RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 ST20-MTHFSA0A0A6YYL1 179 aa17.96■□□□□ 0.47
HDAC7-223ENST00000485796 C19orf44Q9H6X5 657 aa17.95■□□□□ 0.46
HDAC7-223ENST00000485796 ADGRL3Q9HAR2 1447 aa17.95■□□□□ 0.46
HDAC7-223ENST00000485796 HSPA5P11021 654 aaKnown RBP17.94■□□□□ 0.46
HDAC7-223ENST00000485796 NCOA3Q9Y6Q9 1424 aa17.94■□□□□ 0.46
HDAC7-223ENST00000485796 NALCNQ8IZF0 1738 aa17.94■□□□□ 0.46
HDAC7-223ENST00000485796 NUTM2FA1L443 756 aa17.92■□□□□ 0.46
HDAC7-223ENST00000485796 TESK2Q96S53 571 aa17.92■□□□□ 0.46
HDAC7-223ENST00000485796 MSH6P52701 1360 aa17.91■□□□□ 0.46
HDAC7-223ENST00000485796 EIF3AQ14152 1382 aaKnown RBP17.91■□□□□ 0.46
HDAC7-223ENST00000485796 WASLO00401 505 aaPredicted RBP17.89■□□□□ 0.45
HDAC7-223ENST00000485796 ATF3P18847 181 aa17.89■□□□□ 0.45
HDAC7-223ENST00000485796 EIF4G2P78344 907 aaKnown RBP eCLIP17.89■□□□□ 0.45
HDAC7-223ENST00000485796 CDK19Q9BWU1 502 aa17.89■□□□□ 0.45
HDAC7-223ENST00000485796 QRICH2Q9H0J4 1663 aa17.89■□□□□ 0.45
HDAC7-223ENST00000485796 UBAP1LF5GYI3 381 aa17.88■□□□□ 0.45
HDAC7-223ENST00000485796 IQSEC2Q5JU85 1478 aa17.88■□□□□ 0.45
HDAC7-223ENST00000485796 CABP2Q9NPB3 220 aa17.87■□□□□ 0.45
HDAC7-223ENST00000485796 PRR36Q9H6K5 1346 aa17.87■□□□□ 0.45
HDAC7-223ENST00000485796 TULP4Q9NRJ4 1543 aa17.87■□□□□ 0.45
HDAC7-223ENST00000485796 CADPS2Q86UW7 1296 aa17.86■□□□□ 0.45
HDAC7-223ENST00000485796 SLAIN2Q9P270 581 aa17.86■□□□□ 0.45
HDAC7-223ENST00000485796 MST1RQ04912 1400 aa17.86■□□□□ 0.45
HDAC7-223ENST00000485796 ADGRB2O60241 1585 aa17.85■□□□□ 0.45
HDAC7-223ENST00000485796 CDC42BPGQ6DT37 1551 aa17.85■□□□□ 0.45
HDAC7-223ENST00000485796 DCCP43146 1447 aa17.84■□□□□ 0.45
HDAC7-223ENST00000485796 DISP3Q9P2K9 1392 aa17.84■□□□□ 0.45
HDAC7-223ENST00000485796 C11orf95C9JLR9 678 aaPredicted RBP17.84■□□□□ 0.45
HDAC7-223ENST00000485796 PIP4K2BP78356 416 aa17.84■□□□□ 0.45
HDAC7-223ENST00000485796 ORAI2Q96SN7 254 aa17.84■□□□□ 0.45
HDAC7-223ENST00000485796 C1orf167Q5SNV9 1468 aa17.83■□□□□ 0.45
HDAC7-223ENST00000485796 SBNO2Q9Y2G9 1366 aa17.82■□□□□ 0.44
HDAC7-223ENST00000485796 TOM1O60784 492 aa17.82■□□□□ 0.44
HDAC7-223ENST00000485796 SRPK2P78362 688 aaKnown RBP17.82■□□□□ 0.44
HDAC7-223ENST00000485796 NUDT16Q96DE0 195 aaKnown RBP17.82■□□□□ 0.44
HDAC7-223ENST00000485796 FMN2Q9NZ56 1722 aa17.81■□□□□ 0.44
HDAC7-223ENST00000485796 EVC2Q86UK5 1308 aa17.81■□□□□ 0.44
HDAC7-223ENST00000485796 USP32Q8NFA0 1604 aa17.8■□□□□ 0.44
HDAC7-223ENST00000485796 DDX17Q92841 729 aaKnown RBP17.8■□□□□ 0.44
HDAC7-223ENST00000485796 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
HDAC7-223ENST00000485796 ESCO1Q5FWF5 840 aa17.79■□□□□ 0.44
HDAC7-223ENST00000485796 BRINP3Q76B58 766 aa17.79■□□□□ 0.44
HDAC7-223ENST00000485796 ATP7BP35670 1465 aa17.78■□□□□ 0.44
HDAC7-223ENST00000485796 RGPD8O14715 1765 aaPredicted RBP17.77■□□□□ 0.44
HDAC7-223ENST00000485796 TMF1P82094 1093 aa17.77■□□□□ 0.44
HDAC7-223ENST00000485796 PMFBP1Q8TBY8 1022 aa17.77■□□□□ 0.44
HDAC7-223ENST00000485796 ANKARQ7Z5J8 1434 aa17.75■□□□□ 0.43
HDAC7-223ENST00000485796 CABP1Q9NZU7 370 aa17.75■□□□□ 0.43
HDAC7-223ENST00000485796 PHF8Q9UPP1 1060 aa17.75■□□□□ 0.43
HDAC7-223ENST00000485796 POLR3GLQ9BT43 218 aa17.74■□□□□ 0.43
HDAC7-223ENST00000485796 CCDC61Q9Y6R9 512 aa17.74■□□□□ 0.43
HDAC7-223ENST00000485796 SLC12A5Q9H2X9 1139 aa17.73■□□□□ 0.43
HDAC7-223ENST00000485796 ROBO1Q9Y6N7 1651 aa17.73■□□□□ 0.43
HDAC7-223ENST00000485796 FOXO3O43524 673 aa17.72■□□□□ 0.43
HDAC7-223ENST00000485796 XPCQ01831 940 aaPredicted RBP17.72■□□□□ 0.43
HDAC7-223ENST00000485796 FBXO41Q8TF61 875 aa17.72■□□□□ 0.43
HDAC7-223ENST00000485796 PPIP5K1Q6PFW1 1433 aa17.72■□□□□ 0.43
HDAC7-223ENST00000485796 PLEKHG3A1L390 1219 aa17.71■□□□□ 0.43
HDAC7-223ENST00000485796 TMC1Q8TDI8 760 aa17.71■□□□□ 0.43
HDAC7-223ENST00000485796 KIF7Q2M1P5 1343 aa17.71■□□□□ 0.42
HDAC7-223ENST00000485796 PUS7Q96PZ0 661 aaKnown RBP17.7■□□□□ 0.42
HDAC7-223ENST00000485796 ACEP12821 1306 aa17.7■□□□□ 0.42
HDAC7-223ENST00000485796 ATAD2Q6PL18 1390 aa17.69■□□□□ 0.42
HDAC7-223ENST00000485796 TOPAZ1Q8N9V7 1692 aa17.69■□□□□ 0.42
HDAC7-223ENST00000485796 SLC24A1O60721 1099 aa17.69■□□□□ 0.42
HDAC7-223ENST00000485796 HSPA1LP34931 641 aa17.69■□□□□ 0.42
HDAC7-223ENST00000485796 WASHC2AQ641Q2 1341 aa17.69■□□□□ 0.42
HDAC7-223ENST00000485796 NGDNQ8NEJ9 315 aaKnown RBP17.68■□□□□ 0.42
HDAC7-223ENST00000485796 CCDC7Q96M83 1385 aa17.66■□□□□ 0.42
HDAC7-223ENST00000485796 CDCA8Q53HL2 280 aa17.66■□□□□ 0.42
HDAC7-223ENST00000485796 KRT28Q7Z3Y7 464 aa17.66■□□□□ 0.42
HDAC7-223ENST00000485796 CD163L1Q9NR16 1453 aa17.66■□□□□ 0.42
HDAC7-223ENST00000485796 POLR3AO14802 1390 aaPredicted RBP17.66■□□□□ 0.42
HDAC7-223ENST00000485796 PSME1Q06323 249 aa17.64■□□□□ 0.41
HDAC7-223ENST00000485796 SOS2Q07890 1332 aaPredicted RBP17.64■□□□□ 0.41
HDAC7-223ENST00000485796 PXDNQ92626 1479 aa17.63■□□□□ 0.41
HDAC7-223ENST00000485796 ILDR1Q86SU0 546 aaPredicted RBP17.63■□□□□ 0.41
HDAC7-223ENST00000485796 NPHP3Q7Z494 1330 aa17.63■□□□□ 0.41
HDAC7-223ENST00000485796 NHSL1Q5SYE7 1610 aa17.62■□□□□ 0.41
HDAC7-223ENST00000485796 AHDC1Q5TGY3 1603 aaPredicted RBP17.62■□□□□ 0.41
HDAC7-223ENST00000485796 KIF1AQ12756 1690 aa17.62■□□□□ 0.41
HDAC7-223ENST00000485796 ITSN1Q15811 1721 aa17.62■□□□□ 0.41
HDAC7-223ENST00000485796 A0A1W2PP64 1363 aa17.62■□□□□ 0.41
HDAC7-223ENST00000485796 CPSF1Q10570 1443 aaKnown RBP17.62■□□□□ 0.41
HDAC7-223ENST00000485796 MYOM1P52179 1685 aa17.61■□□□□ 0.41
HDAC7-223ENST00000485796 CARD14Q9BXL6 1004 aa17.61■□□□□ 0.41
HDAC7-223ENST00000485796 PHLPP1O60346 1717 aa17.59■□□□□ 0.41
HDAC7-223ENST00000485796 COL16A1Q07092 1604 aaPredicted RBP17.59■□□□□ 0.41
HDAC7-223ENST00000485796 SSH2Q76I76 1423 aa17.59■□□□□ 0.41
HDAC7-223ENST00000485796 PANK3Q9H999 370 aa17.59■□□□□ 0.41
HDAC7-223ENST00000485796 USP6P35125 1406 aa17.58■□□□□ 0.41
HDAC7-223ENST00000485796 KTN1Q86UP2 1357 aaKnown RBP17.58■□□□□ 0.4
HDAC7-223ENST00000485796 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.4
HDAC7-223ENST00000485796 PAK3O75914 559 aaPredicted RBP17.58■□□□□ 0.4
HDAC7-223ENST00000485796 HDGFL2Q7Z4V5 671 aaPredicted RBP17.58■□□□□ 0.4
HDAC7-223ENST00000485796 ANKRD36BQ8N2N9 1353 aa17.57■□□□□ 0.4
HDAC7-223ENST00000485796 NINLQ9Y2I6 1382 aa17.57■□□□□ 0.4
HDAC7-223ENST00000485796 SPATA31A3Q5VYP0 1347 aa17.57■□□□□ 0.4
HDAC7-223ENST00000485796 TTC21BQ7Z4L5 1316 aa17.57■□□□□ 0.4
HDAC7-223ENST00000485796 PLEKHG5O94827 1062 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms