RNA–Protein interactions for RNA: ENST00000479460.5

TRIM59-205, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-205ENST00000479460 MARF1Q9Y4F3 1742 aaKnown RBP29.4■■■□□ 2.3
TRIM59-205ENST00000479460 RPGRIP1LQ68CZ1 1315 aa29.39■■■□□ 2.3
TRIM59-205ENST00000479460 CDC42BPGQ6DT37 1551 aa29.39■■■□□ 2.29
TRIM59-205ENST00000479460 NAIPQ13075 1403 aa29.37■■■□□ 2.29
TRIM59-205ENST00000479460 EP400Q96L91 3159 aa29.37■■■□□ 2.29
TRIM59-205ENST00000479460 FOXD1Q16676 465 aa29.37■■■□□ 2.29
TRIM59-205ENST00000479460 NPHP3Q7Z494 1330 aa29.36■■■□□ 2.29
TRIM59-205ENST00000479460 PXDNQ92626 1479 aa29.35■■■□□ 2.29
TRIM59-205ENST00000479460 PPARGC1BQ86YN6 1023 aaKnown RBP29.33■■■□□ 2.29
TRIM59-205ENST00000479460 BCL9LQ86UU0 1499 aa29.33■■■□□ 2.29
TRIM59-205ENST00000479460 ZRANB1Q9UGI0 708 aa29.32■■■□□ 2.28
TRIM59-205ENST00000479460 ESCO1Q5FWF5 840 aa29.31■■■□□ 2.28
TRIM59-205ENST00000479460 CCDC125Q86Z20 511 aa29.3■■■□□ 2.28
TRIM59-205ENST00000479460 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.29■■■□□ 2.28
TRIM59-205ENST00000479460 RRBP1Q9P2E9 1410 aaKnown RBP29.28■■■□□ 2.28
TRIM59-205ENST00000479460 LRPPRCP42704 1394 aaKnown RBP29.26■■■□□ 2.27
TRIM59-205ENST00000479460 FOXO3O43524 673 aa29.24■■■□□ 2.27
TRIM59-205ENST00000479460 GJD4Q96KN9 370 aaPredicted RBP29.24■■■□□ 2.27
TRIM59-205ENST00000479460 TECPR2O15040 1411 aa29.23■■■□□ 2.27
TRIM59-205ENST00000479460 XPCQ01831 940 aaPredicted RBP29.22■■■□□ 2.27
TRIM59-205ENST00000479460 SLC4A1APQ9BWU0 796 aaKnown RBP29.22■■■□□ 2.27
TRIM59-205ENST00000479460 KNDC1Q76NI1 1749 aa29.2■■■□□ 2.26
TRIM59-205ENST00000479460 GLI3P10071 1580 aa29.18■■■□□ 2.26
TRIM59-205ENST00000479460 SLIT2O94813 1529 aa29.18■■■□□ 2.26
TRIM59-205ENST00000479460 KIF1AQ12756 1690 aa29.18■■■□□ 2.26
TRIM59-205ENST00000479460 FMN2Q9NZ56 1722 aa29.17■■■□□ 2.26
TRIM59-205ENST00000479460 ADGRF5Q8IZF2 1346 aa29.17■■■□□ 2.26
TRIM59-205ENST00000479460 RALGAPBQ86X10 1494 aa29.17■■■□□ 2.26
TRIM59-205ENST00000479460 UNC5CLQ8IV45 518 aa29.16■■■□□ 2.26
TRIM59-205ENST00000479460 IFT172Q9UG01 1749 aa29.16■■■□□ 2.26
TRIM59-205ENST00000479460 WAPLQ7Z5K2 1190 aa29.15■■■□□ 2.26
TRIM59-205ENST00000479460 BLMP54132 1417 aaPredicted RBP29.14■■■□□ 2.26
TRIM59-205ENST00000479460 USP32Q8NFA0 1604 aa29.14■■■□□ 2.26
TRIM59-205ENST00000479460 NUTM2FA1L443 756 aa29.14■■■□□ 2.26
TRIM59-205ENST00000479460 STK26Q9P289 416 aa29.14■■■□□ 2.26
TRIM59-205ENST00000479460 BRWD3Q6RI45 1802 aa29.14■■■□□ 2.26
TRIM59-205ENST00000479460 SPATA31A3Q5VYP0 1347 aa29.14■■■□□ 2.25
TRIM59-205ENST00000479460 ABCC11Q96J66 1382 aa29.13■■■□□ 2.25
TRIM59-205ENST00000479460 CCDC144AA2RUR9 1427 aa29.12■■■□□ 2.25
TRIM59-205ENST00000479460 ANKRD30BQ9BXX2 1392 aa29.11■■■□□ 2.25
TRIM59-205ENST00000479460 PLEKHH1Q9ULM0 1364 aa29.1■■■□□ 2.25
TRIM59-205ENST00000479460 SPATA31E1Q6ZUB1 1445 aa29.1■■■□□ 2.25
TRIM59-205ENST00000479460 PIK3C2GO75747 1445 aa29.06■■■□□ 2.24
TRIM59-205ENST00000479460 NWD2Q9ULI1 1742 aa29.06■■■□□ 2.24
TRIM59-205ENST00000479460 RGL3Q3MIN7 710 aa29.05■■■□□ 2.24
TRIM59-205ENST00000479460 TMEM132EQ6IEE7 984 aa29.05■■■□□ 2.24
TRIM59-205ENST00000479460 KRT28Q7Z3Y7 464 aa29.05■■■□□ 2.24
TRIM59-205ENST00000479460 RGPD8O14715 1765 aaPredicted RBP29.05■■■□□ 2.24
TRIM59-205ENST00000479460 YTHDC2Q9H6S0 1430 aaKnown RBP29.04■■■□□ 2.24
TRIM59-205ENST00000479460 PLCH1Q4KWH8 1693 aa29.04■■■□□ 2.24
TRIM59-205ENST00000479460 TNS3Q68CZ2 1445 aa29.03■■■□□ 2.24
TRIM59-205ENST00000479460 ABCA3Q99758 1704 aa29.01■■■□□ 2.23
TRIM59-205ENST00000479460 VPS72Q15906 364 aa29.01■■■□□ 2.23
TRIM59-205ENST00000479460 SEPT12Q8IYM1 358 aa29.01■■■□□ 2.23
TRIM59-205ENST00000479460 DEFB132Q7Z7B7 95 aa29■■■□□ 2.23
TRIM59-205ENST00000479460 SIRT1Q96EB6 747 aa29■■■□□ 2.23
TRIM59-205ENST00000479460 HAP1P54257 671 aaPredicted RBP28.99■■■□□ 2.23
TRIM59-205ENST00000479460 SF3B2Q13435 895 aaKnown RBP28.99■■■□□ 2.23
TRIM59-205ENST00000479460 PSME1Q06323 249 aa28.98■■■□□ 2.23
TRIM59-205ENST00000479460 PHF8Q9UPP1 1060 aa28.98■■■□□ 2.23
TRIM59-205ENST00000479460 ONECUT3O60422 494 aaPredicted RBP28.97■■■□□ 2.23
TRIM59-205ENST00000479460 LRP5O75197 1615 aa28.97■■■□□ 2.23
TRIM59-205ENST00000479460 SBNO1A3KN83 1393 aa28.96■■■□□ 2.23
TRIM59-205ENST00000479460 NRXN1Q9ULB1 1477 aa28.96■■■□□ 2.23
TRIM59-205ENST00000479460 CABLES1Q8TDN4 633 aa28.95■■■□□ 2.22
TRIM59-205ENST00000479460 ARHGEF10O15013 1369 aa28.93■■■□□ 2.22
TRIM59-205ENST00000479460 KRT27Q7Z3Y8 459 aa28.92■■■□□ 2.22
TRIM59-205ENST00000479460 MPHOSPH9Q99550 1183 aa28.91■■■□□ 2.22
TRIM59-205ENST00000479460 C14orf93Q9H972 538 aaKnown RBP28.91■■■□□ 2.22
TRIM59-205ENST00000479460 CCDC9Q9Y3X0 531 aaKnown RBP28.91■■■□□ 2.22
TRIM59-205ENST00000479460 NRAPQ86VF7 1730 aa28.89■■■□□ 2.21
TRIM59-205ENST00000479460 DHX57Q6P158 1386 aaKnown RBP28.88■■■□□ 2.21
TRIM59-205ENST00000479460 PLEKHG5O94827 1062 aa28.87■■■□□ 2.21
TRIM59-205ENST00000479460 LMOD2Q6P5Q4 547 aa28.87■■■□□ 2.21
TRIM59-205ENST00000479460 ANKARQ7Z5J8 1434 aa28.86■■■□□ 2.21
TRIM59-205ENST00000479460 FAM83GA6ND36 823 aa28.85■■■□□ 2.21
TRIM59-205ENST00000479460 TRPM3Q9HCF6 1732 aaPredicted RBP28.84■■■□□ 2.21
TRIM59-205ENST00000479460 DLC1Q96QB1 1528 aa28.84■■■□□ 2.21
TRIM59-205ENST00000479460 BAG6P46379 1132 aa28.83■■■□□ 2.21
TRIM59-205ENST00000479460 CFAP70Q5T0N1 1121 aa28.83■■■□□ 2.21
TRIM59-205ENST00000479460 PRAM1Q96QH2 718 aa28.83■■■□□ 2.21
TRIM59-205ENST00000479460 ADGRB2O60241 1585 aa28.83■■■□□ 2.21
TRIM59-205ENST00000479460 COL14A1Q05707 1796 aaKnown RBP28.81■■■□□ 2.2
TRIM59-205ENST00000479460 RGPD1P0DJD0 1748 aa28.8■■■□□ 2.2
TRIM59-205ENST00000479460 ALS2Q96Q42 1657 aa28.8■■■□□ 2.2
TRIM59-205ENST00000479460 A0A0G2JS52 829 aa28.8■■■□□ 2.2
TRIM59-205ENST00000479460 MYT1Q01538 1121 aa28.8■■■□□ 2.2
TRIM59-205ENST00000479460 SAFB2Q14151 953 aaKnown RBP eCLIP28.8■■■□□ 2.2
TRIM59-205ENST00000479460 PMFBP1Q8TBY8 1022 aa28.79■■■□□ 2.2
TRIM59-205ENST00000479460 FAM98CQ17RN3 349 aaKnown RBP28.78■■■□□ 2.2
TRIM59-205ENST00000479460 BTG4Q9NY30 223 aa28.77■■■□□ 2.2
TRIM59-205ENST00000479460 PSDA5PKW4 1024 aaPredicted RBP28.76■■■□□ 2.19
TRIM59-205ENST00000479460 HRCP23327 699 aa28.76■■■□□ 2.19
TRIM59-205ENST00000479460 POGKQ9P215 609 aa28.76■■■□□ 2.19
TRIM59-205ENST00000479460 CRYBG1Q9Y4K1 1723 aa28.74■■■□□ 2.19
TRIM59-205ENST00000479460 GPRASP1Q5JY77 1395 aa28.73■■■□□ 2.19
TRIM59-205ENST00000479460 ADGRB1O14514 1584 aa28.72■■■□□ 2.19
TRIM59-205ENST00000479460 THSD7AQ9UPZ6 1657 aa28.72■■■□□ 2.19
TRIM59-205ENST00000479460 ACIN1Q9UKV3 1341 aaKnown RBP28.71■■■□□ 2.19
TRIM59-205ENST00000479460 EIF3AQ14152 1382 aaKnown RBP28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms