RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 FMN2Q9NZ56 1722 aa18.09■□□□□ 0.49
GCA-208ENST00000479199 RBM6P78332 1123 aaKnown RBP18.08■□□□□ 0.48
GCA-208ENST00000479199 QTRT2Q9H974 415 aaKnown RBP18.08■□□□□ 0.48
GCA-208ENST00000479199 PXDNQ92626 1479 aa18.07■□□□□ 0.48
GCA-208ENST00000479199 MYOM2P54296 1465 aa18.07■□□□□ 0.48
GCA-208ENST00000479199 RGPD8O14715 1765 aaPredicted RBP18.07■□□□□ 0.48
GCA-208ENST00000479199 CCDC144AA2RUR9 1427 aa18.06■□□□□ 0.48
GCA-208ENST00000479199 SPATA31E1Q6ZUB1 1445 aa18.06■□□□□ 0.48
GCA-208ENST00000479199 ADGRF5Q8IZF2 1346 aa18.06■□□□□ 0.48
GCA-208ENST00000479199 NGLY1Q96IV0 654 aa18.06■□□□□ 0.48
GCA-208ENST00000479199 TECPR2O15040 1411 aa18.05■□□□□ 0.48
GCA-208ENST00000479199 KIF1AQ12756 1690 aa18.04■□□□□ 0.48
GCA-208ENST00000479199 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.03■□□□□ 0.48
GCA-208ENST00000479199 PIK3C2GO75747 1445 aa18.02■□□□□ 0.48
GCA-208ENST00000479199 ATRNO75882 1429 aa18.02■□□□□ 0.48
GCA-208ENST00000479199 USP21Q9UK80 565 aa18.02■□□□□ 0.48
GCA-208ENST00000479199 NPHP3Q7Z494 1330 aa18.01■□□□□ 0.47
GCA-208ENST00000479199 XPCQ01831 940 aaPredicted RBP18.01■□□□□ 0.47
GCA-208ENST00000479199 ESCO1Q5FWF5 840 aa18.01■□□□□ 0.47
GCA-208ENST00000479199 STK26Q9P289 416 aa18.01■□□□□ 0.47
GCA-208ENST00000479199 LRPPRCP42704 1394 aaKnown RBP18.01■□□□□ 0.47
GCA-208ENST00000479199 PLEKHH1Q9ULM0 1364 aa18.01■□□□□ 0.47
GCA-208ENST00000479199 RGL3Q3MIN7 710 aa18■□□□□ 0.47
GCA-208ENST00000479199 ANKRD30BQ9BXX2 1392 aa18■□□□□ 0.47
GCA-208ENST00000479199 ABCA3Q99758 1704 aa17.99■□□□□ 0.47
GCA-208ENST00000479199 WAPLQ7Z5K2 1190 aa17.99■□□□□ 0.47
GCA-208ENST00000479199 NUTM2FA1L443 756 aa17.98■□□□□ 0.47
GCA-208ENST00000479199 TRPC5Q9UL62 973 aaPredicted RBP17.98■□□□□ 0.47
GCA-208ENST00000479199 ATAD2Q6PL18 1390 aa17.98■□□□□ 0.47
GCA-208ENST00000479199 USP32Q8NFA0 1604 aa17.98■□□□□ 0.47
GCA-208ENST00000479199 BCL9LQ86UU0 1499 aa17.97■□□□□ 0.47
GCA-208ENST00000479199 FOXO3O43524 673 aa17.97■□□□□ 0.47
GCA-208ENST00000479199 FNBP4Q8N3X1 1017 aaPredicted RBP17.97■□□□□ 0.47
GCA-208ENST00000479199 YTHDC2Q9H6S0 1430 aaKnown RBP17.97■□□□□ 0.47
GCA-208ENST00000479199 BRWD3Q6RI45 1802 aa17.96■□□□□ 0.47
GCA-208ENST00000479199 ABCC11Q96J66 1382 aa17.96■□□□□ 0.47
GCA-208ENST00000479199 TMEM132EQ6IEE7 984 aa17.96■□□□□ 0.47
GCA-208ENST00000479199 MPHOSPH9Q99550 1183 aa17.96■□□□□ 0.47
GCA-208ENST00000479199 PLCH1Q4KWH8 1693 aa17.96■□□□□ 0.47
GCA-208ENST00000479199 EP400Q96L91 3159 aa17.95■□□□□ 0.46
GCA-208ENST00000479199 GLI3P10071 1580 aa17.94■□□□□ 0.46
GCA-208ENST00000479199 NRXN1Q9ULB1 1477 aa17.93■□□□□ 0.46
GCA-208ENST00000479199 NWD2Q9ULI1 1742 aa17.9■□□□□ 0.46
GCA-208ENST00000479199 SLIT2O94813 1529 aa17.9■□□□□ 0.46
GCA-208ENST00000479199 SPATA31A3Q5VYP0 1347 aa17.89■□□□□ 0.45
GCA-208ENST00000479199 TNS3Q68CZ2 1445 aa17.89■□□□□ 0.45
GCA-208ENST00000479199 RALGAPBQ86X10 1494 aa17.88■□□□□ 0.45
GCA-208ENST00000479199 ADGRB2O60241 1585 aa17.87■□□□□ 0.45
GCA-208ENST00000479199 TRPM3Q9HCF6 1732 aaPredicted RBP17.87■□□□□ 0.45
GCA-208ENST00000479199 GJD4Q96KN9 370 aaPredicted RBP17.86■□□□□ 0.45
GCA-208ENST00000479199 C14orf93Q9H972 538 aaKnown RBP17.86■□□□□ 0.45
GCA-208ENST00000479199 DLC1Q96QB1 1528 aa17.86■□□□□ 0.45
GCA-208ENST00000479199 ADGRB1O14514 1584 aa17.85■□□□□ 0.45
GCA-208ENST00000479199 CFAP70Q5T0N1 1121 aa17.85■□□□□ 0.45
GCA-208ENST00000479199 KRT28Q7Z3Y7 464 aa17.85■□□□□ 0.45
GCA-208ENST00000479199 NRAPQ86VF7 1730 aa17.85■□□□□ 0.45
GCA-208ENST00000479199 DHX57Q6P158 1386 aaKnown RBP17.84■□□□□ 0.45
GCA-208ENST00000479199 SAFB2Q14151 953 aaKnown RBP eCLIP17.84■□□□□ 0.45
GCA-208ENST00000479199 ALS2Q96Q42 1657 aa17.83■□□□□ 0.45
GCA-208ENST00000479199 UNC5CLQ8IV45 518 aa17.83■□□□□ 0.44
GCA-208ENST00000479199 PHF8Q9UPP1 1060 aa17.83■□□□□ 0.44
GCA-208ENST00000479199 CRYBG1Q9Y4K1 1723 aa17.82■□□□□ 0.44
GCA-208ENST00000479199 PLEKHG5O94827 1062 aa17.82■□□□□ 0.44
GCA-208ENST00000479199 SIRT1Q96EB6 747 aa17.82■□□□□ 0.44
GCA-208ENST00000479199 PRAM1Q96QH2 718 aa17.82■□□□□ 0.44
GCA-208ENST00000479199 CABLES1Q8TDN4 633 aa17.81■□□□□ 0.44
GCA-208ENST00000479199 ANKARQ7Z5J8 1434 aa17.81■□□□□ 0.44
GCA-208ENST00000479199 SBNO1A3KN83 1393 aa17.8■□□□□ 0.44
GCA-208ENST00000479199 SRCAPQ6ZRS2 3230 aa17.8■□□□□ 0.44
GCA-208ENST00000479199 ARHGEF28Q8N1W1 1705 aaKnown RBP17.8■□□□□ 0.44
GCA-208ENST00000479199 RAB3GAP2Q9H2M9 1393 aa17.79■□□□□ 0.44
GCA-208ENST00000479199 HAP1P54257 671 aaPredicted RBP17.79■□□□□ 0.44
GCA-208ENST00000479199 BLMP54132 1417 aaPredicted RBP17.78■□□□□ 0.44
GCA-208ENST00000479199 ITSN1Q15811 1721 aa17.78■□□□□ 0.44
GCA-208ENST00000479199 ARHGEF10O15013 1369 aa17.78■□□□□ 0.44
GCA-208ENST00000479199 PSME1Q06323 249 aa17.77■□□□□ 0.44
GCA-208ENST00000479199 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.44
GCA-208ENST00000479199 TULP4Q9NRJ4 1543 aa17.77■□□□□ 0.43
GCA-208ENST00000479199 COL14A1Q05707 1796 aaKnown RBP17.76■□□□□ 0.43
GCA-208ENST00000479199 LMOD2Q6P5Q4 547 aa17.76■□□□□ 0.43
GCA-208ENST00000479199 CCDC125Q86Z20 511 aa17.76■□□□□ 0.43
GCA-208ENST00000479199 PMFBP1Q8TBY8 1022 aa17.75■□□□□ 0.43
GCA-208ENST00000479199 POGKQ9P215 609 aa17.75■□□□□ 0.43
GCA-208ENST00000479199 ACIN1Q9UKV3 1341 aaKnown RBP17.74■□□□□ 0.43
GCA-208ENST00000479199 VPS72Q15906 364 aa17.74■□□□□ 0.43
GCA-208ENST00000479199 HIRIP3Q9BW71 556 aaPredicted RBP17.74■□□□□ 0.43
GCA-208ENST00000479199 SEPT12Q8IYM1 358 aa17.73■□□□□ 0.43
GCA-208ENST00000479199 CCDC9Q9Y3X0 531 aaKnown RBP17.73■□□□□ 0.43
GCA-208ENST00000479199 MINK1Q8N4C8 1332 aaPredicted RBP17.72■□□□□ 0.43
GCA-208ENST00000479199 PRR36Q9H6K5 1346 aa17.72■□□□□ 0.43
GCA-208ENST00000479199 TRAK1Q9UPV9 953 aa17.72■□□□□ 0.43
GCA-208ENST00000479199 PHRF1Q9P1Y6 1649 aaKnown RBP17.72■□□□□ 0.43
GCA-208ENST00000479199 DEFB132Q7Z7B7 95 aa17.71■□□□□ 0.43
GCA-208ENST00000479199 TOPAZ1Q8N9V7 1692 aa17.71■□□□□ 0.42
GCA-208ENST00000479199 RGPD1P0DJD0 1748 aa17.7■□□□□ 0.42
GCA-208ENST00000479199 EIF3AQ14152 1382 aaKnown RBP17.7■□□□□ 0.42
GCA-208ENST00000479199 FAM83GA6ND36 823 aa17.7■□□□□ 0.42
GCA-208ENST00000479199 THSD7AQ9UPZ6 1657 aa17.69■□□□□ 0.42
GCA-208ENST00000479199 KDM2AQ9Y2K7 1162 aa17.69■□□□□ 0.42
GCA-208ENST00000479199 TNS1Q9HBL0 1735 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms