RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 LRPPRCP42704 1394 aaKnown RBP20.25■□□□□ 0.83
SCAF4-206ENST00000485790 PNPLA6Q8IY17 1366 aa20.25■□□□□ 0.83
SCAF4-206ENST00000485790 FOXO3O43524 673 aa20.25■□□□□ 0.83
SCAF4-206ENST00000485790 RBM6P78332 1123 aaKnown RBP20.25■□□□□ 0.83
SCAF4-206ENST00000485790 SPATA31E1Q6ZUB1 1445 aa20.25■□□□□ 0.83
SCAF4-206ENST00000485790 PRAG1Q86YV5 1406 aa20.25■□□□□ 0.83
SCAF4-206ENST00000485790 NUTM2FA1L443 756 aa20.22■□□□□ 0.83
SCAF4-206ENST00000485790 DHX57Q6P158 1386 aaKnown RBP20.21■□□□□ 0.83
SCAF4-206ENST00000485790 SHPRHQ149N8 1683 aa20.21■□□□□ 0.83
SCAF4-206ENST00000485790 UPF1Q92900 1129 aaKnown RBP eCLIP20.2■□□□□ 0.82
SCAF4-206ENST00000485790 USP21Q9UK80 565 aa20.2■□□□□ 0.82
SCAF4-206ENST00000485790 HRCP23327 699 aa20.19■□□□□ 0.82
SCAF4-206ENST00000485790 CFAP70Q5T0N1 1121 aa20.19■□□□□ 0.82
SCAF4-206ENST00000485790 STAC3Q96MF2 364 aa20.18■□□□□ 0.82
SCAF4-206ENST00000485790 POGKQ9P215 609 aa20.18■□□□□ 0.82
SCAF4-206ENST00000485790 TRPC5Q9UL62 973 aaPredicted RBP20.18■□□□□ 0.82
SCAF4-206ENST00000485790 PSME1Q06323 249 aa20.17■□□□□ 0.82
SCAF4-206ENST00000485790 RAB3GAP2Q9H2M9 1393 aa20.17■□□□□ 0.82
SCAF4-206ENST00000485790 XPCQ01831 940 aaPredicted RBP20.16■□□□□ 0.82
SCAF4-206ENST00000485790 FNBP4Q8N3X1 1017 aaPredicted RBP20.16■□□□□ 0.82
SCAF4-206ENST00000485790 TECPR2O15040 1411 aa20.16■□□□□ 0.82
SCAF4-206ENST00000485790 YTHDC2Q9H6S0 1430 aaKnown RBP20.16■□□□□ 0.82
SCAF4-206ENST00000485790 KRT28Q7Z3Y7 464 aa20.15■□□□□ 0.82
SCAF4-206ENST00000485790 PIK3C2GO75747 1445 aa20.15■□□□□ 0.82
SCAF4-206ENST00000485790 NHSL1Q5SYE7 1610 aa20.14■□□□□ 0.81
SCAF4-206ENST00000485790 PRAM1Q96QH2 718 aa20.14■□□□□ 0.81
SCAF4-206ENST00000485790 KDM2AQ9Y2K7 1162 aa20.14■□□□□ 0.81
SCAF4-206ENST00000485790 CDK12Q9NYV4 1490 aaPredicted RBP20.13■□□□□ 0.81
SCAF4-206ENST00000485790 PPLO60437 1756 aa20.13■□□□□ 0.81
SCAF4-206ENST00000485790 NALCNQ8IZF0 1738 aa20.13■□□□□ 0.81
SCAF4-206ENST00000485790 PLEKHH1Q9ULM0 1364 aa20.12■□□□□ 0.81
SCAF4-206ENST00000485790 DCAF11Q8TEB1 546 aa20.12■□□□□ 0.81
SCAF4-206ENST00000485790 PHF8Q9UPP1 1060 aa20.12■□□□□ 0.81
SCAF4-206ENST00000485790 HAP1P54257 671 aaPredicted RBP20.11■□□□□ 0.81
SCAF4-206ENST00000485790 SAFB2Q14151 953 aaKnown RBP eCLIP20.11■□□□□ 0.81
SCAF4-206ENST00000485790 SPATA31A3Q5VYP0 1347 aa20.08■□□□□ 0.81
SCAF4-206ENST00000485790 SETD1AO15047 1707 aaKnown RBP20.08■□□□□ 0.81
SCAF4-206ENST00000485790 TRAK1Q9UPV9 953 aa20.08■□□□□ 0.81
SCAF4-206ENST00000485790 CDC42BPGQ6DT37 1551 aa20.08■□□□□ 0.8
SCAF4-206ENST00000485790 LMOD2Q6P5Q4 547 aa20.07■□□□□ 0.8
SCAF4-206ENST00000485790 GJD4Q96KN9 370 aaPredicted RBP20.04■□□□□ 0.8
SCAF4-206ENST00000485790 LAMC1P11047 1609 aa20.04■□□□□ 0.8
SCAF4-206ENST00000485790 MYOM2P54296 1465 aa20.04■□□□□ 0.8
SCAF4-206ENST00000485790 NRXN1Q9ULB1 1477 aa20.04■□□□□ 0.8
SCAF4-206ENST00000485790 PXDNQ92626 1479 aa20.03■□□□□ 0.8
SCAF4-206ENST00000485790 UNC5CLQ8IV45 518 aa20.02■□□□□ 0.8
SCAF4-206ENST00000485790 ATAD2Q6PL18 1390 aa20.01■□□□□ 0.79
SCAF4-206ENST00000485790 PMFBP1Q8TBY8 1022 aa20.01■□□□□ 0.79
SCAF4-206ENST00000485790 CCDC125Q86Z20 511 aa20■□□□□ 0.79
SCAF4-206ENST00000485790 HIRIP3Q9BW71 556 aaPredicted RBP20■□□□□ 0.79
SCAF4-206ENST00000485790 RGS12O14924 1447 aa20■□□□□ 0.79
SCAF4-206ENST00000485790 EIF3AQ14152 1382 aaKnown RBP19.99■□□□□ 0.79
SCAF4-206ENST00000485790 PLEKHG5O94827 1062 aa19.99■□□□□ 0.79
SCAF4-206ENST00000485790 MINK1Q8N4C8 1332 aaPredicted RBP19.99■□□□□ 0.79
SCAF4-206ENST00000485790 SBNO1A3KN83 1393 aa19.98■□□□□ 0.79
SCAF4-206ENST00000485790 GPRASP1Q5JY77 1395 aa19.98■□□□□ 0.79
SCAF4-206ENST00000485790 WASLO00401 505 aaPredicted RBP19.98■□□□□ 0.79
SCAF4-206ENST00000485790 ARHGEF10O15013 1369 aa19.97■□□□□ 0.79
SCAF4-206ENST00000485790 ATRNO75882 1429 aa19.97■□□□□ 0.79
SCAF4-206ENST00000485790 NGDNQ8NEJ9 315 aaKnown RBP19.97■□□□□ 0.79
SCAF4-206ENST00000485790 CABLES1Q8TDN4 633 aa19.97■□□□□ 0.79
SCAF4-206ENST00000485790 BCL9LQ86UU0 1499 aa19.97■□□□□ 0.79
SCAF4-206ENST00000485790 ANKARQ7Z5J8 1434 aa19.95■□□□□ 0.78
SCAF4-206ENST00000485790 CCDC9Q9Y3X0 531 aaKnown RBP19.95■□□□□ 0.78
SCAF4-206ENST00000485790 IFT172Q9UG01 1749 aa19.94■□□□□ 0.78
SCAF4-206ENST00000485790 DLC1Q96QB1 1528 aa19.93■□□□□ 0.78
SCAF4-206ENST00000485790 PAK3O75914 559 aaPredicted RBP19.93■□□□□ 0.78
SCAF4-206ENST00000485790 COL22A1Q8NFW1 1626 aaPredicted RBP19.93■□□□□ 0.78
SCAF4-206ENST00000485790 TNS3Q68CZ2 1445 aa19.93■□□□□ 0.78
SCAF4-206ENST00000485790 VPS72Q15906 364 aa19.92■□□□□ 0.78
SCAF4-206ENST00000485790 KNDC1Q76NI1 1749 aa19.91■□□□□ 0.78
SCAF4-206ENST00000485790 FAM83GA6ND36 823 aa19.91■□□□□ 0.78
SCAF4-206ENST00000485790 NUDT16Q96DE0 195 aaKnown RBP19.9■□□□□ 0.78
SCAF4-206ENST00000485790 ZRANB1Q9UGI0 708 aa19.89■□□□□ 0.77
SCAF4-206ENST00000485790 KIF1AQ12756 1690 aa19.88■□□□□ 0.77
SCAF4-206ENST00000485790 SEPT12Q8IYM1 358 aa19.88■□□□□ 0.77
SCAF4-206ENST00000485790 CDK19Q9BWU1 502 aa19.88■□□□□ 0.77
SCAF4-206ENST00000485790 FMN2Q9NZ56 1722 aa19.88■□□□□ 0.77
SCAF4-206ENST00000485790 ONECUT3O60422 494 aaPredicted RBP19.87■□□□□ 0.77
SCAF4-206ENST00000485790 SF3B2Q13435 895 aaKnown RBP19.87■□□□□ 0.77
SCAF4-206ENST00000485790 SLIT2O94813 1529 aa19.86■□□□□ 0.77
SCAF4-206ENST00000485790 PRR36Q9H6K5 1346 aa19.86■□□□□ 0.77
SCAF4-206ENST00000485790 CCDC61Q9Y6R9 512 aa19.86■□□□□ 0.77
SCAF4-206ENST00000485790 ADGRB1O14514 1584 aa19.86■□□□□ 0.77
SCAF4-206ENST00000485790 BTG4Q9NY30 223 aa19.85■□□□□ 0.77
SCAF4-206ENST00000485790 A0A0G2JS52 829 aa19.84■□□□□ 0.77
SCAF4-206ENST00000485790 MYT1Q01538 1121 aa19.84■□□□□ 0.77
SCAF4-206ENST00000485790 RALGAPBQ86X10 1494 aa19.83■□□□□ 0.76
SCAF4-206ENST00000485790 KRT27Q7Z3Y8 459 aa19.82■□□□□ 0.76
SCAF4-206ENST00000485790 NBPF1Q3BBV0 1214 aa19.81■□□□□ 0.76
SCAF4-206ENST00000485790 NBPF8Q3BBV2 869 aa19.81■□□□□ 0.76
SCAF4-206ENST00000485790 PRDM11Q9NQV5 511 aa19.81■□□□□ 0.76
SCAF4-206ENST00000485790 PLEKHG3A1L390 1219 aa19.8■□□□□ 0.76
SCAF4-206ENST00000485790 SRPK2P78362 688 aaKnown RBP19.79■□□□□ 0.76
SCAF4-206ENST00000485790 TULP4Q9NRJ4 1543 aa19.78■□□□□ 0.76
SCAF4-206ENST00000485790 FAM98CQ17RN3 349 aaKnown RBP19.78■□□□□ 0.76
SCAF4-206ENST00000485790 ACEP12821 1306 aa19.77■□□□□ 0.76
SCAF4-206ENST00000485790 ADGRB2O60241 1585 aa19.77■□□□□ 0.76
SCAF4-206ENST00000485790 EVA1CP58658 441 aa19.76■□□□□ 0.75
SCAF4-206ENST00000485790 ABTB2Q8N961 1025 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms