RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 HRCP23327 699 aa13.91□□□□□ -0.18
NUP50-215ENST00000484186 C14orf93Q9H972 538 aaKnown RBP13.91□□□□□ -0.18
NUP50-215ENST00000484186 TECPR2O15040 1411 aa13.9□□□□□ -0.19
NUP50-215ENST00000484186 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.19
NUP50-215ENST00000484186 PNPLA6Q8IY17 1366 aa13.89□□□□□ -0.19
NUP50-215ENST00000484186 ESCO1Q5FWF5 840 aa13.89□□□□□ -0.19
NUP50-215ENST00000484186 SIRT1Q96EB6 747 aa13.89□□□□□ -0.19
NUP50-215ENST00000484186 CFAP70Q5T0N1 1121 aa13.88□□□□□ -0.19
NUP50-215ENST00000484186 YTHDC2Q9H6S0 1430 aaKnown RBP13.88□□□□□ -0.19
NUP50-215ENST00000484186 PLEKHH1Q9ULM0 1364 aa13.87□□□□□ -0.19
NUP50-215ENST00000484186 NRXN1Q9ULB1 1477 aa13.87□□□□□ -0.19
NUP50-215ENST00000484186 LAMC1P11047 1609 aa13.86□□□□□ -0.19
NUP50-215ENST00000484186 DHX57Q6P158 1386 aaKnown RBP13.86□□□□□ -0.19
NUP50-215ENST00000484186 CDC42BPGQ6DT37 1551 aa13.86□□□□□ -0.19
NUP50-215ENST00000484186 AFF2P51816 1311 aa13.86□□□□□ -0.19
NUP50-215ENST00000484186 NPHP3Q7Z494 1330 aa13.86□□□□□ -0.19
NUP50-215ENST00000484186 MYOM2P54296 1465 aa13.86□□□□□ -0.19
NUP50-215ENST00000484186 NUTM2FA1L443 756 aa13.85□□□□□ -0.19
NUP50-215ENST00000484186 RXRBP28702 533 aa13.85□□□□□ -0.19
NUP50-215ENST00000484186 C8orf37Q96NL8 207 aa13.85□□□□□ -0.19
NUP50-215ENST00000484186 FOXO3O43524 673 aa13.84□□□□□ -0.19
NUP50-215ENST00000484186 KNDC1Q76NI1 1749 aa13.84□□□□□ -0.19
NUP50-215ENST00000484186 ADAMTS2O95450 1211 aa13.83□□□□□ -0.2
NUP50-215ENST00000484186 DCAF11Q8TEB1 546 aa13.82□□□□□ -0.2
NUP50-215ENST00000484186 NGLY1Q96IV0 654 aa13.82□□□□□ -0.2
NUP50-215ENST00000484186 STAC3Q96MF2 364 aa13.82□□□□□ -0.2
NUP50-215ENST00000484186 QTRT2Q9H974 415 aaKnown RBP13.82□□□□□ -0.2
NUP50-215ENST00000484186 KDM2AQ9Y2K7 1162 aa13.82□□□□□ -0.2
NUP50-215ENST00000484186 XPCQ01831 940 aaPredicted RBP13.81□□□□□ -0.2
NUP50-215ENST00000484186 PRAM1Q96QH2 718 aa13.81□□□□□ -0.2
NUP50-215ENST00000484186 SAFB2Q14151 953 aaKnown RBP eCLIP13.8□□□□□ -0.2
NUP50-215ENST00000484186 POGKQ9P215 609 aa13.8□□□□□ -0.2
NUP50-215ENST00000484186 PXDNQ92626 1479 aa13.79□□□□□ -0.2
NUP50-215ENST00000484186 RBM6P78332 1123 aaKnown RBP13.78□□□□□ -0.2
NUP50-215ENST00000484186 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
NUP50-215ENST00000484186 FMN2Q9NZ56 1722 aa13.78□□□□□ -0.2
NUP50-215ENST00000484186 KRT28Q7Z3Y7 464 aa13.77□□□□□ -0.21
NUP50-215ENST00000484186 FNBP4Q8N3X1 1017 aaPredicted RBP13.77□□□□□ -0.21
NUP50-215ENST00000484186 DLC1Q96QB1 1528 aa13.77□□□□□ -0.21
NUP50-215ENST00000484186 CDK12Q9NYV4 1490 aaPredicted RBP13.77□□□□□ -0.21
NUP50-215ENST00000484186 USP21Q9UK80 565 aa13.77□□□□□ -0.21
NUP50-215ENST00000484186 PHF8Q9UPP1 1060 aa13.77□□□□□ -0.21
NUP50-215ENST00000484186 COL22A1Q8NFW1 1626 aaPredicted RBP13.76□□□□□ -0.21
NUP50-215ENST00000484186 ADGRB1O14514 1584 aa13.76□□□□□ -0.21
NUP50-215ENST00000484186 SPATA31A3Q5VYP0 1347 aa13.75□□□□□ -0.21
NUP50-215ENST00000484186 PSME1Q06323 249 aa13.75□□□□□ -0.21
NUP50-215ENST00000484186 UPF1Q92900 1129 aaKnown RBP eCLIP13.75□□□□□ -0.21
NUP50-215ENST00000484186 TRPC5Q9UL62 973 aaPredicted RBP13.75□□□□□ -0.21
NUP50-215ENST00000484186 KIF1AQ12756 1690 aa13.74□□□□□ -0.21
NUP50-215ENST00000484186 HIRIP3Q9BW71 556 aaPredicted RBP13.73□□□□□ -0.21
NUP50-215ENST00000484186 MINK1Q8N4C8 1332 aaPredicted RBP13.72□□□□□ -0.21
NUP50-215ENST00000484186 PMFBP1Q8TBY8 1022 aa13.72□□□□□ -0.21
NUP50-215ENST00000484186 ANKARQ7Z5J8 1434 aa13.72□□□□□ -0.21
NUP50-215ENST00000484186 RGPD8O14715 1765 aaPredicted RBP13.71□□□□□ -0.21
NUP50-215ENST00000484186 WASLO00401 505 aaPredicted RBP13.71□□□□□ -0.21
NUP50-215ENST00000484186 RGS12O14924 1447 aa13.71□□□□□ -0.22
NUP50-215ENST00000484186 SBNO1A3KN83 1393 aa13.71□□□□□ -0.22
NUP50-215ENST00000484186 ATRNO75882 1429 aa13.7□□□□□ -0.22
NUP50-215ENST00000484186 ADGRB2O60241 1585 aa13.7□□□□□ -0.22
NUP50-215ENST00000484186 BCL9LQ86UU0 1499 aa13.69□□□□□ -0.22
NUP50-215ENST00000484186 LMOD2Q6P5Q4 547 aa13.69□□□□□ -0.22
NUP50-215ENST00000484186 TNS3Q68CZ2 1445 aa13.69□□□□□ -0.22
NUP50-215ENST00000484186 EIF3AQ14152 1382 aaKnown RBP13.69□□□□□ -0.22
NUP50-215ENST00000484186 PRR36Q9H6K5 1346 aa13.68□□□□□ -0.22
NUP50-215ENST00000484186 HAP1P54257 671 aaPredicted RBP13.68□□□□□ -0.22
NUP50-215ENST00000484186 USP32Q8NFA0 1604 aa13.68□□□□□ -0.22
NUP50-215ENST00000484186 UNC5CLQ8IV45 518 aa13.67□□□□□ -0.22
NUP50-215ENST00000484186 CABLES1Q8TDN4 633 aa13.67□□□□□ -0.22
NUP50-215ENST00000484186 GJD4Q96KN9 370 aaPredicted RBP13.67□□□□□ -0.22
NUP50-215ENST00000484186 ARHGEF10O15013 1369 aa13.67□□□□□ -0.22
NUP50-215ENST00000484186 MARF1Q9Y4F3 1742 aaKnown RBP13.67□□□□□ -0.22
NUP50-215ENST00000484186 PLEKHG5O94827 1062 aa13.66□□□□□ -0.22
NUP50-215ENST00000484186 GPRASP1Q5JY77 1395 aa13.66□□□□□ -0.22
NUP50-215ENST00000484186 SLIT2O94813 1529 aa13.65□□□□□ -0.22
NUP50-215ENST00000484186 TULP4Q9NRJ4 1543 aa13.65□□□□□ -0.22
NUP50-215ENST00000484186 NBPF1Q3BBV0 1214 aa13.65□□□□□ -0.22
NUP50-215ENST00000484186 NGDNQ8NEJ9 315 aaKnown RBP13.65□□□□□ -0.22
NUP50-215ENST00000484186 NUDT16Q96DE0 195 aaKnown RBP13.64□□□□□ -0.23
NUP50-215ENST00000484186 CDK19Q9BWU1 502 aa13.64□□□□□ -0.23
NUP50-215ENST00000484186 ARHGEF28Q8N1W1 1705 aaKnown RBP13.62□□□□□ -0.23
NUP50-215ENST00000484186 KIAA1210Q9ULL0 1709 aa13.62□□□□□ -0.23
NUP50-215ENST00000484186 ATAD2Q6PL18 1390 aa13.62□□□□□ -0.23
NUP50-215ENST00000484186 FAM83GA6ND36 823 aa13.61□□□□□ -0.23
NUP50-215ENST00000484186 PAK3O75914 559 aaPredicted RBP13.61□□□□□ -0.23
NUP50-215ENST00000484186 VPS72Q15906 364 aa13.61□□□□□ -0.23
NUP50-215ENST00000484186 L3MBTL2Q969R5 705 aa13.61□□□□□ -0.23
NUP50-215ENST00000484186 SIN3AQ96ST3 1273 aa13.61□□□□□ -0.23
NUP50-215ENST00000484186 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.6□□□□□ -0.23
NUP50-215ENST00000484186 CCDC61Q9Y6R9 512 aa13.6□□□□□ -0.23
NUP50-215ENST00000484186 ATP7BP35670 1465 aa13.6□□□□□ -0.23
NUP50-215ENST00000484186 RALGAPBQ86X10 1494 aa13.6□□□□□ -0.23
NUP50-215ENST00000484186 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
NUP50-215ENST00000484186 PLEKHG3A1L390 1219 aa13.58□□□□□ -0.24
NUP50-215ENST00000484186 NEUROD1Q13562 356 aa13.58□□□□□ -0.24
NUP50-215ENST00000484186 CCDC9Q9Y3X0 531 aaKnown RBP13.58□□□□□ -0.24
NUP50-215ENST00000484186 CENPJQ9HC77 1338 aaPredicted RBP13.58□□□□□ -0.24
NUP50-215ENST00000484186 GLI3P10071 1580 aa13.58□□□□□ -0.24
NUP50-215ENST00000484186 ALS2Q96Q42 1657 aa13.57□□□□□ -0.24
NUP50-215ENST00000484186 NBPF8Q3BBV2 869 aa13.57□□□□□ -0.24
NUP50-215ENST00000484186 CCDC125Q86Z20 511 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms