RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, human

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP50-215	ENST00000484186	HRC	P23327	699 aa		13.91	□□□□□ -0.18
NUP50-215	ENST00000484186	C14orf93	Q9H972	538 aa	Known RBP	13.91	□□□□□ -0.18
NUP50-215	ENST00000484186	TECPR2	O15040	1411 aa		13.9	□□□□□ -0.19
NUP50-215	ENST00000484186	SOS2	Q07890	1332 aa	Predicted RBP	13.9	□□□□□ -0.19
NUP50-215	ENST00000484186	PNPLA6	Q8IY17	1366 aa		13.89	□□□□□ -0.19
NUP50-215	ENST00000484186	ESCO1	Q5FWF5	840 aa		13.89	□□□□□ -0.19
NUP50-215	ENST00000484186	SIRT1	Q96EB6	747 aa		13.89	□□□□□ -0.19
NUP50-215	ENST00000484186	CFAP70	Q5T0N1	1121 aa		13.88	□□□□□ -0.19
NUP50-215	ENST00000484186	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.88	□□□□□ -0.19
NUP50-215	ENST00000484186	PLEKHH1	Q9ULM0	1364 aa		13.87	□□□□□ -0.19
NUP50-215	ENST00000484186	NRXN1	Q9ULB1	1477 aa		13.87	□□□□□ -0.19
NUP50-215	ENST00000484186	LAMC1	P11047	1609 aa		13.86	□□□□□ -0.19
NUP50-215	ENST00000484186	DHX57	Q6P158	1386 aa	Known RBP	13.86	□□□□□ -0.19
NUP50-215	ENST00000484186	CDC42BPG	Q6DT37	1551 aa		13.86	□□□□□ -0.19
NUP50-215	ENST00000484186	AFF2	P51816	1311 aa		13.86	□□□□□ -0.19
NUP50-215	ENST00000484186	NPHP3	Q7Z494	1330 aa		13.86	□□□□□ -0.19
NUP50-215	ENST00000484186	MYOM2	P54296	1465 aa		13.86	□□□□□ -0.19
NUP50-215	ENST00000484186	NUTM2F	A1L443	756 aa		13.85	□□□□□ -0.19
NUP50-215	ENST00000484186	RXRB	P28702	533 aa		13.85	□□□□□ -0.19
NUP50-215	ENST00000484186	C8orf37	Q96NL8	207 aa		13.85	□□□□□ -0.19
NUP50-215	ENST00000484186	FOXO3	O43524	673 aa		13.84	□□□□□ -0.19
NUP50-215	ENST00000484186	KNDC1	Q76NI1	1749 aa		13.84	□□□□□ -0.19
NUP50-215	ENST00000484186	ADAMTS2	O95450	1211 aa		13.83	□□□□□ -0.2
NUP50-215	ENST00000484186	DCAF11	Q8TEB1	546 aa		13.82	□□□□□ -0.2
NUP50-215	ENST00000484186	NGLY1	Q96IV0	654 aa		13.82	□□□□□ -0.2
NUP50-215	ENST00000484186	STAC3	Q96MF2	364 aa		13.82	□□□□□ -0.2
NUP50-215	ENST00000484186	QTRT2	Q9H974	415 aa	Known RBP	13.82	□□□□□ -0.2
NUP50-215	ENST00000484186	KDM2A	Q9Y2K7	1162 aa		13.82	□□□□□ -0.2
NUP50-215	ENST00000484186	XPC	Q01831	940 aa	Predicted RBP	13.81	□□□□□ -0.2
NUP50-215	ENST00000484186	PRAM1	Q96QH2	718 aa		13.81	□□□□□ -0.2
NUP50-215	ENST00000484186	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
NUP50-215	ENST00000484186	POGK	Q9P215	609 aa		13.8	□□□□□ -0.2
NUP50-215	ENST00000484186	PXDN	Q92626	1479 aa		13.79	□□□□□ -0.2
NUP50-215	ENST00000484186	RBM6	P78332	1123 aa	Known RBP	13.78	□□□□□ -0.2
NUP50-215	ENST00000484186	TRAK1	Q9UPV9	953 aa		13.78	□□□□□ -0.2
NUP50-215	ENST00000484186	FMN2	Q9NZ56	1722 aa		13.78	□□□□□ -0.2
NUP50-215	ENST00000484186	KRT28	Q7Z3Y7	464 aa		13.77	□□□□□ -0.21
NUP50-215	ENST00000484186	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.77	□□□□□ -0.21
NUP50-215	ENST00000484186	DLC1	Q96QB1	1528 aa		13.77	□□□□□ -0.21
NUP50-215	ENST00000484186	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.77	□□□□□ -0.21
NUP50-215	ENST00000484186	USP21	Q9UK80	565 aa		13.77	□□□□□ -0.21
NUP50-215	ENST00000484186	PHF8	Q9UPP1	1060 aa		13.77	□□□□□ -0.21
NUP50-215	ENST00000484186	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.76	□□□□□ -0.21
NUP50-215	ENST00000484186	ADGRB1	O14514	1584 aa		13.76	□□□□□ -0.21
NUP50-215	ENST00000484186	SPATA31A3	Q5VYP0	1347 aa		13.75	□□□□□ -0.21
NUP50-215	ENST00000484186	PSME1	Q06323	249 aa		13.75	□□□□□ -0.21
NUP50-215	ENST00000484186	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
NUP50-215	ENST00000484186	TRPC5	Q9UL62	973 aa	Predicted RBP	13.75	□□□□□ -0.21
NUP50-215	ENST00000484186	KIF1A	Q12756	1690 aa		13.74	□□□□□ -0.21
NUP50-215	ENST00000484186	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.73	□□□□□ -0.21
NUP50-215	ENST00000484186	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.72	□□□□□ -0.21
NUP50-215	ENST00000484186	PMFBP1	Q8TBY8	1022 aa		13.72	□□□□□ -0.21
NUP50-215	ENST00000484186	ANKAR	Q7Z5J8	1434 aa		13.72	□□□□□ -0.21
NUP50-215	ENST00000484186	RGPD8	O14715	1765 aa	Predicted RBP	13.71	□□□□□ -0.21
NUP50-215	ENST00000484186	WASL	O00401	505 aa	Predicted RBP	13.71	□□□□□ -0.21
NUP50-215	ENST00000484186	RGS12	O14924	1447 aa		13.71	□□□□□ -0.22
NUP50-215	ENST00000484186	SBNO1	A3KN83	1393 aa		13.71	□□□□□ -0.22
NUP50-215	ENST00000484186	ATRN	O75882	1429 aa		13.7	□□□□□ -0.22
NUP50-215	ENST00000484186	ADGRB2	O60241	1585 aa		13.7	□□□□□ -0.22
NUP50-215	ENST00000484186	BCL9L	Q86UU0	1499 aa		13.69	□□□□□ -0.22
NUP50-215	ENST00000484186	LMOD2	Q6P5Q4	547 aa		13.69	□□□□□ -0.22
NUP50-215	ENST00000484186	TNS3	Q68CZ2	1445 aa		13.69	□□□□□ -0.22
NUP50-215	ENST00000484186	EIF3A	Q14152	1382 aa	Known RBP	13.69	□□□□□ -0.22
NUP50-215	ENST00000484186	PRR36	Q9H6K5	1346 aa		13.68	□□□□□ -0.22
NUP50-215	ENST00000484186	HAP1	P54257	671 aa	Predicted RBP	13.68	□□□□□ -0.22
NUP50-215	ENST00000484186	USP32	Q8NFA0	1604 aa		13.68	□□□□□ -0.22
NUP50-215	ENST00000484186	UNC5CL	Q8IV45	518 aa		13.67	□□□□□ -0.22
NUP50-215	ENST00000484186	CABLES1	Q8TDN4	633 aa		13.67	□□□□□ -0.22
NUP50-215	ENST00000484186	GJD4	Q96KN9	370 aa	Predicted RBP	13.67	□□□□□ -0.22
NUP50-215	ENST00000484186	ARHGEF10	O15013	1369 aa		13.67	□□□□□ -0.22
NUP50-215	ENST00000484186	MARF1	Q9Y4F3	1742 aa	Known RBP	13.67	□□□□□ -0.22
NUP50-215	ENST00000484186	PLEKHG5	O94827	1062 aa		13.66	□□□□□ -0.22
NUP50-215	ENST00000484186	GPRASP1	Q5JY77	1395 aa		13.66	□□□□□ -0.22
NUP50-215	ENST00000484186	SLIT2	O94813	1529 aa		13.65	□□□□□ -0.22
NUP50-215	ENST00000484186	TULP4	Q9NRJ4	1543 aa		13.65	□□□□□ -0.22
NUP50-215	ENST00000484186	NBPF1	Q3BBV0	1214 aa		13.65	□□□□□ -0.22
NUP50-215	ENST00000484186	NGDN	Q8NEJ9	315 aa	Known RBP	13.65	□□□□□ -0.22
NUP50-215	ENST00000484186	NUDT16	Q96DE0	195 aa	Known RBP	13.64	□□□□□ -0.23
NUP50-215	ENST00000484186	CDK19	Q9BWU1	502 aa		13.64	□□□□□ -0.23
NUP50-215	ENST00000484186	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.62	□□□□□ -0.23
NUP50-215	ENST00000484186	KIAA1210	Q9ULL0	1709 aa		13.62	□□□□□ -0.23
NUP50-215	ENST00000484186	ATAD2	Q6PL18	1390 aa		13.62	□□□□□ -0.23
NUP50-215	ENST00000484186	FAM83G	A6ND36	823 aa		13.61	□□□□□ -0.23
NUP50-215	ENST00000484186	PAK3	O75914	559 aa	Predicted RBP	13.61	□□□□□ -0.23
NUP50-215	ENST00000484186	VPS72	Q15906	364 aa		13.61	□□□□□ -0.23
NUP50-215	ENST00000484186	L3MBTL2	Q969R5	705 aa		13.61	□□□□□ -0.23
NUP50-215	ENST00000484186	SIN3A	Q96ST3	1273 aa		13.61	□□□□□ -0.23
NUP50-215	ENST00000484186	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.6	□□□□□ -0.23
NUP50-215	ENST00000484186	CCDC61	Q9Y6R9	512 aa		13.6	□□□□□ -0.23
NUP50-215	ENST00000484186	ATP7B	P35670	1465 aa		13.6	□□□□□ -0.23
NUP50-215	ENST00000484186	RALGAPB	Q86X10	1494 aa		13.6	□□□□□ -0.23
NUP50-215	ENST00000484186	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.59	□□□□□ -0.23
NUP50-215	ENST00000484186	PLEKHG3	A1L390	1219 aa		13.58	□□□□□ -0.24
NUP50-215	ENST00000484186	NEUROD1	Q13562	356 aa		13.58	□□□□□ -0.24
NUP50-215	ENST00000484186	CCDC9	Q9Y3X0	531 aa	Known RBP	13.58	□□□□□ -0.24
NUP50-215	ENST00000484186	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.58	□□□□□ -0.24
NUP50-215	ENST00000484186	GLI3	P10071	1580 aa		13.58	□□□□□ -0.24
NUP50-215	ENST00000484186	ALS2	Q96Q42	1657 aa		13.57	□□□□□ -0.24
NUP50-215	ENST00000484186	NBPF8	Q3BBV2	869 aa		13.57	□□□□□ -0.24
NUP50-215	ENST00000484186	CCDC125	Q86Z20	511 aa		13.57	□□□□□ -0.24

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