RNA–Protein interactions for RNA: ENST00000480112.5

CDK5RAP2-212, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,826 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-212ENST00000480112 FOXD4L3Q6VB84 417 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP2-212ENST00000480112 CIZ1Q9ULV3 898 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP2-212ENST00000480112 CT47B1P0C2W7 299 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP2-212ENST00000480112 ERICH2A1L162 156 aa15.43■□□□□ 0.06
CDK5RAP2-212ENST00000480112 NOL10Q9BSC4 688 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP2-212ENST00000480112 PDIA4P13667 645 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP2-212ENST00000480112 PIP4K2AP48426 406 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP2-212ENST00000480112 RRP9O43818 475 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP2-212ENST00000480112 G3V3G9 751 aa15.41■□□□□ 0.06
CDK5RAP2-212ENST00000480112 DCAF8Q5TAQ9 597 aa15.41■□□□□ 0.06
CDK5RAP2-212ENST00000480112 CCDC191Q8NCU4 936 aa15.41■□□□□ 0.06
CDK5RAP2-212ENST00000480112 VPS53Q5VIR6 699 aa15.41■□□□□ 0.06
CDK5RAP2-212ENST00000480112 CNTROBQ8N137 903 aa15.41■□□□□ 0.06
CDK5RAP2-212ENST00000480112 SMG6Q86US8 1419 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP2-212ENST00000480112 ELL2O00472 640 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP2-212ENST00000480112 TAF3Q5VWG9 929 aa15.41■□□□□ 0.06
CDK5RAP2-212ENST00000480112 SMARCE1Q969G3 411 aa15.4■□□□□ 0.06
CDK5RAP2-212ENST00000480112 BRMS1Q9HCU9 246 aa15.4■□□□□ 0.06
CDK5RAP2-212ENST00000480112 RDXP35241 583 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP2-212ENST00000480112 LEKR1Q6ZMV7 388 aa15.4■□□□□ 0.06
CDK5RAP2-212ENST00000480112 LNPKQ9C0E8 428 aa15.4■□□□□ 0.06
CDK5RAP2-212ENST00000480112 FYCO1Q9BQS8 1478 aa15.4■□□□□ 0.06
CDK5RAP2-212ENST00000480112 XBP1P17861 261 aa15.39■□□□□ 0.05
CDK5RAP2-212ENST00000480112 TTC5Q8N0Z6 440 aa15.39■□□□□ 0.05
CDK5RAP2-212ENST00000480112 AEBP1Q8IUX7 1158 aa15.39■□□□□ 0.05
CDK5RAP2-212ENST00000480112 ZNF396Q96N95 335 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP2-212ENST00000480112 GNAI3P08754 354 aa15.38■□□□□ 0.05
CDK5RAP2-212ENST00000480112 TRIM5Q9C035 493 aa15.38■□□□□ 0.05
CDK5RAP2-212ENST00000480112 NFXL1Q6ZNB6 911 aa15.38■□□□□ 0.05
CDK5RAP2-212ENST00000480112 FKBP5Q13451 457 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP2-212ENST00000480112 BACH2Q9BYV9 841 aa15.37■□□□□ 0.05
CDK5RAP2-212ENST00000480112 PKNOX2Q96KN3 472 aa15.37■□□□□ 0.05
CDK5RAP2-212ENST00000480112 PRM3Q9NNZ6 103 aa15.37■□□□□ 0.05
CDK5RAP2-212ENST00000480112 LRRC9Q6ZRR7 1453 aa15.37■□□□□ 0.05
CDK5RAP2-212ENST00000480112 KINO60870 393 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP2-212ENST00000480112 FILIP1LQ4L180 1135 aa15.37■□□□□ 0.05
CDK5RAP2-212ENST00000480112 RALYLQ86SE5 291 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP2-212ENST00000480112 PDCL2Q8N4E4 241 aa15.37■□□□□ 0.05
CDK5RAP2-212ENST00000480112 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.37■□□□□ 0.05
CDK5RAP2-212ENST00000480112 GTF2E1P29083 439 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP2-212ENST00000480112 PDE4CQ08493 712 aa15.37■□□□□ 0.05
CDK5RAP2-212ENST00000480112 NCBP3Q53F19 620 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP2-212ENST00000480112 TXLNBQ8N3L3 684 aa15.37■□□□□ 0.05
CDK5RAP2-212ENST00000480112 H0YHG0 523 aa15.36■□□□□ 0.05
CDK5RAP2-212ENST00000480112 SMARCA4P51532 1647 aa15.36■□□□□ 0.05
CDK5RAP2-212ENST00000480112 SDF4Q9BRK5 362 aa15.36■□□□□ 0.05
CDK5RAP2-212ENST00000480112 CCDC192P0DO97 292 aa15.35■□□□□ 0.05
CDK5RAP2-212ENST00000480112 CAGE1Q8TC20 777 aa15.35■□□□□ 0.05
CDK5RAP2-212ENST00000480112 GRPEL1Q9HAV7 217 aa15.35■□□□□ 0.05
CDK5RAP2-212ENST00000480112 RRBP1Q9P2E9 1410 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP2-212ENST00000480112 KIF21BO75037 1637 aa15.35■□□□□ 0.05
CDK5RAP2-212ENST00000480112 DHX16O60231 1041 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP2-212ENST00000480112 LTV1Q96GA3 475 aaPredicted RBP15.35■□□□□ 0.05
CDK5RAP2-212ENST00000480112 WDR33Q9C0J8 1336 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP2-212ENST00000480112 ANKRD1Q15327 319 aa15.34■□□□□ 0.05
CDK5RAP2-212ENST00000480112 ERC1Q8IUD2 1116 aa15.34■□□□□ 0.05
CDK5RAP2-212ENST00000480112 PANK1Q8TE04 598 aa15.34■□□□□ 0.05
CDK5RAP2-212ENST00000480112 DACH1Q9UI36 760 aa15.34■□□□□ 0.05
CDK5RAP2-212ENST00000480112 TCEAL9Q9UHQ7 104 aa15.34■□□□□ 0.05
CDK5RAP2-212ENST00000480112 PDZRN3Q9UPQ7 1066 aa15.34■□□□□ 0.05
CDK5RAP2-212ENST00000480112 APPP05067 770 aa15.33■□□□□ 0.05
CDK5RAP2-212ENST00000480112 UBTFL1P0CB47 393 aaPredicted RBP15.33■□□□□ 0.05
CDK5RAP2-212ENST00000480112 ERLIN1O75477 346 aa15.33■□□□□ 0.04
CDK5RAP2-212ENST00000480112 PATL2C9JE40 543 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP2-212ENST00000480112 EIF3JO75822 258 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP2-212ENST00000480112 TSPYL4Q9UJ04 414 aa15.33■□□□□ 0.04
CDK5RAP2-212ENST00000480112 K7ELQ4 463 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP2-212ENST00000480112 NAP1L1P55209 391 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP2-212ENST00000480112 JMYQ8N9B5 988 aa15.33■□□□□ 0.04
CDK5RAP2-212ENST00000480112 USP8P40818 1118 aa15.32■□□□□ 0.04
CDK5RAP2-212ENST00000480112 JPH4Q96JJ6 628 aa15.32■□□□□ 0.04
CDK5RAP2-212ENST00000480112 CASKIN1Q8WXD9 1431 aa15.32■□□□□ 0.04
CDK5RAP2-212ENST00000480112 BRPF3Q9ULD4 1205 aa15.32■□□□□ 0.04
CDK5RAP2-212ENST00000480112 CBFA2T2O43439 604 aa15.32■□□□□ 0.04
CDK5RAP2-212ENST00000480112 PRPF40AO75400 957 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP2-212ENST00000480112 CCDC112Q8NEF3 446 aa15.32■□□□□ 0.04
CDK5RAP2-212ENST00000480112 ATAD2BQ9ULI0 1458 aa15.31■□□□□ 0.04
CDK5RAP2-212ENST00000480112 PDILTQ8N807 584 aa15.31■□□□□ 0.04
CDK5RAP2-212ENST00000480112 ERICH3Q5RHP9 1530 aa15.31■□□□□ 0.04
CDK5RAP2-212ENST00000480112 HFM1A2PYH4 1435 aa15.3■□□□□ 0.04
CDK5RAP2-212ENST00000480112 EIF2S2P20042 333 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP2-212ENST00000480112 RNF214Q8ND24 703 aa15.3■□□□□ 0.04
CDK5RAP2-212ENST00000480112 SMC2O95347 1197 aa15.3■□□□□ 0.04
CDK5RAP2-212ENST00000480112 CLASRPQ8N2M8 674 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP2-212ENST00000480112 KIF2AO00139 706 aaPredicted RBP15.3■□□□□ 0.04
CDK5RAP2-212ENST00000480112 SART3Q15020 963 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP2-212ENST00000480112 WDR63Q8IWG1 891 aa15.29■□□□□ 0.04
CDK5RAP2-212ENST00000480112 TRIM34Q9BYJ4 488 aa15.29■□□□□ 0.04
CDK5RAP2-212ENST00000480112 LUC7LQ9NQ29 371 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP2-212ENST00000480112 CCDC30Q5VVM6 783 aa15.29■□□□□ 0.04
CDK5RAP2-212ENST00000480112 ANKRD50Q9ULJ7 1429 aa15.29■□□□□ 0.04
CDK5RAP2-212ENST00000480112 NEK4P51957 841 aa15.28■□□□□ 0.04
CDK5RAP2-212ENST00000480112 ADAMTS8Q9UP79 889 aa15.28■□□□□ 0.04
CDK5RAP2-212ENST00000480112 RUSC2Q8N2Y8 1516 aa15.28■□□□□ 0.04
CDK5RAP2-212ENST00000480112 OFD1O75665 1012 aa15.28■□□□□ 0.04
CDK5RAP2-212ENST00000480112 ERLIN2O94905 339 aa15.28■□□□□ 0.04
CDK5RAP2-212ENST00000480112 SRCIN1Q9C0H9 1055 aa15.28■□□□□ 0.04
CDK5RAP2-212ENST00000480112 TSPYL1Q9H0U9 437 aa15.28■□□□□ 0.04
CDK5RAP2-212ENST00000480112 MAGEC2Q9UBF1 373 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP2-212ENST00000480112 PTPRGP23470 1445 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms