RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 C19orf44Q9H6X5 657 aa19.09■□□□□ 0.65
SNRNP200-204ENST00000480615 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
SNRNP200-204ENST00000480615 IQSEC2Q5JU85 1478 aa19.09■□□□□ 0.65
SNRNP200-204ENST00000480615 ATF3P18847 181 aa19.08■□□□□ 0.65
SNRNP200-204ENST00000480615 PIP4K2BP78356 416 aa19.07■□□□□ 0.64
SNRNP200-204ENST00000480615 SIRT1Q96EB6 747 aa19.07■□□□□ 0.64
SNRNP200-204ENST00000480615 NCOA3Q9Y6Q9 1424 aa19.07■□□□□ 0.64
SNRNP200-204ENST00000480615 QRICH2Q9H0J4 1663 aa19.07■□□□□ 0.64
SNRNP200-204ENST00000480615 CENPJQ9HC77 1338 aaPredicted RBP19.06■□□□□ 0.64
SNRNP200-204ENST00000480615 NUTM2FA1L443 756 aa19.06■□□□□ 0.64
SNRNP200-204ENST00000480615 EIF3AQ14152 1382 aaKnown RBP19.05■□□□□ 0.64
SNRNP200-204ENST00000480615 TOM1O60784 492 aa19.04■□□□□ 0.64
SNRNP200-204ENST00000480615 ZEB1P37275 1124 aaPredicted RBP19.03■□□□□ 0.64
SNRNP200-204ENST00000480615 CADPS2Q86UW7 1296 aa19.03■□□□□ 0.64
SNRNP200-204ENST00000480615 USP47Q96K76 1375 aa19.03■□□□□ 0.64
SNRNP200-204ENST00000480615 CDC42BPGQ6DT37 1551 aa19.02■□□□□ 0.63
SNRNP200-204ENST00000480615 SLAIN2Q9P270 581 aa19.01■□□□□ 0.63
SNRNP200-204ENST00000480615 DCCP43146 1447 aa19■□□□□ 0.63
SNRNP200-204ENST00000480615 ST20-MTHFSA0A0A6YYL1 179 aa19■□□□□ 0.63
SNRNP200-204ENST00000480615 FMN2Q9NZ56 1722 aa18.99■□□□□ 0.63
SNRNP200-204ENST00000480615 ADGRB2O60241 1585 aa18.99■□□□□ 0.63
SNRNP200-204ENST00000480615 RGPD8O14715 1765 aaPredicted RBP18.98■□□□□ 0.63
SNRNP200-204ENST00000480615 MST1RQ04912 1400 aa18.98■□□□□ 0.63
SNRNP200-204ENST00000480615 WASLO00401 505 aaPredicted RBP18.96■□□□□ 0.63
SNRNP200-204ENST00000480615 ROBO1Q9Y6N7 1651 aa18.96■□□□□ 0.63
SNRNP200-204ENST00000480615 CDK19Q9BWU1 502 aa18.96■□□□□ 0.63
SNRNP200-204ENST00000480615 SRPK2P78362 688 aaKnown RBP18.95■□□□□ 0.62
SNRNP200-204ENST00000480615 FBXO41Q8TF61 875 aa18.95■□□□□ 0.62
SNRNP200-204ENST00000480615 C1orf167Q5SNV9 1468 aa18.94■□□□□ 0.62
SNRNP200-204ENST00000480615 ORAI2Q96SN7 254 aa18.94■□□□□ 0.62
SNRNP200-204ENST00000480615 TULP4Q9NRJ4 1543 aa18.94■□□□□ 0.62
SNRNP200-204ENST00000480615 HSPA5P11021 654 aaKnown RBP18.93■□□□□ 0.62
SNRNP200-204ENST00000480615 EIF4G2P78344 907 aaKnown RBP eCLIP18.93■□□□□ 0.62
SNRNP200-204ENST00000480615 ESCO1Q5FWF5 840 aa18.93■□□□□ 0.62
SNRNP200-204ENST00000480615 CABP2Q9NPB3 220 aa18.93■□□□□ 0.62
SNRNP200-204ENST00000480615 USP32Q8NFA0 1604 aa18.92■□□□□ 0.62
SNRNP200-204ENST00000480615 EVC2Q86UK5 1308 aa18.92■□□□□ 0.62
SNRNP200-204ENST00000480615 BRINP3Q76B58 766 aa18.92■□□□□ 0.62
SNRNP200-204ENST00000480615 TESK2Q96S53 571 aa18.91■□□□□ 0.62
SNRNP200-204ENST00000480615 PRR36Q9H6K5 1346 aa18.91■□□□□ 0.62
SNRNP200-204ENST00000480615 DDX17Q92841 729 aaKnown RBP18.9■□□□□ 0.62
SNRNP200-204ENST00000480615 NUDT16Q96DE0 195 aaKnown RBP18.89■□□□□ 0.62
SNRNP200-204ENST00000480615 SBNO2Q9Y2G9 1366 aa18.88■□□□□ 0.61
SNRNP200-204ENST00000480615 PMFBP1Q8TBY8 1022 aa18.88■□□□□ 0.61
SNRNP200-204ENST00000480615 ATP7BP35670 1465 aa18.88■□□□□ 0.61
SNRNP200-204ENST00000480615 DISP3Q9P2K9 1392 aa18.87■□□□□ 0.61
SNRNP200-204ENST00000480615 ANKARQ7Z5J8 1434 aa18.86■□□□□ 0.61
SNRNP200-204ENST00000480615 ITSN1Q15811 1721 aa18.86■□□□□ 0.61
SNRNP200-204ENST00000480615 XPCQ01831 940 aaPredicted RBP18.85■□□□□ 0.61
SNRNP200-204ENST00000480615 ILDR1Q86SU0 546 aaPredicted RBP18.85■□□□□ 0.61
SNRNP200-204ENST00000480615 PHF8Q9UPP1 1060 aa18.85■□□□□ 0.61
SNRNP200-204ENST00000480615 PHLPP1O60346 1717 aa18.85■□□□□ 0.61
SNRNP200-204ENST00000480615 FOXO3O43524 673 aa18.85■□□□□ 0.61
SNRNP200-204ENST00000480615 HSPA1LP34931 641 aa18.85■□□□□ 0.61
SNRNP200-204ENST00000480615 TMF1P82094 1093 aa18.85■□□□□ 0.61
SNRNP200-204ENST00000480615 POLR3GLQ9BT43 218 aa18.85■□□□□ 0.61
SNRNP200-204ENST00000480615 TOPAZ1Q8N9V7 1692 aa18.84■□□□□ 0.61
SNRNP200-204ENST00000480615 PPIP5K1Q6PFW1 1433 aa18.83■□□□□ 0.6
SNRNP200-204ENST00000480615 KIF1AQ12756 1690 aa18.83■□□□□ 0.6
SNRNP200-204ENST00000480615 CCDC61Q9Y6R9 512 aa18.82■□□□□ 0.6
SNRNP200-204ENST00000480615 NGDNQ8NEJ9 315 aaKnown RBP18.82■□□□□ 0.6
SNRNP200-204ENST00000480615 TMC1Q8TDI8 760 aa18.82■□□□□ 0.6
SNRNP200-204ENST00000480615 NHSL1Q5SYE7 1610 aa18.81■□□□□ 0.6
SNRNP200-204ENST00000480615 CABP1Q9NZU7 370 aa18.81■□□□□ 0.6
SNRNP200-204ENST00000480615 SLC24A1O60721 1099 aa18.79■□□□□ 0.6
SNRNP200-204ENST00000480615 AHDC1Q5TGY3 1603 aaPredicted RBP18.79■□□□□ 0.6
SNRNP200-204ENST00000480615 ATAD2Q6PL18 1390 aa18.79■□□□□ 0.6
SNRNP200-204ENST00000480615 PSME1Q06323 249 aa18.78■□□□□ 0.6
SNRNP200-204ENST00000480615 ACEP12821 1306 aa18.78■□□□□ 0.6
SNRNP200-204ENST00000480615 NPHP3Q7Z494 1330 aa18.78■□□□□ 0.6
SNRNP200-204ENST00000480615 C11orf95C9JLR9 678 aaPredicted RBP18.77■□□□□ 0.6
SNRNP200-204ENST00000480615 COL16A1Q07092 1604 aaPredicted RBP18.76■□□□□ 0.59
SNRNP200-204ENST00000480615 KRT28Q7Z3Y7 464 aa18.76■□□□□ 0.59
SNRNP200-204ENST00000480615 SLC12A5Q9H2X9 1139 aa18.76■□□□□ 0.59
SNRNP200-204ENST00000480615 CDCA8Q53HL2 280 aa18.75■□□□□ 0.59
SNRNP200-204ENST00000480615 PXDNQ92626 1479 aa18.75■□□□□ 0.59
SNRNP200-204ENST00000480615 PLEKHG3A1L390 1219 aa18.74■□□□□ 0.59
SNRNP200-204ENST00000480615 PLEKHG5O94827 1062 aa18.74■□□□□ 0.59
SNRNP200-204ENST00000480615 PAK3O75914 559 aaPredicted RBP18.74■□□□□ 0.59
SNRNP200-204ENST00000480615 LMOD2Q6P5Q4 547 aa18.74■□□□□ 0.59
SNRNP200-204ENST00000480615 SOS2Q07890 1332 aaPredicted RBP18.72■□□□□ 0.59
SNRNP200-204ENST00000480615 POLR3AO14802 1390 aaPredicted RBP18.72■□□□□ 0.59
SNRNP200-204ENST00000480615 MYOM1P52179 1685 aa18.72■□□□□ 0.59
SNRNP200-204ENST00000480615 AKAP12Q02952 1782 aa18.71■□□□□ 0.59
SNRNP200-204ENST00000480615 PUS7Q96PZ0 661 aaKnown RBP18.71■□□□□ 0.58
SNRNP200-204ENST00000480615 KIF7Q2M1P5 1343 aa18.7■□□□□ 0.58
SNRNP200-204ENST00000480615 LRRC59Q96AG4 307 aaKnown RBP18.7■□□□□ 0.58
SNRNP200-204ENST00000480615 TRPM3Q9HCF6 1732 aaPredicted RBP18.69■□□□□ 0.58
SNRNP200-204ENST00000480615 KTN1Q86UP2 1357 aaKnown RBP18.69■□□□□ 0.58
SNRNP200-204ENST00000480615 CD163L1Q9NR16 1453 aa18.69■□□□□ 0.58
SNRNP200-204ENST00000480615 HDGFL2Q7Z4V5 671 aaPredicted RBP18.68■□□□□ 0.58
SNRNP200-204ENST00000480615 A0A1W2PP64 1363 aa18.68■□□□□ 0.58
SNRNP200-204ENST00000480615 TERF2IPQ9NYB0 399 aa18.67■□□□□ 0.58
SNRNP200-204ENST00000480615 USP6P35125 1406 aa18.67■□□□□ 0.58
SNRNP200-204ENST00000480615 NUTM2GQ5VZR2 741 aa18.67■□□□□ 0.58
SNRNP200-204ENST00000480615 MON2Q7Z3U7 1717 aa18.66■□□□□ 0.58
SNRNP200-204ENST00000480615 NINLQ9Y2I6 1382 aa18.66■□□□□ 0.58
SNRNP200-204ENST00000480615 CPSF1Q10570 1443 aaKnown RBP18.66■□□□□ 0.58
SNRNP200-204ENST00000480615 TNS3Q68CZ2 1445 aa18.66■□□□□ 0.58
SNRNP200-204ENST00000480615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms