RNA–Protein interactions for RNA: ENST00000480432.5

RFC2-207, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-207ENST00000480432 SPATA31E1Q6ZUB1 1445 aa28.68■■■□□ 2.18
RFC2-207ENST00000480432 ORAI2Q96SN7 254 aa28.67■■■□□ 2.18
RFC2-207ENST00000480432 COL22A1Q8NFW1 1626 aaPredicted RBP28.66■■■□□ 2.18
RFC2-207ENST00000480432 CDC42BPGQ6DT37 1551 aa28.64■■■□□ 2.18
RFC2-207ENST00000480432 ADAMTS2O95450 1211 aa28.62■■■□□ 2.17
RFC2-207ENST00000480432 NGLY1Q96IV0 654 aa28.62■■■□□ 2.17
RFC2-207ENST00000480432 ANKRD30BQ9BXX2 1392 aa28.62■■■□□ 2.17
RFC2-207ENST00000480432 RGL3Q3MIN7 710 aa28.6■■■□□ 2.17
RFC2-207ENST00000480432 IFT172Q9UG01 1749 aa28.57■■■□□ 2.16
RFC2-207ENST00000480432 PXDNQ92626 1479 aa28.55■■■□□ 2.16
RFC2-207ENST00000480432 TECPR2O15040 1411 aa28.55■■■□□ 2.16
RFC2-207ENST00000480432 FNBP4Q8N3X1 1017 aaPredicted RBP28.55■■■□□ 2.16
RFC2-207ENST00000480432 MYOM2P54296 1465 aa28.54■■■□□ 2.16
RFC2-207ENST00000480432 USP21Q9UK80 565 aa28.54■■■□□ 2.16
RFC2-207ENST00000480432 MARF1Q9Y4F3 1742 aaKnown RBP28.54■■■□□ 2.16
RFC2-207ENST00000480432 NPHP3Q7Z494 1330 aa28.53■■■□□ 2.16
RFC2-207ENST00000480432 KNDC1Q76NI1 1749 aa28.52■■■□□ 2.16
RFC2-207ENST00000480432 ADGRF5Q8IZF2 1346 aa28.52■■■□□ 2.16
RFC2-207ENST00000480432 TRPC5Q9UL62 973 aaPredicted RBP28.52■■■□□ 2.16
RFC2-207ENST00000480432 ATRNO75882 1429 aa28.51■■■□□ 2.15
RFC2-207ENST00000480432 ESCO1Q5FWF5 840 aa28.5■■■□□ 2.15
RFC2-207ENST00000480432 LRPPRCP42704 1394 aaKnown RBP28.5■■■□□ 2.15
RFC2-207ENST00000480432 ATAD2Q6PL18 1390 aa28.49■■■□□ 2.15
RFC2-207ENST00000480432 ABCC11Q96J66 1382 aa28.47■■■□□ 2.15
RFC2-207ENST00000480432 FMN2Q9NZ56 1722 aa28.46■■■□□ 2.15
RFC2-207ENST00000480432 PIK3C2GO75747 1445 aa28.45■■■□□ 2.15
RFC2-207ENST00000480432 BCL9LQ86UU0 1499 aa28.45■■■□□ 2.14
RFC2-207ENST00000480432 FOXO3O43524 673 aa28.44■■■□□ 2.14
RFC2-207ENST00000480432 WAPLQ7Z5K2 1190 aa28.43■■■□□ 2.14
RFC2-207ENST00000480432 KIF1AQ12756 1690 aa28.42■■■□□ 2.14
RFC2-207ENST00000480432 TRIM26Q12899 539 aaPredicted RBP28.42■■■□□ 2.14
RFC2-207ENST00000480432 STK26Q9P289 416 aa28.42■■■□□ 2.14
RFC2-207ENST00000480432 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.41■■■□□ 2.14
RFC2-207ENST00000480432 PLEKHH1Q9ULM0 1364 aa28.41■■■□□ 2.14
RFC2-207ENST00000480432 NRXN1Q9ULB1 1477 aa28.4■■■□□ 2.14
RFC2-207ENST00000480432 XPCQ01831 940 aaPredicted RBP28.4■■■□□ 2.14
RFC2-207ENST00000480432 STAC3Q96MF2 364 aa28.4■■■□□ 2.14
RFC2-207ENST00000480432 YTHDC2Q9H6S0 1430 aaKnown RBP28.38■■■□□ 2.13
RFC2-207ENST00000480432 TMEM132EQ6IEE7 984 aa28.38■■■□□ 2.13
RFC2-207ENST00000480432 C14orf93Q9H972 538 aaKnown RBP28.38■■■□□ 2.13
RFC2-207ENST00000480432 NUTM2FA1L443 756 aa28.36■■■□□ 2.13
RFC2-207ENST00000480432 SIRT1Q96EB6 747 aa28.34■■■□□ 2.13
RFC2-207ENST00000480432 SPATA31A3Q5VYP0 1347 aa28.34■■■□□ 2.13
RFC2-207ENST00000480432 SLIT2O94813 1529 aa28.33■■■□□ 2.13
RFC2-207ENST00000480432 RGPD8O14715 1765 aaPredicted RBP28.32■■■□□ 2.12
RFC2-207ENST00000480432 GJD4Q96KN9 370 aaPredicted RBP28.32■■■□□ 2.12
RFC2-207ENST00000480432 USP32Q8NFA0 1604 aa28.32■■■□□ 2.12
RFC2-207ENST00000480432 DCAF11Q8TEB1 546 aa28.31■■■□□ 2.12
RFC2-207ENST00000480432 DHX57Q6P158 1386 aaKnown RBP28.3■■■□□ 2.12
RFC2-207ENST00000480432 GLI3P10071 1580 aa28.29■■■□□ 2.12
RFC2-207ENST00000480432 CFAP70Q5T0N1 1121 aa28.29■■■□□ 2.12
RFC2-207ENST00000480432 CCDC125Q86Z20 511 aa28.29■■■□□ 2.12
RFC2-207ENST00000480432 UNC5CLQ8IV45 518 aa28.27■■■□□ 2.12
RFC2-207ENST00000480432 KDM2AQ9Y2K7 1162 aa28.27■■■□□ 2.12
RFC2-207ENST00000480432 RALGAPBQ86X10 1494 aa28.27■■■□□ 2.12
RFC2-207ENST00000480432 KRT28Q7Z3Y7 464 aa28.26■■■□□ 2.11
RFC2-207ENST00000480432 EP400Q96L91 3159 aa28.25■■■□□ 2.11
RFC2-207ENST00000480432 TNS3Q68CZ2 1445 aa28.25■■■□□ 2.11
RFC2-207ENST00000480432 ABCA3Q99758 1704 aa28.23■■■□□ 2.11
RFC2-207ENST00000480432 PHF8Q9UPP1 1060 aa28.23■■■□□ 2.11
RFC2-207ENST00000480432 NWD2Q9ULI1 1742 aa28.22■■■□□ 2.11
RFC2-207ENST00000480432 BRWD3Q6RI45 1802 aa28.21■■■□□ 2.11
RFC2-207ENST00000480432 ZRANB1Q9UGI0 708 aa28.21■■■□□ 2.11
RFC2-207ENST00000480432 PLCH1Q4KWH8 1693 aa28.21■■■□□ 2.11
RFC2-207ENST00000480432 DLC1Q96QB1 1528 aa28.21■■■□□ 2.11
RFC2-207ENST00000480432 PSME1Q06323 249 aa28.2■■■□□ 2.1
RFC2-207ENST00000480432 SBNO1A3KN83 1393 aa28.2■■■□□ 2.1
RFC2-207ENST00000480432 ADGRB2O60241 1585 aa28.19■■■□□ 2.1
RFC2-207ENST00000480432 BLMP54132 1417 aaPredicted RBP28.17■■■□□ 2.1
RFC2-207ENST00000480432 ANKARQ7Z5J8 1434 aa28.17■■■□□ 2.1
RFC2-207ENST00000480432 PRAM1Q96QH2 718 aa28.16■■■□□ 2.1
RFC2-207ENST00000480432 ARHGEF10O15013 1369 aa28.15■■■□□ 2.1
RFC2-207ENST00000480432 ADGRB1O14514 1584 aa28.15■■■□□ 2.1
RFC2-207ENST00000480432 VPS72Q15906 364 aa28.14■■■□□ 2.1
RFC2-207ENST00000480432 CABLES1Q8TDN4 633 aa28.14■■■□□ 2.1
RFC2-207ENST00000480432 SIN3AQ96ST3 1273 aa28.14■■■□□ 2.1
RFC2-207ENST00000480432 HAP1P54257 671 aaPredicted RBP28.13■■■□□ 2.09
RFC2-207ENST00000480432 TRPM3Q9HCF6 1732 aaPredicted RBP28.12■■■□□ 2.09
RFC2-207ENST00000480432 SAFB2Q14151 953 aaKnown RBP eCLIP28.11■■■□□ 2.09
RFC2-207ENST00000480432 SRCAPQ6ZRS2 3230 aa28.11■■■□□ 2.09
RFC2-207ENST00000480432 ONECUT3O60422 494 aaPredicted RBP28.1■■■□□ 2.09
RFC2-207ENST00000480432 SEPT12Q8IYM1 358 aa28.09■■■□□ 2.09
RFC2-207ENST00000480432 L3MBTL2Q969R5 705 aa28.09■■■□□ 2.09
RFC2-207ENST00000480432 POGKQ9P215 609 aa28.09■■■□□ 2.09
RFC2-207ENST00000480432 ALS2Q96Q42 1657 aa28.08■■■□□ 2.09
RFC2-207ENST00000480432 NRAPQ86VF7 1730 aa28.08■■■□□ 2.09
RFC2-207ENST00000480432 NEUROD1Q13562 356 aa28.06■■■□□ 2.08
RFC2-207ENST00000480432 LMOD2Q6P5Q4 547 aa28.06■■■□□ 2.08
RFC2-207ENST00000480432 PMFBP1Q8TBY8 1022 aa28.05■■■□□ 2.08
RFC2-207ENST00000480432 TRAK1Q9UPV9 953 aa28.05■■■□□ 2.08
RFC2-207ENST00000480432 TULP4Q9NRJ4 1543 aa28.03■■■□□ 2.08
RFC2-207ENST00000480432 EIF3AQ14152 1382 aaKnown RBP28.03■■■□□ 2.08
RFC2-207ENST00000480432 FAM83GA6ND36 823 aa28.03■■■□□ 2.08
RFC2-207ENST00000480432 KIAA1210Q9ULL0 1709 aa28.02■■■□□ 2.08
RFC2-207ENST00000480432 PLEKHG5O94827 1062 aa28.02■■■□□ 2.08
RFC2-207ENST00000480432 COL14A1Q05707 1796 aaKnown RBP28.01■■■□□ 2.08
RFC2-207ENST00000480432 CRYBG1Q9Y4K1 1723 aa28.01■■■□□ 2.07
RFC2-207ENST00000480432 CCDC9Q9Y3X0 531 aaKnown RBP28.01■■■□□ 2.07
RFC2-207ENST00000480432 KRT27Q7Z3Y8 459 aa28■■■□□ 2.07
RFC2-207ENST00000480432 DEFB132Q7Z7B7 95 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms