RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 CFAP70Q5T0N1 1121 aa16.46■□□□□ 0.23
CBWD3-206ENST00000478048 NBPF8Q3BBV2 869 aa16.45■□□□□ 0.22
CBWD3-206ENST00000478048 SETD1AO15047 1707 aaKnown RBP16.45■□□□□ 0.22
CBWD3-206ENST00000478048 TIMELESSQ9UNS1 1208 aa16.45■□□□□ 0.22
CBWD3-206ENST00000478048 TBX22Q9Y458 520 aa16.45■□□□□ 0.22
CBWD3-206ENST00000478048 METP08581 1390 aa16.44■□□□□ 0.22
CBWD3-206ENST00000478048 C14orf93Q9H972 538 aaKnown RBP16.43■□□□□ 0.22
CBWD3-206ENST00000478048 DIP2AQ14689 1571 aa16.42■□□□□ 0.22
CBWD3-206ENST00000478048 ZNF579Q8NAF0 562 aaKnown RBP16.42■□□□□ 0.22
CBWD3-206ENST00000478048 ZRANB1Q9UGI0 708 aa16.42■□□□□ 0.22
CBWD3-206ENST00000478048 TMEM132EQ6IEE7 984 aa16.42■□□□□ 0.22
CBWD3-206ENST00000478048 ZNF335Q9H4Z2 1342 aaPredicted RBP16.42■□□□□ 0.22
CBWD3-206ENST00000478048 ASXL1Q8IXJ9 1541 aa16.41■□□□□ 0.22
CBWD3-206ENST00000478048 PROM2Q8N271 834 aa16.41■□□□□ 0.22
CBWD3-206ENST00000478048 NBPF1Q3BBV0 1214 aa16.4■□□□□ 0.22
CBWD3-206ENST00000478048 PTPRUQ92729 1446 aa16.4■□□□□ 0.22
CBWD3-206ENST00000478048 STRCP1A6NGW2 1772 aa16.39■□□□□ 0.21
CBWD3-206ENST00000478048 LAMC1P11047 1609 aa16.39■□□□□ 0.21
CBWD3-206ENST00000478048 CHD2O14647 1828 aaKnown RBP16.38■□□□□ 0.21
CBWD3-206ENST00000478048 TRPM1Q7Z4N2 1603 aa16.38■□□□□ 0.21
CBWD3-206ENST00000478048 KIAA1210Q9ULL0 1709 aa16.38■□□□□ 0.21
CBWD3-206ENST00000478048 PAK3O75914 559 aaPredicted RBP16.37■□□□□ 0.21
CBWD3-206ENST00000478048 ADGRB1O14514 1584 aa16.37■□□□□ 0.21
CBWD3-206ENST00000478048 PIK3R4Q99570 1358 aa16.37■□□□□ 0.21
CBWD3-206ENST00000478048 KCNA6P17658 529 aa16.36■□□□□ 0.21
CBWD3-206ENST00000478048 AMOTL2Q9Y2J4 779 aa16.36■□□□□ 0.21
CBWD3-206ENST00000478048 STK26Q9P289 416 aa16.35■□□□□ 0.21
CBWD3-206ENST00000478048 YTHDC2Q9H6S0 1430 aaKnown RBP16.34■□□□□ 0.21
CBWD3-206ENST00000478048 NWD1Q149M9 1564 aa16.34■□□□□ 0.21
CBWD3-206ENST00000478048 XRN1Q8IZH2 1706 aaKnown RBP16.33■□□□□ 0.21
CBWD3-206ENST00000478048 ROCK2O75116 1388 aaKnown RBP16.33■□□□□ 0.21
CBWD3-206ENST00000478048 RALGAPBQ86X10 1494 aa16.33■□□□□ 0.2
CBWD3-206ENST00000478048 LRPPRCP42704 1394 aaKnown RBP16.33■□□□□ 0.2
CBWD3-206ENST00000478048 LTBP4Q8N2S1 1624 aa16.33■□□□□ 0.2
CBWD3-206ENST00000478048 RBM33Q96EV2 1170 aaKnown RBP16.31■□□□□ 0.2
CBWD3-206ENST00000478048 TRAK1Q9UPV9 953 aa16.31■□□□□ 0.2
CBWD3-206ENST00000478048 ABCC11Q96J66 1382 aa16.31■□□□□ 0.2
CBWD3-206ENST00000478048 GPRASP1Q5JY77 1395 aa16.3■□□□□ 0.2
CBWD3-206ENST00000478048 ROBO2Q9HCK4 1378 aa16.3■□□□□ 0.2
CBWD3-206ENST00000478048 MNX1P50219 401 aaPredicted RBP16.3■□□□□ 0.2
CBWD3-206ENST00000478048 LHX8Q68G74 356 aa16.29■□□□□ 0.2
CBWD3-206ENST00000478048 TECPR2O15040 1411 aa16.29■□□□□ 0.2
CBWD3-206ENST00000478048 NKTRP30414 1462 aaKnown RBP16.29■□□□□ 0.2
CBWD3-206ENST00000478048 KNDC1Q76NI1 1749 aa16.29■□□□□ 0.2
CBWD3-206ENST00000478048 DCBLD2Q96PD2 775 aa16.28■□□□□ 0.2
CBWD3-206ENST00000478048 CARD11Q9BXL7 1154 aa16.28■□□□□ 0.2
CBWD3-206ENST00000478048 LRRC7Q96NW7 1537 aa16.28■□□□□ 0.2
CBWD3-206ENST00000478048 POTEIP0CG38 1075 aa16.28■□□□□ 0.2
CBWD3-206ENST00000478048 WAPLQ7Z5K2 1190 aa16.28■□□□□ 0.2
CBWD3-206ENST00000478048 PROSER2Q86WR7 435 aaPredicted RBP16.28■□□□□ 0.2
CBWD3-206ENST00000478048 CPS1P31327 1500 aa16.27■□□□□ 0.2
CBWD3-206ENST00000478048 PLEKHH1Q9ULM0 1364 aa16.27■□□□□ 0.2
CBWD3-206ENST00000478048 PTCH1Q13635 1447 aa16.27■□□□□ 0.19
CBWD3-206ENST00000478048 XIRP1Q702N8 1843 aaKnown RBP16.26■□□□□ 0.19
CBWD3-206ENST00000478048 ARHGEF28Q8N1W1 1705 aaKnown RBP16.26■□□□□ 0.19
CBWD3-206ENST00000478048 TMEM94Q12767 1356 aa16.26■□□□□ 0.19
CBWD3-206ENST00000478048 DLC1Q96QB1 1528 aa16.25■□□□□ 0.19
CBWD3-206ENST00000478048 SAFB2Q14151 953 aaKnown RBP eCLIP16.25■□□□□ 0.19
CBWD3-206ENST00000478048 PRAM1Q96QH2 718 aa16.25■□□□□ 0.19
CBWD3-206ENST00000478048 SIRT1Q96EB6 747 aa16.23■□□□□ 0.19
CBWD3-206ENST00000478048 FAM135BQ49AJ0 1406 aa16.23■□□□□ 0.19
CBWD3-206ENST00000478048 POGKQ9P215 609 aa16.22■□□□□ 0.19
CBWD3-206ENST00000478048 ZEB1P37275 1124 aaPredicted RBP16.22■□□□□ 0.19
CBWD3-206ENST00000478048 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.21■□□□□ 0.19
CBWD3-206ENST00000478048 C14orf37Q86TY3 774 aa16.19■□□□□ 0.18
CBWD3-206ENST00000478048 CERKQ8TCT0 537 aa16.19■□□□□ 0.18
CBWD3-206ENST00000478048 NALCNQ8IZF0 1738 aa16.19■□□□□ 0.18
CBWD3-206ENST00000478048 USP47Q96K76 1375 aa16.19■□□□□ 0.18
CBWD3-206ENST00000478048 CENPJQ9HC77 1338 aaPredicted RBP16.19■□□□□ 0.18
CBWD3-206ENST00000478048 MINK1Q8N4C8 1332 aaPredicted RBP16.18■□□□□ 0.18
CBWD3-206ENST00000478048 HIRIP3Q9BW71 556 aaPredicted RBP16.18■□□□□ 0.18
CBWD3-206ENST00000478048 ADGRL3Q9HAR2 1447 aa16.18■□□□□ 0.18
CBWD3-206ENST00000478048 NCOA3Q9Y6Q9 1424 aa16.18■□□□□ 0.18
CBWD3-206ENST00000478048 ST20-MTHFSA0A0A6YYL1 179 aa16.17■□□□□ 0.18
CBWD3-206ENST00000478048 QRICH2Q9H0J4 1663 aa16.17■□□□□ 0.18
CBWD3-206ENST00000478048 EIF3AQ14152 1382 aaKnown RBP16.17■□□□□ 0.18
CBWD3-206ENST00000478048 GALR2O43603 387 aaPredicted RBP16.16■□□□□ 0.18
CBWD3-206ENST00000478048 C19orf44Q9H6X5 657 aa16.16■□□□□ 0.18
CBWD3-206ENST00000478048 PHF12Q96QT6 1004 aa16.15■□□□□ 0.18
CBWD3-206ENST00000478048 MSH6P52701 1360 aa16.15■□□□□ 0.18
CBWD3-206ENST00000478048 PLEKHG5O94827 1062 aa16.14■□□□□ 0.17
CBWD3-206ENST00000478048 HSPA5P11021 654 aaKnown RBP16.14■□□□□ 0.17
CBWD3-206ENST00000478048 EIF4G2P78344 907 aaKnown RBP eCLIP16.14■□□□□ 0.17
CBWD3-206ENST00000478048 TESK2Q96S53 571 aa16.13■□□□□ 0.17
CBWD3-206ENST00000478048 IQSEC2Q5JU85 1478 aa16.12■□□□□ 0.17
CBWD3-206ENST00000478048 ADGRB2O60241 1585 aa16.11■□□□□ 0.17
CBWD3-206ENST00000478048 CDC42BPGQ6DT37 1551 aa16.11■□□□□ 0.17
CBWD3-206ENST00000478048 NUTM2FA1L443 756 aa16.11■□□□□ 0.17
CBWD3-206ENST00000478048 ATF3P18847 181 aa16.11■□□□□ 0.17
CBWD3-206ENST00000478048 DCCP43146 1447 aa16.1■□□□□ 0.17
CBWD3-206ENST00000478048 SBNO2Q9Y2G9 1366 aa16.1■□□□□ 0.17
CBWD3-206ENST00000478048 WASLO00401 505 aaPredicted RBP16.1■□□□□ 0.17
CBWD3-206ENST00000478048 TULP4Q9NRJ4 1543 aa16.1■□□□□ 0.17
CBWD3-206ENST00000478048 CADPS2Q86UW7 1296 aa16.09■□□□□ 0.17
CBWD3-206ENST00000478048 CDK19Q9BWU1 502 aa16.08■□□□□ 0.17
CBWD3-206ENST00000478048 FMN2Q9NZ56 1722 aa16.08■□□□□ 0.16
CBWD3-206ENST00000478048 MST1RQ04912 1400 aa16.08■□□□□ 0.16
CBWD3-206ENST00000478048 UBAP1LF5GYI3 381 aa16.07■□□□□ 0.16
CBWD3-206ENST00000478048 CABP2Q9NPB3 220 aa16.07■□□□□ 0.16
CBWD3-206ENST00000478048 RGPD8O14715 1765 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms