RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 TXNDC2Q86VQ3 553 aa17.72■□□□□ 0.43
HDAC7-221ENST00000477203 KIF13AQ9H1H9 1805 aa17.72■□□□□ 0.43
HDAC7-221ENST00000477203 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.71■□□□□ 0.43
HDAC7-221ENST00000477203 ARHGAP31Q2M1Z3 1444 aa17.71■□□□□ 0.43
HDAC7-221ENST00000477203 PPM1GO15355 546 aaPredicted RBP17.7■□□□□ 0.42
HDAC7-221ENST00000477203 MTHFSP49914 203 aa17.7■□□□□ 0.42
HDAC7-221ENST00000477203 ZMYM3Q14202 1370 aa17.7■□□□□ 0.42
HDAC7-221ENST00000477203 NBR1Q14596 966 aa17.7■□□□□ 0.42
HDAC7-221ENST00000477203 EXOC6Q8TAG9 804 aa17.7■□□□□ 0.42
HDAC7-221ENST00000477203 NCKAP5LQ9HCH0 1330 aa17.69■□□□□ 0.42
HDAC7-221ENST00000477203 CDK19Q9BWU1 502 aa17.69■□□□□ 0.42
HDAC7-221ENST00000477203 PLEKHH1Q9ULM0 1364 aa17.69■□□□□ 0.42
HDAC7-221ENST00000477203 CABP1Q9NZU7 370 aa17.68■□□□□ 0.42
HDAC7-221ENST00000477203 SLC24A1O60721 1099 aa17.67■□□□□ 0.42
HDAC7-221ENST00000477203 ZMYM4Q5VZL5 1548 aa17.67■□□□□ 0.42
HDAC7-221ENST00000477203 RTN4Q9NQC3 1192 aaKnown RBP17.67■□□□□ 0.42
HDAC7-221ENST00000477203 TMEM131LA2VDJ0 1609 aa17.67■□□□□ 0.42
HDAC7-221ENST00000477203 RRP1P56182 461 aaKnown RBP17.66■□□□□ 0.42
HDAC7-221ENST00000477203 SPINK5Q9NQ38 1064 aaPredicted RBP17.66■□□□□ 0.42
HDAC7-221ENST00000477203 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
HDAC7-221ENST00000477203 NEURL4Q96JN8 1562 aa17.66■□□□□ 0.42
HDAC7-221ENST00000477203 CGNL1Q0VF96 1302 aa17.66■□□□□ 0.42
HDAC7-221ENST00000477203 SLC26A8Q96RN1 970 aa17.65■□□□□ 0.42
HDAC7-221ENST00000477203 YTHDC2Q9H6S0 1430 aaKnown RBP17.65■□□□□ 0.42
HDAC7-221ENST00000477203 RIMS2Q9UQ26 1411 aa17.65■□□□□ 0.42
HDAC7-221ENST00000477203 U2SURPO15042 1029 aaKnown RBP17.65■□□□□ 0.42
HDAC7-221ENST00000477203 SETBP1Q9Y6X0 1596 aa17.64■□□□□ 0.42
HDAC7-221ENST00000477203 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.64■□□□□ 0.41
HDAC7-221ENST00000477203 ZC3H13Q5T200 1668 aaKnown RBP17.64■□□□□ 0.41
HDAC7-221ENST00000477203 TULP4Q9NRJ4 1543 aa17.64■□□□□ 0.41
HDAC7-221ENST00000477203 SBNO2Q9Y2G9 1366 aa17.63■□□□□ 0.41
HDAC7-221ENST00000477203 U2AF1L5P0DN76 240 aaPredicted RBP17.63■□□□□ 0.41
HDAC7-221ENST00000477203 U2AF1Q01081 240 aaKnown RBP eCLIP17.63■□□□□ 0.41
HDAC7-221ENST00000477203 A0A1W2PP64 1363 aa17.62■□□□□ 0.41
HDAC7-221ENST00000477203 C20orf194Q5TEA3 1177 aa17.62■□□□□ 0.41
HDAC7-221ENST00000477203 ARHGEF28Q8N1W1 1705 aaKnown RBP17.62■□□□□ 0.41
HDAC7-221ENST00000477203 BLMP54132 1417 aaPredicted RBP17.61■□□□□ 0.41
HDAC7-221ENST00000477203 GOLGA2Q08379 1002 aa17.61■□□□□ 0.41
HDAC7-221ENST00000477203 SKAP1Q86WV1 359 aa17.61■□□□□ 0.41
HDAC7-221ENST00000477203 A2ML1A8K2U0 1454 aa17.61■□□□□ 0.41
HDAC7-221ENST00000477203 METP08581 1390 aa17.6■□□□□ 0.41
HDAC7-221ENST00000477203 PDE3BQ13370 1112 aa17.6■□□□□ 0.41
HDAC7-221ENST00000477203 SOX12O15370 315 aa17.59■□□□□ 0.41
HDAC7-221ENST00000477203 ALKQ9UM73 1620 aa17.59■□□□□ 0.41
HDAC7-221ENST00000477203 ZRANB1Q9UGI0 708 aa17.58■□□□□ 0.41
HDAC7-221ENST00000477203 TERF2IPQ9NYB0 399 aa17.58■□□□□ 0.4
HDAC7-221ENST00000477203 CRBNQ96SW2 442 aa17.57■□□□□ 0.4
HDAC7-221ENST00000477203 MYO3AQ8NEV4 1616 aa17.57■□□□□ 0.4
HDAC7-221ENST00000477203 TNRQ92752 1358 aa17.57■□□□□ 0.4
HDAC7-221ENST00000477203 LTKP29376 864 aa17.57■□□□□ 0.4
HDAC7-221ENST00000477203 DUSP27Q5VZP5 1158 aa17.57■□□□□ 0.4
HDAC7-221ENST00000477203 FYB1O15117 783 aa17.56■□□□□ 0.4
HDAC7-221ENST00000477203 HDGFL2Q7Z4V5 671 aaPredicted RBP17.56■□□□□ 0.4
HDAC7-221ENST00000477203 PTPRMP28827 1452 aa17.56■□□□□ 0.4
HDAC7-221ENST00000477203 ANKRD36BQ8N2N9 1353 aa17.56■□□□□ 0.4
HDAC7-221ENST00000477203 ARHGEF40Q8TER5 1519 aa17.56■□□□□ 0.4
HDAC7-221ENST00000477203 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
HDAC7-221ENST00000477203 TCP11L2Q8N4U5 519 aa17.56■□□□□ 0.4
HDAC7-221ENST00000477203 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
HDAC7-221ENST00000477203 NPC1L1Q9UHC9 1359 aa17.55■□□□□ 0.4
HDAC7-221ENST00000477203 RNF123Q5XPI4 1314 aa17.55■□□□□ 0.4
HDAC7-221ENST00000477203 AGLP35573 1532 aa17.54■□□□□ 0.4
HDAC7-221ENST00000477203 BCAR3O75815 825 aa17.54■□□□□ 0.4
HDAC7-221ENST00000477203 ERICH6BQ5W0A0 696 aa17.54■□□□□ 0.4
HDAC7-221ENST00000477203 RBM33Q96EV2 1170 aaKnown RBP17.54■□□□□ 0.4
HDAC7-221ENST00000477203 BCL2L13Q9BXK5 485 aa17.54■□□□□ 0.4
HDAC7-221ENST00000477203 ZFYVE9O95405 1425 aa17.53■□□□□ 0.4
HDAC7-221ENST00000477203 PLEKHG5O94827 1062 aa17.52■□□□□ 0.4
HDAC7-221ENST00000477203 NME9Q86XW9 330 aa17.52■□□□□ 0.4
HDAC7-221ENST00000477203 SLFN5Q08AF3 891 aa17.51■□□□□ 0.39
HDAC7-221ENST00000477203 WWC1Q8IX03 1113 aa17.5■□□□□ 0.39
HDAC7-221ENST00000477203 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.5■□□□□ 0.39
HDAC7-221ENST00000477203 FRAT1Q92837 279 aaPredicted RBP17.5■□□□□ 0.39
HDAC7-221ENST00000477203 ATAD2Q6PL18 1390 aa17.49■□□□□ 0.39
HDAC7-221ENST00000477203 SPATA31D1Q6ZQQ2 1576 aa17.49■□□□□ 0.39
HDAC7-221ENST00000477203 NUDT16Q96DE0 195 aaKnown RBP17.49■□□□□ 0.39
HDAC7-221ENST00000477203 WASLO00401 505 aaPredicted RBP17.49■□□□□ 0.39
HDAC7-221ENST00000477203 RUNDC1Q96C34 613 aa17.48■□□□□ 0.39
HDAC7-221ENST00000477203 POLR3AO14802 1390 aaPredicted RBP17.48■□□□□ 0.39
HDAC7-221ENST00000477203 HMOX1P09601 288 aa17.48■□□□□ 0.39
HDAC7-221ENST00000477203 CANXP27824 592 aaKnown RBP17.48■□□□□ 0.39
HDAC7-221ENST00000477203 ZNF521Q96K83 1311 aa17.47■□□□□ 0.39
HDAC7-221ENST00000477203 HDGFP51858 240 aaKnown RBP17.47■□□□□ 0.39
HDAC7-221ENST00000477203 RRS1Q15050 365 aaKnown RBP17.47■□□□□ 0.39
HDAC7-221ENST00000477203 IL27Q8NEV9 243 aa17.47■□□□□ 0.39
HDAC7-221ENST00000477203 PMFBP1Q8TBY8 1022 aa17.47■□□□□ 0.39
HDAC7-221ENST00000477203 EMILIN1Q9Y6C2 1016 aa17.47■□□□□ 0.39
HDAC7-221ENST00000477203 FANCIQ9NVI1 1328 aa17.46■□□□□ 0.39
HDAC7-221ENST00000477203 EID1Q9Y6B2 187 aa17.46■□□□□ 0.39
HDAC7-221ENST00000477203 TMEM2Q9UHN6 1383 aa17.46■□□□□ 0.38
HDAC7-221ENST00000477203 TSR2Q969E8 191 aaKnown RBP17.45■□□□□ 0.38
HDAC7-221ENST00000477203 REREQ9P2R6 1566 aa17.45■□□□□ 0.38
HDAC7-221ENST00000477203 ABCC11Q96J66 1382 aa17.44■□□□□ 0.38
HDAC7-221ENST00000477203 LAS1LQ9Y4W2 734 aaKnown RBP17.44■□□□□ 0.38
HDAC7-221ENST00000477203 ROBO2Q9HCK4 1378 aa17.44■□□□□ 0.38
HDAC7-221ENST00000477203 PPIP5K1Q6PFW1 1433 aa17.43■□□□□ 0.38
HDAC7-221ENST00000477203 E9PSI1 815 aa17.43■□□□□ 0.38
HDAC7-221ENST00000477203 CLUAP1Q96AJ1 413 aa17.43■□□□□ 0.38
HDAC7-221ENST00000477203 CD163L1Q9NR16 1453 aa17.43■□□□□ 0.38
HDAC7-221ENST00000477203 MAPK8IP3Q9UPT6 1336 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms