RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 DEFB132Q7Z7B7 95 aa17.27■□□□□ 0.36
LSM2-212ENST00000477182 MYOM2P54296 1465 aa17.26■□□□□ 0.35
LSM2-212ENST00000477182 ORAI2Q96SN7 254 aa17.26■□□□□ 0.35
LSM2-212ENST00000477182 SPHKAPQ2M3C7 1700 aa17.26■□□□□ 0.35
LSM2-212ENST00000477182 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.26■□□□□ 0.35
LSM2-212ENST00000477182 ROCK1Q13464 1354 aa17.23■□□□□ 0.35
LSM2-212ENST00000477182 NPHP3Q7Z494 1330 aa17.22■□□□□ 0.35
LSM2-212ENST00000477182 ZNF326Q5BKZ1 582 aaKnown RBP17.22■□□□□ 0.35
LSM2-212ENST00000477182 UNC5CLQ8IV45 518 aa17.22■□□□□ 0.35
LSM2-212ENST00000477182 BRWD3Q6RI45 1802 aa17.21■□□□□ 0.35
LSM2-212ENST00000477182 RALGAPBQ86X10 1494 aa17.21■□□□□ 0.35
LSM2-212ENST00000477182 HRCP23327 699 aa17.21■□□□□ 0.35
LSM2-212ENST00000477182 GLI3P10071 1580 aa17.2■□□□□ 0.34
LSM2-212ENST00000477182 BAG6P46379 1132 aa17.18■□□□□ 0.34
LSM2-212ENST00000477182 HFM1A2PYH4 1435 aa17.18■□□□□ 0.34
LSM2-212ENST00000477182 NAIPQ13075 1403 aa17.18■□□□□ 0.34
LSM2-212ENST00000477182 SLIT2O94813 1529 aa17.17■□□□□ 0.34
LSM2-212ENST00000477182 PSDA5PKW4 1024 aaPredicted RBP17.17■□□□□ 0.34
LSM2-212ENST00000477182 SEPT12Q8IYM1 358 aa17.17■□□□□ 0.34
LSM2-212ENST00000477182 LRPPRCP42704 1394 aaKnown RBP17.16■□□□□ 0.34
LSM2-212ENST00000477182 ESCO1Q5FWF5 840 aa17.16■□□□□ 0.34
LSM2-212ENST00000477182 PXDNQ92626 1479 aa17.16■□□□□ 0.34
LSM2-212ENST00000477182 NUP155O75694 1391 aa17.15■□□□□ 0.34
LSM2-212ENST00000477182 ROBO2Q9HCK4 1378 aa17.15■□□□□ 0.34
LSM2-212ENST00000477182 KRT27Q7Z3Y8 459 aa17.14■□□□□ 0.33
LSM2-212ENST00000477182 PRAG1Q86YV5 1406 aa17.13■□□□□ 0.33
LSM2-212ENST00000477182 NEXMIFQ5QGS0 1516 aa17.12■□□□□ 0.33
LSM2-212ENST00000477182 FOXO3O43524 673 aa17.12■□□□□ 0.33
LSM2-212ENST00000477182 ONECUT3O60422 494 aaPredicted RBP17.12■□□□□ 0.33
LSM2-212ENST00000477182 YY1P25490 414 aa17.12■□□□□ 0.33
LSM2-212ENST00000477182 VPS72Q15906 364 aa17.11■□□□□ 0.33
LSM2-212ENST00000477182 RAB3GAP2Q9H2M9 1393 aa17.11■□□□□ 0.33
LSM2-212ENST00000477182 CDC42BPGQ6DT37 1551 aa17.1■□□□□ 0.33
LSM2-212ENST00000477182 XPCQ01831 940 aaPredicted RBP17.09■□□□□ 0.33
LSM2-212ENST00000477182 USP32Q8NFA0 1604 aa17.09■□□□□ 0.33
LSM2-212ENST00000477182 VGFO15240 615 aaPredicted RBP17.08■□□□□ 0.32
LSM2-212ENST00000477182 CCDC9Q9Y3X0 531 aaKnown RBP17.08■□□□□ 0.32
LSM2-212ENST00000477182 NWD2Q9ULI1 1742 aa17.07■□□□□ 0.32
LSM2-212ENST00000477182 SPATA31A3Q5VYP0 1347 aa17.06■□□□□ 0.32
LSM2-212ENST00000477182 KIF1BO60333 1816 aa17.06■□□□□ 0.32
LSM2-212ENST00000477182 HAP1P54257 671 aaPredicted RBP17.06■□□□□ 0.32
LSM2-212ENST00000477182 R3HDM1Q15032 1099 aaKnown RBP17.06■□□□□ 0.32
LSM2-212ENST00000477182 RGPD1P0DJD0 1748 aa17.05■□□□□ 0.32
LSM2-212ENST00000477182 A0A0G2JS52 829 aa17.04■□□□□ 0.32
LSM2-212ENST00000477182 MYT1Q01538 1121 aa17.04■□□□□ 0.32
LSM2-212ENST00000477182 EN1Q05925 392 aaPredicted RBP17.04■□□□□ 0.32
LSM2-212ENST00000477182 PLCH1Q4KWH8 1693 aa17.03■□□□□ 0.32
LSM2-212ENST00000477182 CCDC144AA2RUR9 1427 aa17.03■□□□□ 0.32
LSM2-212ENST00000477182 CLTCL1P53675 1640 aa17.03■□□□□ 0.32
LSM2-212ENST00000477182 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
LSM2-212ENST00000477182 DISP2A7MBM2 1401 aa17.01■□□□□ 0.31
LSM2-212ENST00000477182 DCAF8L1A6NGE4 600 aa17■□□□□ 0.31
LSM2-212ENST00000477182 RPGRIP1LQ68CZ1 1315 aa16.99■□□□□ 0.31
LSM2-212ENST00000477182 KRT28Q7Z3Y7 464 aa16.99■□□□□ 0.31
LSM2-212ENST00000477182 NUTM2FA1L443 756 aa16.98■□□□□ 0.31
LSM2-212ENST00000477182 PSME1Q06323 249 aa16.98■□□□□ 0.31
LSM2-212ENST00000477182 TNS3Q68CZ2 1445 aa16.97■□□□□ 0.31
LSM2-212ENST00000477182 FAM98CQ17RN3 349 aaKnown RBP16.97■□□□□ 0.31
LSM2-212ENST00000477182 ACIN1Q9UKV3 1341 aaKnown RBP16.95■□□□□ 0.3
LSM2-212ENST00000477182 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
LSM2-212ENST00000477182 TNS1Q9HBL0 1735 aaKnown RBP16.94■□□□□ 0.3
LSM2-212ENST00000477182 EZH2Q15910 746 aaKnown RBP16.94■□□□□ 0.3
LSM2-212ENST00000477182 CABLES1Q8TDN4 633 aa16.94■□□□□ 0.3
LSM2-212ENST00000477182 FMN2Q9NZ56 1722 aa16.93■□□□□ 0.3
LSM2-212ENST00000477182 ARHGEF10O15013 1369 aa16.93■□□□□ 0.3
LSM2-212ENST00000477182 PARD3Q8TEW0 1356 aa16.93■□□□□ 0.3
LSM2-212ENST00000477182 FAM83GA6ND36 823 aa16.93■□□□□ 0.3
LSM2-212ENST00000477182 ABCA3Q99758 1704 aa16.93■□□□□ 0.3
LSM2-212ENST00000477182 SBNO1A3KN83 1393 aa16.92■□□□□ 0.3
LSM2-212ENST00000477182 TECPR2O15040 1411 aa16.92■□□□□ 0.3
LSM2-212ENST00000477182 NRAPQ86VF7 1730 aa16.92■□□□□ 0.3
LSM2-212ENST00000477182 PPLO60437 1756 aa16.92■□□□□ 0.3
LSM2-212ENST00000477182 WAPLQ7Z5K2 1190 aa16.91■□□□□ 0.3
LSM2-212ENST00000477182 CAMKK2Q96RR4 588 aa16.91■□□□□ 0.3
LSM2-212ENST00000477182 PPP1R1BQ9UD71 204 aaPredicted RBP16.91■□□□□ 0.3
LSM2-212ENST00000477182 LMOD2Q6P5Q4 547 aa16.9■□□□□ 0.3
LSM2-212ENST00000477182 BTG4Q9NY30 223 aa16.9■□□□□ 0.3
LSM2-212ENST00000477182 PHF8Q9UPP1 1060 aa16.9■□□□□ 0.3
LSM2-212ENST00000477182 PLEKHG5O94827 1062 aa16.89■□□□□ 0.29
LSM2-212ENST00000477182 NBPF8Q3BBV2 869 aa16.89■□□□□ 0.29
LSM2-212ENST00000477182 FAM182BQ5T319 152 aa16.89■□□□□ 0.29
LSM2-212ENST00000477182 NBPF14Q5TI25 921 aa16.89■□□□□ 0.29
LSM2-212ENST00000477182 MPHOSPH9Q99550 1183 aa16.89■□□□□ 0.29
LSM2-212ENST00000477182 SLC4A1APQ9BWU0 796 aaKnown RBP16.89■□□□□ 0.29
LSM2-212ENST00000477182 DHX57Q6P158 1386 aaKnown RBP16.89■□□□□ 0.29
LSM2-212ENST00000477182 NINLQ9Y2I6 1382 aa16.89■□□□□ 0.29
LSM2-212ENST00000477182 STK26Q9P289 416 aa16.88■□□□□ 0.29
LSM2-212ENST00000477182 ABCC11Q96J66 1382 aa16.88■□□□□ 0.29
LSM2-212ENST00000477182 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
LSM2-212ENST00000477182 FAM196AQ6ZSG2 479 aa16.87■□□□□ 0.29
LSM2-212ENST00000477182 SPON1Q9HCB6 807 aa16.87■□□□□ 0.29
LSM2-212ENST00000477182 SPATA31A5Q5VU36 1347 aa16.87■□□□□ 0.29
LSM2-212ENST00000477182 SPATA31A7Q8IWB4 1347 aa16.87■□□□□ 0.29
LSM2-212ENST00000477182 KNDC1Q76NI1 1749 aa16.87■□□□□ 0.29
LSM2-212ENST00000477182 THSD7AQ9UPZ6 1657 aa16.86■□□□□ 0.29
LSM2-212ENST00000477182 TRIM37O94972 964 aa16.86■□□□□ 0.29
LSM2-212ENST00000477182 APBA3O96018 575 aa16.86■□□□□ 0.29
LSM2-212ENST00000477182 IFFO2Q5TF58 517 aa16.86■□□□□ 0.29
LSM2-212ENST00000477182 RGPD8O14715 1765 aaPredicted RBP16.86■□□□□ 0.29
LSM2-212ENST00000477182 NRXN1Q9ULB1 1477 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms