□□□□□ -0.68
CPNE1-226ENST00000486021 WAPLQ7Z5K2 1190 aa10.82□□□□□ -0.68
CPNE1-226ENST00000486021 ORAI2Q96SN7 254 aa10.82□□□□□ -0.68
CPNE1-226ENST00000486021 KDM2AQ9Y2K7 1162 aa10.82□□□□□ -0.68
CPNE1-226ENST00000486021 CFAP70Q5T0N1 1121 aa10.81□□□□□ -0.68
CPNE1-226ENST00000486021 C8orf37Q96NL8 207 aa10.81□□□□□ -0.68
CPNE1-226ENST00000486021 AFF2P51816 1311 aa10.81□□□□□ -0.68
CPNE1-226ENST00000486021 LRP6O75581 1613 aa10.8□□□□□ -0.68
CPNE1-226ENST00000486021 FOXO3O43524 673 aa10.8□□□□□ -0.68
CPNE1-226ENST00000486021 RBM6P78332 1123 aaKnown RBP10.8□□□□□ -0.68
CPNE1-226ENST00000486021 ADGRB2O60241 1585 aa10.8□□□□□ -0.68
CPNE1-226ENST00000486021 ANKARQ7Z5J8 1434 aa10.79□□□□□ -0.68
CPNE1-226ENST00000486021 PRAM1Q96QH2 718 aa10.79□□□□□ -0.68
CPNE1-226ENST00000486021 QTRT2Q9H974 415 aaKnown RBP10.79□□□□□ -0.68
CPNE1-226ENST00000486021 TRPC5Q9UL62 973 aaPredicted RBP10.79□□□□□ -0.68
CPNE1-226ENST00000486021 PHF8Q9UPP1 1060 aa10.79□□□□□ -0.68
CPNE1-226ENST00000486021 GPRASP1Q5JY77 1395 aa10.78□□□□□ -0.68
CPNE1-226ENST00000486021 KRT28Q7Z3Y7 464 aa10.78□□□□□ -0.68
CPNE1-226ENST00000486021 USP21Q9UK80 565 aa10.78□□□□□ -0.68
CPNE1-226ENST00000486021 TRAK1Q9UPV9 953 aa10.78□□□□□ -0.68
CPNE1-226ENST00000486021 ARHGEF10O15013 1369 aa10.77□□□□□ -0.68
CPNE1-226ENST00000486021 NUTM2FA1L443 756 aa10.77□□□□□ -0.69
CPNE1-226ENST00000486021 ADAMTS2O95450 1211 aa10.77□□□□□ -0.69
CPNE1-226ENST00000486021 DDX17Q92841 729 aaKnown RBP10.77□□□□□ -0.69
CPNE1-226ENST00000486021 ARHGEF28Q8N1W1 1705 aaKnown RBP10.77□□□□□ -0.69
CPNE1-226ENST00000486021 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.77□□□□□ -0.69
CPNE1-226ENST00000486021 PXDNQ92626 1479 aa10.76□□□□□ -0.69
CPNE1-226ENST00000486021 SAFB2Q14151 953 aaKnown RBP eCLIP10.76□□□□□ -0.69
CPNE1-226ENST00000486021 SBNO1A3KN83 1393 aa10.76□□□□□ -0.69
CPNE1-226ENST00000486021 ADGRB1O14514 1584 aa10.75□□□□□ -0.69
CPNE1-226ENST00000486021 SPATA31A3Q5VYP0 1347 aa10.75□□□□□ -0.69
CPNE1-226ENST00000486021 PLEKHH1Q9ULM0 1364 aa10.75□□□□□ -0.69
CPNE1-226ENST00000486021 NWD2Q9ULI1 1742 aa10.75□□□□□ -0.69
CPNE1-226ENST00000486021 TNS3Q68CZ2 1445 aa10.75□□□□□ -0.69
CPNE1-226ENST00000486021 TULP4Q9NRJ4 1543 aa10.74□□□□□ -0.69
CPNE1-226ENST00000486021 WASLO00401 505 aaPredicted RBP10.74□□□□□ -0.69
CPNE1-226ENST00000486021 LMOD2Q6P5Q4 547 aa10.74□□□□□ -0.69
CPNE1-226ENST00000486021 FNBP4Q8N3X1 1017 aaPredicted RBP10.74□□□□□ -0.69
CPNE1-226ENST00000486021 NGDNQ8NEJ9 315 aaKnown RBP10.73□□□□□ -0.69
CPNE1-226ENST00000486021 USP32Q8NFA0 1604 aa10.73□□□□□ -0.69
CPNE1-226ENST00000486021 MINK1Q8N4C8 1332 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-226ENST00000486021 XPCQ01831 940 aaPredicted RBP10.71□□□□□ -0.69
CPNE1-226ENST00000486021 ATAD2Q6PL18 1390 aa10.71□□□□□ -0.69
CPNE1-226ENST00000486021 CCDC125Q86Z20 511 aa10.71□□□□□ -0.69
CPNE1-226ENST00000486021 UNC5CLQ8IV45 518 aa10.7□□□□□ -0.7
CPNE1-226ENST00000486021 PMFBP1Q8TBY8 1022 aa10.7□□□□□ -0.7
CPNE1-226ENST00000486021 ABCA3Q99758 1704 aa10.7□□□□□ -0.7
CPNE1-226ENST00000486021 PLCH1Q4KWH8 1693 aa10.69□□□□□ -0.7
CPNE1-226ENST00000486021 PAK3O75914 559 aaPredicted RBP10.69□□□□□ -0.7
CPNE1-226ENST00000486021 HIRIP3Q9BW71 556 aaPredicted RBP10.69□□□□□ -0.7
CPNE1-226ENST00000486021 COL14A1Q05707 1796 aaKnown RBP10.69□□□□□ -0.7
CPNE1-226ENST00000486021 TRPM3Q9HCF6 1732 aaPredicted RBP10.69□□□□□ -0.7
CPNE1-226ENST00000486021 ALS2Q96Q42 1657 aa10.69□□□□□ -0.7
CPNE1-226ENST00000486021 QRICH2Q9H0J4 1663 aa10.69□□□□□ -0.7
CPNE1-226ENST00000486021 ATP7BP35670 1465 aa10.68□□□□□ -0.7
CPNE1-226ENST00000486021 ATRNO75882 1429 aa10.68□□□□□ -0.7
CPNE1-226ENST00000486021 BRD4O60885 1362 aaPredicted RBP10.68□□□□□ -0.7
CPNE1-226ENST00000486021 SLC24A1O60721 1099 aa10.68□□□□□ -0.7
CPNE1-226ENST00000486021 UPF1Q92900 1129 aaKnown RBP eCLIP10.68□□□□□ -0.7
CPNE1-226ENST00000486021 GJD4Q96KN9 370 aaPredicted RBP10.68□□□□□ -0.7
CPNE1-226ENST00000486021 CCDC61Q9Y6R9 512 aa10.68□□□□□ -0.7
CPNE1-226ENST00000486021 CENPJQ9HC77 1338 aaPredicted RBP10.67□□□□□ -0.7
CPNE1-226ENST00000486021 SRPK2P78362 688 aaKnown RBP10.67□□□□□ -0.7
CPNE1-226ENST00000486021 SF3B2Q13435 895 aaKnown RBP10.67□□□□□ -0.7
CPNE1-226ENST00000486021 NUDT16Q96DE0 195 aaKnown RBP10.67□□□□□ -0.7
CPNE1-226ENST00000486021 CDK19Q9BWU1 502 aa10.67□□□□□ -0.7
CPNE1-226ENST00000486021 CCDC9Q9Y3X0 531 aaKnown RBP10.67□□□□□ -0.7
CPNE1-226ENST00000486021 TRPM1Q7Z4N2 1603 aa10.66□□□□□ -0.7
CPNE1-226ENST00000486021 SLIT2O94813 1529 aa10.66□□□□□ -0.7
CPNE1-226ENST00000486021 TOPAZ1Q8N9V7 1692 aa10.66□□□□□ -0.7
CPNE1-226ENST00000486021 RGS12O14924 1447 aa10.66□□□□□ -0.7
CPNE1-226ENST00000486021 EVC2Q86UK5 1308 aa10.65□□□□□ -0.7
CPNE1-226ENST00000486021 NEUROD1Q13562 356 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms