RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 CYP4X1Q8N118 509 aa9.62□□□□□ -0.87
CMSS1-204ENST00000479555 GRIPAP1Q4V328 841 aa9.61□□□□□ -0.87
CMSS1-204ENST00000479555 SYMPKQ92797 1274 aaKnown RBP9.6□□□□□ -0.87
CMSS1-204ENST00000479555 ZBTB24O43167 697 aaPredicted RBP9.59□□□□□ -0.87
CMSS1-204ENST00000479555 TRIM32Q13049 653 aa9.59□□□□□ -0.87
CMSS1-204ENST00000479555 Q3C1V9 767 aa9.59□□□□□ -0.87
CMSS1-204ENST00000479555 LMOD2Q6P5Q4 547 aa9.59□□□□□ -0.87
CMSS1-204ENST00000479555 USB1Q9BQ65 265 aaKnown RBP9.59□□□□□ -0.87
CMSS1-204ENST00000479555 HOXA2O43364 376 aa9.58□□□□□ -0.88
CMSS1-204ENST00000479555 MMP16P51512 607 aa9.58□□□□□ -0.88
CMSS1-204ENST00000479555 CCDC24Q8N4L8 307 aa9.58□□□□□ -0.88
CMSS1-204ENST00000479555 MINK1Q8N4C8 1332 aaPredicted RBP9.57□□□□□ -0.88
CMSS1-204ENST00000479555 TTC24A2A3L6 582 aaPredicted RBP9.57□□□□□ -0.88
CMSS1-204ENST00000479555 DXOO77932 396 aaKnown RBP9.57□□□□□ -0.88
CMSS1-204ENST00000479555 VSIG10Q8N0Z9 540 aa9.57□□□□□ -0.88
CMSS1-204ENST00000479555 REPIN1Q9BWE0 567 aaKnown RBP9.57□□□□□ -0.88
CMSS1-204ENST00000479555 TULP1O00294 542 aaPredicted RBP9.56□□□□□ -0.88
CMSS1-204ENST00000479555 GMPR2Q9P2T1 348 aaKnown RBP9.56□□□□□ -0.88
CMSS1-204ENST00000479555 J3QL48 77 aa9.55□□□□□ -0.88
CMSS1-204ENST00000479555 AVPP01185 164 aa9.55□□□□□ -0.88
CMSS1-204ENST00000479555 MRGPRX2Q96LB1 330 aa9.55□□□□□ -0.88
CMSS1-204ENST00000479555 FAM217BQ9NTX9 383 aaPredicted RBP9.55□□□□□ -0.88
CMSS1-204ENST00000479555 AXIN1O15169 862 aa9.54□□□□□ -0.88
CMSS1-204ENST00000479555 SMPD1P17405 629 aa9.54□□□□□ -0.88
CMSS1-204ENST00000479555 CRIPAKQ8N1N5 446 aa9.54□□□□□ -0.88
CMSS1-204ENST00000479555 GPCPD1Q9NPB8 672 aa9.54□□□□□ -0.88
CMSS1-204ENST00000479555 WNT7AO00755 349 aa9.53□□□□□ -0.88
CMSS1-204ENST00000479555 SKOR1P84550 965 aa9.53□□□□□ -0.88
CMSS1-204ENST00000479555 USP46P62068 366 aa9.52□□□□□ -0.89
CMSS1-204ENST00000479555 CLCN1P35523 988 aa9.51□□□□□ -0.89
CMSS1-204ENST00000479555 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.51□□□□□ -0.89
CMSS1-204ENST00000479555 SNIP1Q8TAD8 396 aaKnown RBP9.5□□□□□ -0.89
CMSS1-204ENST00000479555 PCDHGC3Q9UN70 934 aa9.5□□□□□ -0.89
CMSS1-204ENST00000479555 C11orf95C9JLR9 678 aaPredicted RBP9.49□□□□□ -0.89
CMSS1-204ENST00000479555 JUNDP17535 347 aa9.49□□□□□ -0.89
CMSS1-204ENST00000479555 PTCRAQ6ISU1 281 aaPredicted RBP9.49□□□□□ -0.89
CMSS1-204ENST00000479555 KRI1Q8N9T8 703 aaKnown RBP9.49□□□□□ -0.89
CMSS1-204ENST00000479555 RC3H1Q5TC82 1133 aaKnown RBP9.48□□□□□ -0.89
CMSS1-204ENST00000479555 NUTM1Q86Y26 1132 aa9.48□□□□□ -0.89
CMSS1-204ENST00000479555 HPS1Q92902 700 aa9.48□□□□□ -0.89
CMSS1-204ENST00000479555 SMCPP49901 116 aaPredicted RBP9.47□□□□□ -0.89
CMSS1-204ENST00000479555 CTC1Q2NKJ3 1217 aa9.47□□□□□ -0.89
CMSS1-204ENST00000479555 LCE2AQ5TA79 106 aaPredicted RBP9.47□□□□□ -0.89
CMSS1-204ENST00000479555 FDX1P10109 184 aa9.46□□□□□ -0.9
CMSS1-204ENST00000479555 NDUFV2P19404 249 aa9.46□□□□□ -0.9
CMSS1-204ENST00000479555 TREML4Q6UXN2 200 aa9.46□□□□□ -0.9
CMSS1-204ENST00000479555 C6orf229H3BNL8 230 aa9.45□□□□□ -0.9
CMSS1-204ENST00000479555 SNRPBP14678 240 aaKnown RBP9.45□□□□□ -0.9
CMSS1-204ENST00000479555 ATP13A2Q9NQ11 1180 aa9.45□□□□□ -0.9
CMSS1-204ENST00000479555 SSTR3P32745 418 aaPredicted RBP9.44□□□□□ -0.9
CMSS1-204ENST00000479555 RETREG3Q86VR2 466 aa9.44□□□□□ -0.9
CMSS1-204ENST00000479555 SPIRE2Q8WWL2 714 aa9.44□□□□□ -0.9
CMSS1-204ENST00000479555 NUDT12Q9BQG2 462 aa9.44□□□□□ -0.9
CMSS1-204ENST00000479555 ALDH1A1P00352 501 aa9.43□□□□□ -0.9
CMSS1-204ENST00000479555 TTLL12Q14166 644 aaPredicted RBP9.43□□□□□ -0.9
CMSS1-204ENST00000479555 MOXD2PA6NHM9 499 aa9.42□□□□□ -0.9
CMSS1-204ENST00000479555 WNT7BP56706 349 aa9.41□□□□□ -0.9
CMSS1-204ENST00000479555 LINC01559Q495D7 138 aa9.4□□□□□ -0.9
CMSS1-204ENST00000479555 LCE2CQ5TA81 110 aa9.4□□□□□ -0.9
CMSS1-204ENST00000479555 GIGYF2Q6Y7W6 1299 aaKnown RBP9.4□□□□□ -0.9
CMSS1-204ENST00000479555 BARGINQ6ZT62 677 aa9.4□□□□□ -0.9
CMSS1-204ENST00000479555 WFS1O76024 890 aa9.39□□□□□ -0.91
CMSS1-204ENST00000479555 MS4A1P11836 297 aa9.39□□□□□ -0.91
CMSS1-204ENST00000479555 ZC3H15Q8WU90 426 aaKnown RBP9.39□□□□□ -0.91
CMSS1-204ENST00000479555 ZMYND10O75800 440 aa9.38□□□□□ -0.91
CMSS1-204ENST00000479555 SH3BP2P78314 561 aa9.38□□□□□ -0.91
CMSS1-204ENST00000479555 NFX1Q12986 1120 aaKnown RBP9.38□□□□□ -0.91
CMSS1-204ENST00000479555 EHBP1Q8NDI1 1231 aa9.38□□□□□ -0.91
CMSS1-204ENST00000479555 SIAH2O43255 324 aa9.37□□□□□ -0.91
CMSS1-204ENST00000479555 CCNYL3P0C7X3 344 aa9.37□□□□□ -0.91
CMSS1-204ENST00000479555 BMP1P13497 986 aa9.37□□□□□ -0.91
CMSS1-204ENST00000479555 PRR7Q8TB68 274 aa9.37□□□□□ -0.91
CMSS1-204ENST00000479555 TRIM47Q96LD4 638 aa9.36□□□□□ -0.91
CMSS1-204ENST00000479555 BEGAINQ9BUH8 593 aa9.36□□□□□ -0.91
CMSS1-204ENST00000479555 AMHR2Q16671 573 aa9.35□□□□□ -0.91
CMSS1-204ENST00000479555 UNC93B1Q9H1C4 597 aa9.35□□□□□ -0.91
CMSS1-204ENST00000479555 TLL2Q9Y6L7 1015 aa9.35□□□□□ -0.91
CMSS1-204ENST00000479555 BAP1Q92560 729 aa9.34□□□□□ -0.91
CMSS1-204ENST00000479555 PTPRNQ16849 979 aa9.33□□□□□ -0.92
CMSS1-204ENST00000479555 PARP9Q8IXQ6 854 aa9.33□□□□□ -0.92
CMSS1-204ENST00000479555 TBC1D2Q9BYX2 928 aa9.33□□□□□ -0.92
CMSS1-204ENST00000479555 PCDHB15Q9Y5E8 787 aa9.33□□□□□ -0.92
CMSS1-204ENST00000479555 MTMR2Q13614 643 aa9.32□□□□□ -0.92
CMSS1-204ENST00000479555 TRIM46Q7Z4K8 759 aa9.32□□□□□ -0.92
CMSS1-204ENST00000479555 EVA1BQ9NVM1 165 aa9.32□□□□□ -0.92
CMSS1-204ENST00000479555 WASF2Q9Y6W5 498 aa9.32□□□□□ -0.92
CMSS1-204ENST00000479555 SENP2Q9HC62 589 aa9.31□□□□□ -0.92
CMSS1-204ENST00000479555 CFAP99D6REC4 459 aa9.3□□□□□ -0.92
CMSS1-204ENST00000479555 KCNH2Q12809 1159 aa9.3□□□□□ -0.92
CMSS1-204ENST00000479555 TERTO14746 1132 aaKnown RBP9.29□□□□□ -0.92
CMSS1-204ENST00000479555 TRIM66O15016 1216 aa9.29□□□□□ -0.92
CMSS1-204ENST00000479555 CAPN5O15484 640 aaPredicted RBP9.29□□□□□ -0.92
CMSS1-204ENST00000479555 CSPP1Q1MSJ5 1256 aa9.29□□□□□ -0.92
CMSS1-204ENST00000479555 RSBN1LQ6PCB5 846 aaPredicted RBP9.29□□□□□ -0.92
CMSS1-204ENST00000479555 ZNF511Q8NB15 262 aa9.29□□□□□ -0.92
CMSS1-204ENST00000479555 CABLES1Q8TDN4 633 aa9.29□□□□□ -0.92
CMSS1-204ENST00000479555 MAP10Q9P2G4 905 aa9.28□□□□□ -0.92
CMSS1-204ENST00000479555 CTHP32929 405 aa9.27□□□□□ -0.93
CMSS1-204ENST00000479555 VEGFBP49765 207 aa9.26□□□□□ -0.93
CMSS1-204ENST00000479555 KIFC2Q96AC6 838 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms