RNA–Protein interactions for RNA: ENST00000484213.1

ABCD3-205, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best)

Gene ABCD3, Length 4,367 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-205ENST00000484213 C19orf44Q9H6X5 657 aa5.97□□□□□ -1.45
ABCD3-205ENST00000484213 CAMSAP1Q5T5Y3 1602 aa5.97□□□□□ -1.45
ABCD3-205ENST00000484213 ROCK1Q13464 1354 aa5.97□□□□□ -1.45
ABCD3-205ENST00000484213 FAM135BQ49AJ0 1406 aa5.97□□□□□ -1.45
ABCD3-205ENST00000484213 NUTM2BA6NNL0 878 aaPredicted RBP5.97□□□□□ -1.45
ABCD3-205ENST00000484213 NUTM2EB1AL46 878 aaPredicted RBP5.97□□□□□ -1.45
ABCD3-205ENST00000484213 NUTM2DQ5VT03 806 aaPredicted RBP5.97□□□□□ -1.45
ABCD3-205ENST00000484213 NUTM2AQ8IVF1 878 aaPredicted RBP5.97□□□□□ -1.45
ABCD3-205ENST00000484213 ARXQ96QS3 562 aa5.97□□□□□ -1.45
ABCD3-205ENST00000484213 DCCP43146 1447 aa5.97□□□□□ -1.45
ABCD3-205ENST00000484213 SLC4A3P48751 1232 aa5.97□□□□□ -1.45
ABCD3-205ENST00000484213 PSEN1P49768 467 aa5.97□□□□□ -1.45
ABCD3-205ENST00000484213 COL17A1Q9UMD9 1497 aaPredicted RBP5.96□□□□□ -1.45
ABCD3-205ENST00000484213 SYCP2Q9BX26 1530 aa5.96□□□□□ -1.45
ABCD3-205ENST00000484213 NPM2Q86SE8 214 aaKnown RBP5.96□□□□□ -1.46
ABCD3-205ENST00000484213 ZRANB1Q9UGI0 708 aa5.96□□□□□ -1.46
ABCD3-205ENST00000484213 TRIM52Q96A61 297 aa5.95□□□□□ -1.46
ABCD3-205ENST00000484213 CCDC9Q9Y3X0 531 aaKnown RBP5.95□□□□□ -1.46
ABCD3-205ENST00000484213 DAPK1P53355 1430 aa5.95□□□□□ -1.46
ABCD3-205ENST00000484213 NLRP6P59044 892 aa5.95□□□□□ -1.46
ABCD3-205ENST00000484213 AAMPQ13685 434 aa5.95□□□□□ -1.46
ABCD3-205ENST00000484213 RBM33Q96EV2 1170 aaKnown RBP5.95□□□□□ -1.46
ABCD3-205ENST00000484213 MED14O60244 1454 aa5.95□□□□□ -1.46
ABCD3-205ENST00000484213 DEPDC5O75140 1603 aa5.95□□□□□ -1.46
ABCD3-205ENST00000484213 USP35Q9P2H5 1018 aa5.95□□□□□ -1.46
ABCD3-205ENST00000484213 HFM1A2PYH4 1435 aa5.95□□□□□ -1.46
ABCD3-205ENST00000484213 BRD4O60885 1362 aaPredicted RBP5.95□□□□□ -1.46
ABCD3-205ENST00000484213 ATAD2Q6PL18 1390 aa5.95□□□□□ -1.46
ABCD3-205ENST00000484213 NPHP3Q7Z494 1330 aa5.95□□□□□ -1.46
ABCD3-205ENST00000484213 ANKRD30BQ9BXX2 1392 aa5.95□□□□□ -1.46
ABCD3-205ENST00000484213 RRBP1Q9P2E9 1410 aaKnown RBP5.94□□□□□ -1.46
ABCD3-205ENST00000484213 PLEKHG1Q9ULL1 1385 aa5.94□□□□□ -1.46
ABCD3-205ENST00000484213 RSPH6AQ9H0K4 717 aa5.94□□□□□ -1.46
ABCD3-205ENST00000484213 DAXXQ9UER7 740 aaPredicted RBP5.94□□□□□ -1.46
ABCD3-205ENST00000484213 ZNF142P52746 1687 aaPredicted RBP5.94□□□□□ -1.46
ABCD3-205ENST00000484213 PLXNC1O60486 1568 aa5.94□□□□□ -1.46
ABCD3-205ENST00000484213 NCKAP5LQ9HCH0 1330 aa5.94□□□□□ -1.46
ABCD3-205ENST00000484213 RXRBP28702 533 aa5.94□□□□□ -1.46
ABCD3-205ENST00000484213 GPRASP1Q5JY77 1395 aa5.94□□□□□ -1.46
ABCD3-205ENST00000484213 TMEM2Q9UHN6 1383 aa5.94□□□□□ -1.46
ABCD3-205ENST00000484213 PCMTD1Q96MG8 357 aaPredicted RBP5.94□□□□□ -1.46
ABCD3-205ENST00000484213 EFCAB6Q5THR3 1501 aa5.94□□□□□ -1.46
ABCD3-205ENST00000484213 PDE4AP27815 886 aa5.93□□□□□ -1.46
ABCD3-205ENST00000484213 NBPF8Q3BBV2 869 aa5.93□□□□□ -1.46
ABCD3-205ENST00000484213 NBPF14Q5TI25 921 aa5.93□□□□□ -1.46
ABCD3-205ENST00000484213 TRPM2O94759 1503 aa5.93□□□□□ -1.46
ABCD3-205ENST00000484213 RNF17Q9BXT8 1623 aaKnown RBP5.93□□□□□ -1.46
ABCD3-205ENST00000484213 INO80Q9ULG1 1556 aaPredicted RBP5.93□□□□□ -1.46
ABCD3-205ENST00000484213 WASHC2AQ641Q2 1341 aa5.93□□□□□ -1.46
ABCD3-205ENST00000484213 HS6ST3Q8IZP7 471 aa5.93□□□□□ -1.46
ABCD3-205ENST00000484213 TRPC5Q9UL62 973 aaPredicted RBP5.93□□□□□ -1.46
ABCD3-205ENST00000484213 TIAM1Q13009 1591 aa5.92□□□□□ -1.46
ABCD3-205ENST00000484213 ERVK-7P63135 1459 aa5.92□□□□□ -1.46
ABCD3-205ENST00000484213 ANKRD50Q9ULJ7 1429 aa5.92□□□□□ -1.46
ABCD3-205ENST00000484213 BAG6P46379 1132 aa5.92□□□□□ -1.46
ABCD3-205ENST00000484213 LMTK2Q8IWU2 1503 aa5.92□□□□□ -1.46
ABCD3-205ENST00000484213 CEBPAP49715 358 aaPredicted RBP5.91□□□□□ -1.46
ABCD3-205ENST00000484213 RBM6P78332 1123 aaKnown RBP5.91□□□□□ -1.46
ABCD3-205ENST00000484213 CDCA7Q9BWT1 371 aaPredicted RBP5.91□□□□□ -1.46
ABCD3-205ENST00000484213 DHX57Q6P158 1386 aaKnown RBP5.91□□□□□ -1.46
ABCD3-205ENST00000484213 FRMPD1Q5SYB0 1578 aa5.91□□□□□ -1.46
ABCD3-205ENST00000484213 KDM5AP29375 1690 aaKnown RBP5.91□□□□□ -1.46
ABCD3-205ENST00000484213 TMEM132AQ24JP5 1023 aa5.91□□□□□ -1.46
ABCD3-205ENST00000484213 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.91□□□□□ -1.461e-7■■□□□ 12.8
ABCD3-205ENST00000484213 SEMA3EO15041 775 aa5.91□□□□□ -1.46
ABCD3-205ENST00000484213 MAP3K7O43318 606 aa5.91□□□□□ -1.46
ABCD3-205ENST00000484213 PRKAR2AP13861 404 aaKnown RBP5.91□□□□□ -1.46
ABCD3-205ENST00000484213 PTCH1Q13635 1447 aa5.91□□□□□ -1.46
ABCD3-205ENST00000484213 ARHGEF10O15013 1369 aa5.9□□□□□ -1.46
ABCD3-205ENST00000484213 CDCA8Q53HL2 280 aa5.9□□□□□ -1.46
ABCD3-205ENST00000484213 C3orf67Q6ZVT6 689 aa5.9□□□□□ -1.46
ABCD3-205ENST00000484213 SIRT1Q96EB6 747 aa5.9□□□□□ -1.46
ABCD3-205ENST00000484213 POGKQ9P215 609 aa5.9□□□□□ -1.46
ABCD3-205ENST00000484213 MAP10Q9P2G4 905 aa5.9□□□□□ -1.46
ABCD3-205ENST00000484213 CDK12Q9NYV4 1490 aaPredicted RBP5.9□□□□□ -1.46
ABCD3-205ENST00000484213 RIMS2Q9UQ26 1411 aa5.9□□□□□ -1.47
ABCD3-205ENST00000484213 DDX27Q96GQ7 796 aaKnown RBP5.89□□□□□ -1.47
ABCD3-205ENST00000484213 POLR3EQ9NVU0 708 aa5.89□□□□□ -1.47
ABCD3-205ENST00000484213 NUP155O75694 1391 aa5.89□□□□□ -1.47
ABCD3-205ENST00000484213 GPBP1L1Q9HC44 474 aaPredicted RBP5.89□□□□□ -1.47
ABCD3-205ENST00000484213 ABCA6Q8N139 1617 aa5.89□□□□□ -1.47
ABCD3-205ENST00000484213 ADGRL2O95490 1459 aa5.88□□□□□ -1.47
ABCD3-205ENST00000484213 RRP7BPQ9NSQ0 103 aa5.88□□□□□ -1.47
ABCD3-205ENST00000484213 HAX1O00165 279 aa5.88□□□□□ -1.47
ABCD3-205ENST00000484213 DDX12PQ92771 950 aa5.88□□□□□ -1.47
ABCD3-205ENST00000484213 TMEM106CQ9BVX2 250 aa5.88□□□□□ -1.47
ABCD3-205ENST00000484213 SLAIN2Q9P270 581 aa5.88□□□□□ -1.47
ABCD3-205ENST00000484213 SLIT1O75093 1534 aa5.88□□□□□ -1.47
ABCD3-205ENST00000484213 A0A0G2JS52 829 aa5.88□□□□□ -1.47
ABCD3-205ENST00000484213 RBM25P49756 843 aaKnown RBP5.88□□□□□ -1.47
ABCD3-205ENST00000484213 AGERQ15109 404 aa5.88□□□□□ -1.47
ABCD3-205ENST00000484213 NUTM1Q86Y26 1132 aa5.87□□□□□ -1.47
ABCD3-205ENST00000484213 ADGRB3O60242 1522 aa5.87□□□□□ -1.47
ABCD3-205ENST00000484213 HRCP23327 699 aa5.87□□□□□ -1.47
ABCD3-205ENST00000484213 ABL2P42684 1182 aa5.87□□□□□ -1.47
ABCD3-205ENST00000484213 TTC16Q8NEE8 873 aa5.87□□□□□ -1.47
ABCD3-205ENST00000484213 GOLGA8CPA6NN73 597 aa5.86□□□□□ -1.47
ABCD3-205ENST00000484213 C3P01024 1663 aa5.86□□□□□ -1.47
ABCD3-205ENST00000484213 PARD3Q8TEW0 1356 aa5.86□□□□□ -1.47
ABCD3-205ENST00000484213 ZNF335Q9H4Z2 1342 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms