RNA–Protein interactions for RNA: ENST00000478640.6

CCT3-212, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 583 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-212ENST00000478640 RXRBP28702 533 aa16.54■□□□□ 0.24
CCT3-212ENST00000478640 DCAF11Q8TEB1 546 aa16.54■□□□□ 0.24
CCT3-212ENST00000478640 POGKQ9P215 609 aa16.54■□□□□ 0.24
CCT3-212ENST00000478640 PLEKHG5O94827 1062 aa16.53■□□□□ 0.24
CCT3-212ENST00000478640 PTCH1Q13635 1447 aa16.53■□□□□ 0.24
CCT3-212ENST00000478640 AFF2P51816 1311 aa16.52■□□□□ 0.24
CCT3-212ENST00000478640 LRP6O75581 1613 aa16.52■□□□□ 0.23
CCT3-212ENST00000478640 COL16A1Q07092 1604 aaPredicted RBP16.52■□□□□ 0.23
CCT3-212ENST00000478640 LRPPRCP42704 1394 aaKnown RBP16.51■□□□□ 0.23
CCT3-212ENST00000478640 QTRT2Q9H974 415 aaKnown RBP16.51■□□□□ 0.23
CCT3-212ENST00000478640 DHX57Q6P158 1386 aaKnown RBP16.51■□□□□ 0.23
CCT3-212ENST00000478640 PLEKHH1Q9ULM0 1364 aa16.51■□□□□ 0.23
CCT3-212ENST00000478640 AHDC1Q5TGY3 1603 aaPredicted RBP16.5■□□□□ 0.23
CCT3-212ENST00000478640 PRAM1Q96QH2 718 aa16.5■□□□□ 0.23
CCT3-212ENST00000478640 ABCC11Q96J66 1382 aa16.5■□□□□ 0.23
CCT3-212ENST00000478640 TRAK1Q9UPV9 953 aa16.49■□□□□ 0.23
CCT3-212ENST00000478640 SOS2Q07890 1332 aaPredicted RBP16.48■□□□□ 0.23
CCT3-212ENST00000478640 PNPLA6Q8IY17 1366 aa16.48■□□□□ 0.23
CCT3-212ENST00000478640 NPHP3Q7Z494 1330 aa16.47■□□□□ 0.23
CCT3-212ENST00000478640 YTHDC2Q9H6S0 1430 aaKnown RBP16.47■□□□□ 0.23
CCT3-212ENST00000478640 HRCP23327 699 aa16.47■□□□□ 0.23
CCT3-212ENST00000478640 LMOD2Q6P5Q4 547 aa16.47■□□□□ 0.23
CCT3-212ENST00000478640 PIK3C2GO75747 1445 aa16.46■□□□□ 0.23
CCT3-212ENST00000478640 SIRT1Q96EB6 747 aa16.46■□□□□ 0.23
CCT3-212ENST00000478640 HIRIP3Q9BW71 556 aaPredicted RBP16.46■□□□□ 0.23
CCT3-212ENST00000478640 KRT28Q7Z3Y7 464 aa16.45■□□□□ 0.22
CCT3-212ENST00000478640 USP21Q9UK80 565 aa16.45■□□□□ 0.22
CCT3-212ENST00000478640 PPLO60437 1756 aa16.45■□□□□ 0.22
CCT3-212ENST00000478640 HAP1P54257 671 aaPredicted RBP16.44■□□□□ 0.22
CCT3-212ENST00000478640 PSME1Q06323 249 aa16.44■□□□□ 0.22
CCT3-212ENST00000478640 NALCNQ8IZF0 1738 aa16.44■□□□□ 0.22
CCT3-212ENST00000478640 PHF8Q9UPP1 1060 aa16.43■□□□□ 0.22
CCT3-212ENST00000478640 PMFBP1Q8TBY8 1022 aa16.42■□□□□ 0.22
CCT3-212ENST00000478640 MINK1Q8N4C8 1332 aaPredicted RBP16.42■□□□□ 0.22
CCT3-212ENST00000478640 RBM6P78332 1123 aaKnown RBP16.41■□□□□ 0.22
CCT3-212ENST00000478640 TECPR2O15040 1411 aa16.4■□□□□ 0.22
CCT3-212ENST00000478640 PRAG1Q86YV5 1406 aa16.39■□□□□ 0.21
CCT3-212ENST00000478640 SETD1AO15047 1707 aaKnown RBP16.39■□□□□ 0.21
CCT3-212ENST00000478640 SHPRHQ149N8 1683 aa16.38■□□□□ 0.21
CCT3-212ENST00000478640 CABLES1Q8TDN4 633 aa16.38■□□□□ 0.21
CCT3-212ENST00000478640 STAC3Q96MF2 364 aa16.38■□□□□ 0.21
CCT3-212ENST00000478640 UPF1Q92900 1129 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCT3-212ENST00000478640 TRPC5Q9UL62 973 aaPredicted RBP16.37■□□□□ 0.21
CCT3-212ENST00000478640 MYOM2P54296 1465 aa16.35■□□□□ 0.21
CCT3-212ENST00000478640 NHSL1Q5SYE7 1610 aa16.35■□□□□ 0.21
CCT3-212ENST00000478640 NEUROD1Q13562 356 aa16.35■□□□□ 0.21
CCT3-212ENST00000478640 FNBP4Q8N3X1 1017 aaPredicted RBP16.35■□□□□ 0.21
CCT3-212ENST00000478640 SPATA31A3Q5VYP0 1347 aa16.35■□□□□ 0.21
CCT3-212ENST00000478640 NRXN1Q9ULB1 1477 aa16.35■□□□□ 0.21
CCT3-212ENST00000478640 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
CCT3-212ENST00000478640 NGDNQ8NEJ9 315 aaKnown RBP16.34■□□□□ 0.21
CCT3-212ENST00000478640 CDC42BPGQ6DT37 1551 aa16.34■□□□□ 0.21
CCT3-212ENST00000478640 WASLO00401 505 aaPredicted RBP16.33■□□□□ 0.2
CCT3-212ENST00000478640 PPP4R3CPQ6ZMV5 832 aa16.33■□□□□ 0.2
CCT3-212ENST00000478640 CCDC9Q9Y3X0 531 aaKnown RBP16.33■□□□□ 0.2
CCT3-212ENST00000478640 PXDNQ92626 1479 aa16.31■□□□□ 0.2
CCT3-212ENST00000478640 NBPF1Q3BBV0 1214 aa16.3■□□□□ 0.2
CCT3-212ENST00000478640 SIN3AQ96ST3 1273 aa16.3■□□□□ 0.2
CCT3-212ENST00000478640 GPRASP1Q5JY77 1395 aa16.29■□□□□ 0.2
CCT3-212ENST00000478640 IFT172Q9UG01 1749 aa16.29■□□□□ 0.2
CCT3-212ENST00000478640 GJD4Q96KN9 370 aaPredicted RBP16.29■□□□□ 0.2
CCT3-212ENST00000478640 CDK19Q9BWU1 502 aa16.29■□□□□ 0.2
CCT3-212ENST00000478640 UNC5CLQ8IV45 518 aa16.28■□□□□ 0.2
CCT3-212ENST00000478640 NUDT16Q96DE0 195 aaKnown RBP16.28■□□□□ 0.2
CCT3-212ENST00000478640 PRR36Q9H6K5 1346 aa16.27■□□□□ 0.2
CCT3-212ENST00000478640 L3MBTL2Q969R5 705 aa16.26■□□□□ 0.19
CCT3-212ENST00000478640 A0A0G2JS52 829 aa16.25■□□□□ 0.19
CCT3-212ENST00000478640 FAM83GA6ND36 823 aa16.25■□□□□ 0.19
CCT3-212ENST00000478640 SRPK2P78362 688 aaKnown RBP16.25■□□□□ 0.19
CCT3-212ENST00000478640 MYT1Q01538 1121 aa16.25■□□□□ 0.19
CCT3-212ENST00000478640 NUTM2GQ5VZR2 741 aa16.25■□□□□ 0.19
CCT3-212ENST00000478640 RGS12O14924 1447 aa16.25■□□□□ 0.19
CCT3-212ENST00000478640 ADGRB1O14514 1584 aa16.24■□□□□ 0.19
CCT3-212ENST00000478640 SBNO1A3KN83 1393 aa16.24■□□□□ 0.19
CCT3-212ENST00000478640 EIF3AQ14152 1382 aaKnown RBP16.24■□□□□ 0.19
CCT3-212ENST00000478640 BCL9LQ86UU0 1499 aa16.23■□□□□ 0.19
CCT3-212ENST00000478640 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
CCT3-212ENST00000478640 TNS3Q68CZ2 1445 aa16.23■□□□□ 0.19
CCT3-212ENST00000478640 DLC1Q96QB1 1528 aa16.23■□□□□ 0.19
CCT3-212ENST00000478640 ARHGEF10O15013 1369 aa16.23■□□□□ 0.19
CCT3-212ENST00000478640 LAMC1P11047 1609 aa16.23■□□□□ 0.19
CCT3-212ENST00000478640 ANKARQ7Z5J8 1434 aa16.22■□□□□ 0.19
CCT3-212ENST00000478640 KNDC1Q76NI1 1749 aa16.22■□□□□ 0.19
CCT3-212ENST00000478640 FMN2Q9NZ56 1722 aa16.22■□□□□ 0.19
CCT3-212ENST00000478640 ATRNO75882 1429 aa16.21■□□□□ 0.19
CCT3-212ENST00000478640 CABP2Q9NPB3 220 aa16.21■□□□□ 0.19
CCT3-212ENST00000478640 BTG4Q9NY30 223 aa16.21■□□□□ 0.19
CCT3-212ENST00000478640 CCDC61Q9Y6R9 512 aa16.21■□□□□ 0.19
CCT3-212ENST00000478640 ATAD2Q6PL18 1390 aa16.21■□□□□ 0.19
CCT3-212ENST00000478640 NBPF8Q3BBV2 869 aa16.19■□□□□ 0.18
CCT3-212ENST00000478640 SEPT12Q8IYM1 358 aa16.19■□□□□ 0.18
CCT3-212ENST00000478640 ACEP12821 1306 aa16.19■□□□□ 0.18
CCT3-212ENST00000478640 VPS72Q15906 364 aa16.18■□□□□ 0.18
CCT3-212ENST00000478640 PRDM11Q9NQV5 511 aa16.18■□□□□ 0.18
CCT3-212ENST00000478640 CENPJQ9HC77 1338 aaPredicted RBP16.18■□□□□ 0.18
CCT3-212ENST00000478640 COL22A1Q8NFW1 1626 aaPredicted RBP16.17■□□□□ 0.18
CCT3-212ENST00000478640 ZC3H6P61129 1189 aaKnown RBP16.17■□□□□ 0.18
CCT3-212ENST00000478640 ABTB2Q8N961 1025 aa16.17■□□□□ 0.18
CCT3-212ENST00000478640 KIF1AQ12756 1690 aa16.17■□□□□ 0.18
CCT3-212ENST00000478640 ZBTB7CA1YPR0 619 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms