RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 TMEM132EQ6IEE7 984 aa30.33■■■□□ 2.45
CHRD-215ENST00000485883 QTRT2Q9H974 415 aaKnown RBP30.33■■■□□ 2.45
CHRD-215ENST00000485883 CDK12Q9NYV4 1490 aaPredicted RBP30.31■■■□□ 2.44
CHRD-215ENST00000485883 ANKRD30BQ9BXX2 1392 aa30.31■■■□□ 2.44
CHRD-215ENST00000485883 ESCO1Q5FWF5 840 aa30.31■■■□□ 2.44
CHRD-215ENST00000485883 NGLY1Q96IV0 654 aa30.31■■■□□ 2.44
CHRD-215ENST00000485883 LRPPRCP42704 1394 aaKnown RBP30.28■■■□□ 2.44
CHRD-215ENST00000485883 PLEKHH1Q9ULM0 1364 aa30.28■■■□□ 2.44
CHRD-215ENST00000485883 NUTM2FA1L443 756 aa30.28■■■□□ 2.44
CHRD-215ENST00000485883 CDC42BPGQ6DT37 1551 aa30.28■■■□□ 2.44
CHRD-215ENST00000485883 IFT172Q9UG01 1749 aa30.27■■■□□ 2.44
CHRD-215ENST00000485883 RBM6P78332 1123 aaKnown RBP30.27■■■□□ 2.44
CHRD-215ENST00000485883 TECPR2O15040 1411 aa30.27■■■□□ 2.44
CHRD-215ENST00000485883 RGS12O14924 1447 aa30.26■■■□□ 2.43
CHRD-215ENST00000485883 PIK3C2GO75747 1445 aa30.26■■■□□ 2.43
CHRD-215ENST00000485883 XPCQ01831 940 aaPredicted RBP30.26■■■□□ 2.43
CHRD-215ENST00000485883 FOXO3O43524 673 aa30.25■■■□□ 2.43
CHRD-215ENST00000485883 ABCC11Q96J66 1382 aa30.25■■■□□ 2.43
CHRD-215ENST00000485883 NPHP3Q7Z494 1330 aa30.24■■■□□ 2.43
CHRD-215ENST00000485883 PXDNQ92626 1479 aa30.21■■■□□ 2.43
CHRD-215ENST00000485883 USP21Q9UK80 565 aa30.21■■■□□ 2.43
CHRD-215ENST00000485883 YTHDC2Q9H6S0 1430 aaKnown RBP30.2■■■□□ 2.42
CHRD-215ENST00000485883 FNBP4Q8N3X1 1017 aaPredicted RBP30.18■■■□□ 2.42
CHRD-215ENST00000485883 MYOM2P54296 1465 aa30.18■■■□□ 2.42
CHRD-215ENST00000485883 COL22A1Q8NFW1 1626 aaPredicted RBP30.18■■■□□ 2.42
CHRD-215ENST00000485883 C14orf93Q9H972 538 aaKnown RBP30.17■■■□□ 2.42
CHRD-215ENST00000485883 KNDC1Q76NI1 1749 aa30.16■■■□□ 2.42
CHRD-215ENST00000485883 CFAP70Q5T0N1 1121 aa30.15■■■□□ 2.42
CHRD-215ENST00000485883 TRPC5Q9UL62 973 aaPredicted RBP30.14■■■□□ 2.42
CHRD-215ENST00000485883 RAB3GAP2Q9H2M9 1393 aa30.11■■■□□ 2.41
CHRD-215ENST00000485883 NRXN1Q9ULB1 1477 aa30.11■■■□□ 2.41
CHRD-215ENST00000485883 SIRT1Q96EB6 747 aa30.1■■■□□ 2.41
CHRD-215ENST00000485883 ATRNO75882 1429 aa30.1■■■□□ 2.41
CHRD-215ENST00000485883 FMN2Q9NZ56 1722 aa30.1■■■□□ 2.41
CHRD-215ENST00000485883 ACIN1Q9UKV3 1341 aaKnown RBP30.09■■■□□ 2.41
CHRD-215ENST00000485883 BCL9LQ86UU0 1499 aa30.07■■■□□ 2.4
CHRD-215ENST00000485883 SAFB2Q14151 953 aaKnown RBP eCLIP30.07■■■□□ 2.4
CHRD-215ENST00000485883 DHX57Q6P158 1386 aaKnown RBP30.06■■■□□ 2.4
CHRD-215ENST00000485883 SPATA31A3Q5VYP0 1347 aa30.06■■■□□ 2.4
CHRD-215ENST00000485883 KRT28Q7Z3Y7 464 aa30.04■■■□□ 2.4
CHRD-215ENST00000485883 PRAM1Q96QH2 718 aa30.04■■■□□ 2.4
CHRD-215ENST00000485883 PHF8Q9UPP1 1060 aa30.02■■■□□ 2.4
CHRD-215ENST00000485883 KIF1AQ12756 1690 aa30■■■□□ 2.39
CHRD-215ENST00000485883 ATAD2Q6PL18 1390 aa30■■■□□ 2.39
CHRD-215ENST00000485883 MARF1Q9Y4F3 1742 aaKnown RBP29.99■■■□□ 2.39
CHRD-215ENST00000485883 RGPD8O14715 1765 aaPredicted RBP29.99■■■□□ 2.39
CHRD-215ENST00000485883 GJD4Q96KN9 370 aaPredicted RBP29.97■■■□□ 2.39
CHRD-215ENST00000485883 PLEKHG5O94827 1062 aa29.96■■■□□ 2.39
CHRD-215ENST00000485883 POGKQ9P215 609 aa29.96■■■□□ 2.39
CHRD-215ENST00000485883 CABLES1Q8TDN4 633 aa29.95■■■□□ 2.39
CHRD-215ENST00000485883 TRAK1Q9UPV9 953 aa29.94■■■□□ 2.38
CHRD-215ENST00000485883 KDM2AQ9Y2K7 1162 aa29.94■■■□□ 2.38
CHRD-215ENST00000485883 SLIT2O94813 1529 aa29.93■■■□□ 2.38
CHRD-215ENST00000485883 DLC1Q96QB1 1528 aa29.93■■■□□ 2.38
CHRD-215ENST00000485883 UNC5CLQ8IV45 518 aa29.93■■■□□ 2.38
CHRD-215ENST00000485883 TNS3Q68CZ2 1445 aa29.93■■■□□ 2.38
CHRD-215ENST00000485883 ADGRB1O14514 1584 aa29.93■■■□□ 2.38
CHRD-215ENST00000485883 PSME1Q06323 249 aa29.92■■■□□ 2.38
CHRD-215ENST00000485883 PMFBP1Q8TBY8 1022 aa29.92■■■□□ 2.38
CHRD-215ENST00000485883 HIRIP3Q9BW71 556 aaPredicted RBP29.91■■■□□ 2.38
CHRD-215ENST00000485883 EP400Q96L91 3159 aa29.9■■■□□ 2.38
CHRD-215ENST00000485883 DCAF11Q8TEB1 546 aa29.9■■■□□ 2.38
CHRD-215ENST00000485883 USP32Q8NFA0 1604 aa29.89■■■□□ 2.38
CHRD-215ENST00000485883 LMOD2Q6P5Q4 547 aa29.89■■■□□ 2.38
CHRD-215ENST00000485883 SBNO1A3KN83 1393 aa29.89■■■□□ 2.37
CHRD-215ENST00000485883 HAP1P54257 671 aaPredicted RBP29.88■■■□□ 2.37
CHRD-215ENST00000485883 RALGAPBQ86X10 1494 aa29.87■■■□□ 2.37
CHRD-215ENST00000485883 GLI3P10071 1580 aa29.86■■■□□ 2.37
CHRD-215ENST00000485883 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.86■■■□□ 2.37
CHRD-215ENST00000485883 MINK1Q8N4C8 1332 aaPredicted RBP29.86■■■□□ 2.37
CHRD-215ENST00000485883 ANKARQ7Z5J8 1434 aa29.86■■■□□ 2.37
CHRD-215ENST00000485883 ADGRB2O60241 1585 aa29.84■■■□□ 2.37
CHRD-215ENST00000485883 PRR36Q9H6K5 1346 aa29.83■■■□□ 2.37
CHRD-215ENST00000485883 ARHGEF10O15013 1369 aa29.81■■■□□ 2.36
CHRD-215ENST00000485883 SRCAPQ6ZRS2 3230 aa29.79■■■□□ 2.36
CHRD-215ENST00000485883 FAM83GA6ND36 823 aa29.78■■■□□ 2.36
CHRD-215ENST00000485883 WASLO00401 505 aaPredicted RBP29.78■■■□□ 2.36
CHRD-215ENST00000485883 VPS72Q15906 364 aa29.78■■■□□ 2.36
CHRD-215ENST00000485883 HRCP23327 699 aa29.77■■■□□ 2.36
CHRD-215ENST00000485883 ABCA3Q99758 1704 aa29.76■■■□□ 2.36
CHRD-215ENST00000485883 CCDC125Q86Z20 511 aa29.76■■■□□ 2.35
CHRD-215ENST00000485883 SEPT12Q8IYM1 358 aa29.75■■■□□ 2.35
CHRD-215ENST00000485883 CCDC9Q9Y3X0 531 aaKnown RBP29.75■■■□□ 2.35
CHRD-215ENST00000485883 STAC3Q96MF2 364 aa29.74■■■□□ 2.35
CHRD-215ENST00000485883 TULP4Q9NRJ4 1543 aa29.74■■■□□ 2.35
CHRD-215ENST00000485883 TRPM3Q9HCF6 1732 aaPredicted RBP29.74■■■□□ 2.35
CHRD-215ENST00000485883 PLCH1Q4KWH8 1693 aa29.73■■■□□ 2.35
CHRD-215ENST00000485883 GPRASP1Q5JY77 1395 aa29.73■■■□□ 2.35
CHRD-215ENST00000485883 EIF3AQ14152 1382 aaKnown RBP29.72■■■□□ 2.35
CHRD-215ENST00000485883 BRWD3Q6RI45 1802 aa29.71■■■□□ 2.35
CHRD-215ENST00000485883 NWD2Q9ULI1 1742 aa29.7■■■□□ 2.34
CHRD-215ENST00000485883 ONECUT3O60422 494 aaPredicted RBP29.69■■■□□ 2.34
CHRD-215ENST00000485883 NGDNQ8NEJ9 315 aaKnown RBP29.69■■■□□ 2.34
CHRD-215ENST00000485883 ZRANB1Q9UGI0 708 aa29.69■■■□□ 2.34
CHRD-215ENST00000485883 ALS2Q96Q42 1657 aa29.68■■■□□ 2.34
CHRD-215ENST00000485883 BTG4Q9NY30 223 aa29.67■■■□□ 2.34
CHRD-215ENST00000485883 BLMP54132 1417 aaPredicted RBP29.67■■■□□ 2.34
CHRD-215ENST00000485883 PAK3O75914 559 aaPredicted RBP29.66■■■□□ 2.34
CHRD-215ENST00000485883 ARHGEF28Q8N1W1 1705 aaKnown RBP29.65■■■□□ 2.34
CHRD-215ENST00000485883 DEFB132Q7Z7B7 95 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms