RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 C14orf37Q86TY3 774 aa21.57■■□□□ 1.04
CCM2-215ENST00000482714 IQSEC2Q5JU85 1478 aa21.56■■□□□ 1.04
CCM2-215ENST00000482714 PLEKHH1Q9ULM0 1364 aa21.55■■□□□ 1.04
CCM2-215ENST00000482714 CADPS2Q86UW7 1296 aa21.54■■□□□ 1.04
CCM2-215ENST00000482714 MSH6P52701 1360 aa21.54■■□□□ 1.04
CCM2-215ENST00000482714 SAFB2Q14151 953 aaKnown RBP eCLIP21.53■■□□□ 1.045e-8■■■□□ 18
CCM2-215ENST00000482714 ADGRL3Q9HAR2 1447 aa21.53■■□□□ 1.04
CCM2-215ENST00000482714 ARHGEF28Q8N1W1 1705 aaKnown RBP21.52■■□□□ 1.04
CCM2-215ENST00000482714 RBM33Q96EV2 1170 aaKnown RBP21.52■■□□□ 1.04
CCM2-215ENST00000482714 PUS7Q96PZ0 661 aaKnown RBP21.52■■□□□ 1.04
CCM2-215ENST00000482714 DCCP43146 1447 aa21.52■■□□□ 1.03
CCM2-215ENST00000482714 ATF3P18847 181 aa21.52■■□□□ 1.03
CCM2-215ENST00000482714 TESK2Q96S53 571 aa21.52■■□□□ 1.03
CCM2-215ENST00000482714 WASLO00401 505 aaPredicted RBP21.51■■□□□ 1.03
CCM2-215ENST00000482714 HSPA5P11021 654 aaKnown RBP21.51■■□□□ 1.03
CCM2-215ENST00000482714 EVC2Q86UK5 1308 aa21.5■■□□□ 1.03
CCM2-215ENST00000482714 MINK1Q8N4C8 1332 aaPredicted RBP21.5■■□□□ 1.03
CCM2-215ENST00000482714 TOM1O60784 492 aa21.48■■□□□ 1.03
CCM2-215ENST00000482714 TMF1P82094 1093 aa21.48■■□□□ 1.03
CCM2-215ENST00000482714 CDCA8Q53HL2 280 aa21.48■■□□□ 1.03
CCM2-215ENST00000482714 CDK19Q9BWU1 502 aa21.46■■□□□ 1.03
CCM2-215ENST00000482714 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.46■■□□□ 1.03
CCM2-215ENST00000482714 HIRIP3Q9BW71 556 aaPredicted RBP21.45■■□□□ 1.02
CCM2-215ENST00000482714 XIRP1Q702N8 1843 aaKnown RBP21.44■■□□□ 1.02
CCM2-215ENST00000482714 SLAIN2Q9P270 581 aa21.44■■□□□ 1.02
CCM2-215ENST00000482714 ADGRB2O60241 1585 aa21.43■■□□□ 1.02
CCM2-215ENST00000482714 UBAP1LF5GYI3 381 aa21.43■■□□□ 1.02
CCM2-215ENST00000482714 CDC42BPGQ6DT37 1551 aa21.42■■□□□ 1.02
CCM2-215ENST00000482714 CCDC61Q9Y6R9 512 aa21.41■■□□□ 1.02
CCM2-215ENST00000482714 QRICH2Q9H0J4 1663 aa21.41■■□□□ 1.02
CCM2-215ENST00000482714 SRPK2P78362 688 aaKnown RBP21.4■■□□□ 1.02
CCM2-215ENST00000482714 ANKARQ7Z5J8 1434 aa21.39■■□□□ 1.02
CCM2-215ENST00000482714 NALCNQ8IZF0 1738 aa21.39■■□□□ 1.01
CCM2-215ENST00000482714 NUDT16Q96DE0 195 aaKnown RBP21.39■■□□□ 1.01
CCM2-215ENST00000482714 ATAD2Q6PL18 1390 aa21.37■■□□□ 1.01
CCM2-215ENST00000482714 CABP2Q9NPB3 220 aa21.36■■□□□ 1.01
CCM2-215ENST00000482714 MST1RQ04912 1400 aa21.35■■□□□ 1.01
CCM2-215ENST00000482714 C1orf167Q5SNV9 1468 aa21.35■■□□□ 1.01
CCM2-215ENST00000482714 PLEKHG3A1L390 1219 aa21.34■■□□□ 1.01
CCM2-215ENST00000482714 TULP4Q9NRJ4 1543 aa21.34■■□□□ 1.01
CCM2-215ENST00000482714 NUTM2FA1L443 756 aa21.32■■□□□ 1
CCM2-215ENST00000482714 ESCO1Q5FWF5 840 aa21.32■■□□□ 1
CCM2-215ENST00000482714 FMN2Q9NZ56 1722 aa21.32■■□□□ 1
CCM2-215ENST00000482714 PRR36Q9H6K5 1346 aa21.32■■□□□ 1
CCM2-215ENST00000482714 DISP3Q9P2K9 1392 aa21.31■■□□□ 1
CCM2-215ENST00000482714 NINLQ9Y2I6 1382 aa21.31■■□□□ 1
CCM2-215ENST00000482714 PHF8Q9UPP1 1060 aa21.31■■□□□ 1
CCM2-215ENST00000482714 ORAI2Q96SN7 254 aa21.3■■□□□ 1
CCM2-215ENST00000482714 C11orf95C9JLR9 678 aaPredicted RBP21.29■■□□□ 1
CCM2-215ENST00000482714 BRINP3Q76B58 766 aa21.29■■□□□ 1
CCM2-215ENST00000482714 ZNF692Q9BU19 519 aaPredicted RBP21.29■■□□□ 1
CCM2-215ENST00000482714 CABP1Q9NZU7 370 aa21.29■■□□□ 1
CCM2-215ENST00000482714 PIP4K2BP78356 416 aa21.28■■□□□ 1
CCM2-215ENST00000482714 ATP7BP35670 1465 aa21.28■■□□□ 1
CCM2-215ENST00000482714 TMC1Q8TDI8 760 aa21.26■□□□□ 0.99
CCM2-215ENST00000482714 KIF7Q2M1P5 1343 aa21.25■□□□□ 0.99
CCM2-215ENST00000482714 NGDNQ8NEJ9 315 aaKnown RBP21.25■□□□□ 0.99
CCM2-215ENST00000482714 SLC12A5Q9H2X9 1139 aa21.25■□□□□ 0.99
CCM2-215ENST00000482714 TERF2IPQ9NYB0 399 aa21.25■□□□□ 0.99
CCM2-215ENST00000482714 PPIP5K1Q6PFW1 1433 aa21.25■□□□□ 0.99
CCM2-215ENST00000482714 SCAF1Q9H7N4 1312 aaKnown RBP21.24■□□□□ 0.99
CCM2-215ENST00000482714 ZNF316A6NFI3 1004 aaPredicted RBP21.24■□□□□ 0.99
CCM2-215ENST00000482714 NPHP3Q7Z494 1330 aa21.24■□□□□ 0.99
CCM2-215ENST00000482714 POLR3AO14802 1390 aaPredicted RBP21.23■□□□□ 0.99
CCM2-215ENST00000482714 PSME1Q06323 249 aa21.23■□□□□ 0.99
CCM2-215ENST00000482714 PMFBP1Q8TBY8 1022 aa21.23■□□□□ 0.99
CCM2-215ENST00000482714 USP32Q8NFA0 1604 aa21.23■□□□□ 0.99
CCM2-215ENST00000482714 WASHC2AQ641Q2 1341 aa21.23■□□□□ 0.99
CCM2-215ENST00000482714 BRD4O60885 1362 aaPredicted RBP21.22■□□□□ 0.99
CCM2-215ENST00000482714 CCDC7Q96M83 1385 aa21.22■□□□□ 0.99
CCM2-215ENST00000482714 FOXO3O43524 673 aa21.22■□□□□ 0.99
CCM2-215ENST00000482714 ACEP12821 1306 aa21.22■□□□□ 0.99
CCM2-215ENST00000482714 HDGFL2Q7Z4V5 671 aaPredicted RBP21.21■□□□□ 0.99
CCM2-215ENST00000482714 ITSN1Q15811 1721 aa21.21■□□□□ 0.99
CCM2-215ENST00000482714 HSPA1LP34931 641 aa21.2■□□□□ 0.98
CCM2-215ENST00000482714 POLR3GLQ9BT43 218 aa21.2■□□□□ 0.98
CCM2-215ENST00000482714 RGPD8O14715 1765 aaPredicted RBP21.19■□□□□ 0.98
CCM2-215ENST00000482714 KIF1AQ12756 1690 aa21.19■□□□□ 0.98
CCM2-215ENST00000482714 KRT28Q7Z3Y7 464 aa21.19■□□□□ 0.98
CCM2-215ENST00000482714 CPSF1Q10570 1443 aaKnown RBP21.18■□□□□ 0.98
CCM2-215ENST00000482714 SOS2Q07890 1332 aaPredicted RBP21.18■□□□□ 0.98
CCM2-215ENST00000482714 TOPAZ1Q8N9V7 1692 aa21.17■□□□□ 0.98
CCM2-215ENST00000482714 ANKRD36BQ8N2N9 1353 aa21.16■□□□□ 0.98
CCM2-215ENST00000482714 LRRC59Q96AG4 307 aaKnown RBP21.16■□□□□ 0.98
CCM2-215ENST00000482714 ROBO1Q9Y6N7 1651 aa21.15■□□□□ 0.98
CCM2-215ENST00000482714 SBNO1A3KN83 1393 aa21.14■□□□□ 0.97
CCM2-215ENST00000482714 PANK3Q9H999 370 aa21.13■□□□□ 0.97
CCM2-215ENST00000482714 KTN1Q86UP2 1357 aaKnown RBP21.13■□□□□ 0.97
CCM2-215ENST00000482714 CD163L1Q9NR16 1453 aa21.12■□□□□ 0.97
CCM2-215ENST00000482714 USP6P35125 1406 aa21.11■□□□□ 0.97
CCM2-215ENST00000482714 AHDC1Q5TGY3 1603 aaPredicted RBP21.11■□□□□ 0.97
CCM2-215ENST00000482714 TTC21AQ8NDW8 1320 aa21.11■□□□□ 0.97
CCM2-215ENST00000482714 A0A1W2PP64 1363 aa21.1■□□□□ 0.97
CCM2-215ENST00000482714 DDX17Q92841 729 aaKnown RBP21.09■□□□□ 0.97
CCM2-215ENST00000482714 SSH2Q76I76 1423 aa21.09■□□□□ 0.97
CCM2-215ENST00000482714 SPATA31A3Q5VYP0 1347 aa21.09■□□□□ 0.97
CCM2-215ENST00000482714 TTC21BQ7Z4L5 1316 aa21.09■□□□□ 0.97
CCM2-215ENST00000482714 EDC4Q6P2E9 1401 aaKnown RBP21.08■□□□□ 0.97
CCM2-215ENST00000482714 CARD14Q9BXL6 1004 aa21.08■□□□□ 0.97
CCM2-215ENST00000482714 NHSL1Q5SYE7 1610 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms