RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 ATF3P18847 181 aa33.61■■■□□ 2.97
ABCF3-216ENST00000485921 NALCNQ8IZF0 1738 aa33.6■■■□□ 2.97
ABCF3-216ENST00000485921 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.6■■■□□ 2.97
ABCF3-216ENST00000485921 ARHGEF28Q8N1W1 1705 aaKnown RBP33.59■■■□□ 2.97
ABCF3-216ENST00000485921 CADPS2Q86UW7 1296 aa33.58■■■□□ 2.97
ABCF3-216ENST00000485921 DCCP43146 1447 aa33.57■■■□□ 2.96
ABCF3-216ENST00000485921 FBXO41Q8TF61 875 aa33.57■■■□□ 2.96
ABCF3-216ENST00000485921 PIP4K2BP78356 416 aa33.52■■■□□ 2.96
ABCF3-216ENST00000485921 SLAIN2Q9P270 581 aa33.52■■■□□ 2.96
ABCF3-216ENST00000485921 MINK1Q8N4C8 1332 aaPredicted RBP33.52■■■□□ 2.96
ABCF3-216ENST00000485921 CENPJQ9HC77 1338 aaPredicted RBP33.52■■■□□ 2.96
ABCF3-216ENST00000485921 EIF3AQ14152 1382 aaKnown RBP33.5■■■□□ 2.95
ABCF3-216ENST00000485921 SCAF1Q9H7N4 1312 aaKnown RBP33.5■■■□□ 2.95
ABCF3-216ENST00000485921 HIRIP3Q9BW71 556 aaPredicted RBP33.49■■■□□ 2.95
ABCF3-216ENST00000485921 CDC42BPGQ6DT37 1551 aa33.47■■■□□ 2.95
ABCF3-216ENST00000485921 MST1RQ04912 1400 aa33.45■■■□□ 2.94
ABCF3-216ENST00000485921 ADGRB2O60241 1585 aa33.42■■■□□ 2.94
ABCF3-216ENST00000485921 WASLO00401 505 aaPredicted RBP33.4■■■□□ 2.94
ABCF3-216ENST00000485921 QRICH2Q9H0J4 1663 aa33.39■■■□□ 2.94
ABCF3-216ENST00000485921 NUTM2FA1L443 756 aa33.39■■■□□ 2.94
ABCF3-216ENST00000485921 C1orf167Q5SNV9 1468 aa33.38■■■□□ 2.93
ABCF3-216ENST00000485921 USP47Q96K76 1375 aa33.37■■■□□ 2.93
ABCF3-216ENST00000485921 FMN2Q9NZ56 1722 aa33.36■■■□□ 2.93
ABCF3-216ENST00000485921 ST20-MTHFSA0A0A6YYL1 179 aa33.34■■■□□ 2.93
ABCF3-216ENST00000485921 ILDR1Q86SU0 546 aaPredicted RBP33.34■■■□□ 2.93
ABCF3-216ENST00000485921 CDK19Q9BWU1 502 aa33.34■■■□□ 2.93
ABCF3-216ENST00000485921 BRINP3Q76B58 766 aa33.33■■■□□ 2.93
ABCF3-216ENST00000485921 ROBO1Q9Y6N7 1651 aa33.33■■■□□ 2.93
ABCF3-216ENST00000485921 ORAI2Q96SN7 254 aa33.31■■■□□ 2.92
ABCF3-216ENST00000485921 ESCO1Q5FWF5 840 aa33.3■■■□□ 2.92
ABCF3-216ENST00000485921 SBNO2Q9Y2G9 1366 aa33.3■■■□□ 2.92
ABCF3-216ENST00000485921 EVC2Q86UK5 1308 aa33.28■■■□□ 2.92
ABCF3-216ENST00000485921 ANKARQ7Z5J8 1434 aa33.28■■■□□ 2.92
ABCF3-216ENST00000485921 TULP4Q9NRJ4 1543 aa33.27■■■□□ 2.92
ABCF3-216ENST00000485921 PRR36Q9H6K5 1346 aa33.27■■■□□ 2.92
ABCF3-216ENST00000485921 SRPK2P78362 688 aaKnown RBP33.26■■■□□ 2.91
ABCF3-216ENST00000485921 TESK2Q96S53 571 aa33.26■■■□□ 2.91
ABCF3-216ENST00000485921 EIF4G2P78344 907 aaKnown RBP eCLIP33.24■■■□□ 2.91
ABCF3-216ENST00000485921 NUDT16Q96DE0 195 aaKnown RBP33.24■■■□□ 2.91
ABCF3-216ENST00000485921 CABP2Q9NPB3 220 aa33.24■■■□□ 2.91
ABCF3-216ENST00000485921 HSPA1LP34931 641 aa33.23■■■□□ 2.91
ABCF3-216ENST00000485921 USP32Q8NFA0 1604 aa33.23■■■□□ 2.91
ABCF3-216ENST00000485921 RGPD8O14715 1765 aaPredicted RBP33.21■■■□□ 2.91
ABCF3-216ENST00000485921 SLC24A1O60721 1099 aa33.2■■■□□ 2.91
ABCF3-216ENST00000485921 PHF8Q9UPP1 1060 aa33.2■■■□□ 2.91
ABCF3-216ENST00000485921 ATP7BP35670 1465 aa33.19■■■□□ 2.9
ABCF3-216ENST00000485921 HSPA5P11021 654 aaKnown RBP33.19■■■□□ 2.9
ABCF3-216ENST00000485921 DDX17Q92841 729 aaKnown RBP33.18■■■□□ 2.9
ABCF3-216ENST00000485921 CCDC61Q9Y6R9 512 aa33.17■■■□□ 2.9
ABCF3-216ENST00000485921 ZEB1P37275 1124 aaPredicted RBP33.16■■■□□ 2.9
ABCF3-216ENST00000485921 PMFBP1Q8TBY8 1022 aa33.15■■■□□ 2.9
ABCF3-216ENST00000485921 AHDC1Q5TGY3 1603 aaPredicted RBP33.14■■■□□ 2.9
ABCF3-216ENST00000485921 FOXO3O43524 673 aa33.14■■■□□ 2.9
ABCF3-216ENST00000485921 TMF1P82094 1093 aa33.13■■■□□ 2.89
ABCF3-216ENST00000485921 KIF1AQ12756 1690 aa33.12■■■□□ 2.89
ABCF3-216ENST00000485921 PHLPP1O60346 1717 aa33.11■■■□□ 2.89
ABCF3-216ENST00000485921 NPHP3Q7Z494 1330 aa33.11■■■□□ 2.89
ABCF3-216ENST00000485921 NHSL1Q5SYE7 1610 aa33.11■■■□□ 2.89
ABCF3-216ENST00000485921 ITSN1Q15811 1721 aa33.09■■■□□ 2.89
ABCF3-216ENST00000485921 ATAD2Q6PL18 1390 aa33.09■■■□□ 2.89
ABCF3-216ENST00000485921 DISP3Q9P2K9 1392 aa33.09■■■□□ 2.89
ABCF3-216ENST00000485921 PLEKHG3A1L390 1219 aa33.08■■■□□ 2.89
ABCF3-216ENST00000485921 NGDNQ8NEJ9 315 aaKnown RBP33.08■■■□□ 2.89
ABCF3-216ENST00000485921 PUS7Q96PZ0 661 aaKnown RBP33.08■■■□□ 2.89
ABCF3-216ENST00000485921 PPIP5K1Q6PFW1 1433 aa33.08■■■□□ 2.89
ABCF3-216ENST00000485921 TOPAZ1Q8N9V7 1692 aa33.07■■■□□ 2.89
ABCF3-216ENST00000485921 SOS2Q07890 1332 aaPredicted RBP33.06■■■□□ 2.88
ABCF3-216ENST00000485921 XPCQ01831 940 aaPredicted RBP33.06■■■□□ 2.88
ABCF3-216ENST00000485921 CABP1Q9NZU7 370 aa33.06■■■□□ 2.88
ABCF3-216ENST00000485921 COL16A1Q07092 1604 aaPredicted RBP33.04■■■□□ 2.88
ABCF3-216ENST00000485921 PSME1Q06323 249 aa33.04■■■□□ 2.88
ABCF3-216ENST00000485921 KRT28Q7Z3Y7 464 aa33.04■■■□□ 2.88
ABCF3-216ENST00000485921 CDCA8Q53HL2 280 aa33.03■■■□□ 2.88
ABCF3-216ENST00000485921 ACEP12821 1306 aa33.02■■■□□ 2.88
ABCF3-216ENST00000485921 PXDNQ92626 1479 aa33.01■■■□□ 2.88
ABCF3-216ENST00000485921 POLR3AO14802 1390 aaPredicted RBP33■■■□□ 2.87
ABCF3-216ENST00000485921 LRRC59Q96AG4 307 aaKnown RBP33■■■□□ 2.87
ABCF3-216ENST00000485921 TMC1Q8TDI8 760 aa32.98■■■□□ 2.87
ABCF3-216ENST00000485921 JCADQ9P266 1359 aa32.95■■■□□ 2.86
ABCF3-216ENST00000485921 SLC12A5Q9H2X9 1139 aa32.94■■■□□ 2.86
ABCF3-216ENST00000485921 SBNO1A3KN83 1393 aa32.92■■■□□ 2.86
ABCF3-216ENST00000485921 POLR3GLQ9BT43 218 aa32.9■■■□□ 2.86
ABCF3-216ENST00000485921 SPATA31A3Q5VYP0 1347 aa32.9■■■□□ 2.86
ABCF3-216ENST00000485921 NINLQ9Y2I6 1382 aa32.9■■■□□ 2.86
ABCF3-216ENST00000485921 C11orf95C9JLR9 678 aaPredicted RBP32.89■■■□□ 2.86
ABCF3-216ENST00000485921 ZNF692Q9BU19 519 aaPredicted RBP32.89■■■□□ 2.86
ABCF3-216ENST00000485921 PAK3O75914 559 aaPredicted RBP32.88■■■□□ 2.85
ABCF3-216ENST00000485921 PNPLA6Q8IY17 1366 aa32.87■■■□□ 2.85
ABCF3-216ENST00000485921 CPSF1Q10570 1443 aaKnown RBP32.86■■■□□ 2.85
ABCF3-216ENST00000485921 TNS3Q68CZ2 1445 aa32.86■■■□□ 2.85
ABCF3-216ENST00000485921 TRPM3Q9HCF6 1732 aaPredicted RBP32.85■■■□□ 2.85
ABCF3-216ENST00000485921 LMOD2Q6P5Q4 547 aa32.85■■■□□ 2.85
ABCF3-216ENST00000485921 HDGFL2Q7Z4V5 671 aaPredicted RBP32.85■■■□□ 2.85
ABCF3-216ENST00000485921 TERF2IPQ9NYB0 399 aa32.85■■■□□ 2.85
ABCF3-216ENST00000485921 CD163L1Q9NR16 1453 aa32.85■■■□□ 2.85
ABCF3-216ENST00000485921 USP6P35125 1406 aa32.85■■■□□ 2.85
ABCF3-216ENST00000485921 SHPRHQ149N8 1683 aa32.83■■■□□ 2.85
ABCF3-216ENST00000485921 KTN1Q86UP2 1357 aaKnown RBP32.83■■■□□ 2.85
ABCF3-216ENST00000485921 BRD4O60885 1362 aaPredicted RBP32.82■■■□□ 2.84
ABCF3-216ENST00000485921 AKAP12Q02952 1782 aa32.81■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms