RNA–Protein interactions for RNA: ENST00000477119.1

APTX-221, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-221ENST00000477119 PNPLA6Q8IY17 1366 aa19.76■□□□□ 0.75
APTX-221ENST00000477119 C14orf93Q9H972 538 aaKnown RBP19.76■□□□□ 0.75
APTX-221ENST00000477119 NUTM2FA1L443 756 aa19.75■□□□□ 0.75
APTX-221ENST00000477119 CFAP70Q5T0N1 1121 aa19.75■□□□□ 0.75
APTX-221ENST00000477119 SOS2Q07890 1332 aaPredicted RBP19.75■□□□□ 0.75
APTX-221ENST00000477119 TECPR2O15040 1411 aa19.74■□□□□ 0.75
APTX-221ENST00000477119 AFF2P51816 1311 aa19.74■□□□□ 0.75
APTX-221ENST00000477119 PLEKHH1Q9ULM0 1364 aa19.73■□□□□ 0.75
APTX-221ENST00000477119 C8orf37Q96NL8 207 aa19.73■□□□□ 0.75
APTX-221ENST00000477119 YTHDC2Q9H6S0 1430 aaKnown RBP19.73■□□□□ 0.75
APTX-221ENST00000477119 IFT172Q9UG01 1749 aa19.73■□□□□ 0.75
APTX-221ENST00000477119 ADAMTS2O95450 1211 aa19.72■□□□□ 0.75
APTX-221ENST00000477119 RXRBP28702 533 aa19.72■□□□□ 0.75
APTX-221ENST00000477119 FOXO3O43524 673 aa19.71■□□□□ 0.75
APTX-221ENST00000477119 SIRT1Q96EB6 747 aa19.71■□□□□ 0.75
APTX-221ENST00000477119 NGLY1Q96IV0 654 aa19.7■□□□□ 0.74
APTX-221ENST00000477119 NPHP3Q7Z494 1330 aa19.7■□□□□ 0.74
APTX-221ENST00000477119 CDC42BPGQ6DT37 1551 aa19.7■□□□□ 0.74
APTX-221ENST00000477119 DHX57Q6P158 1386 aaKnown RBP19.7■□□□□ 0.74
APTX-221ENST00000477119 HRCP23327 699 aa19.69■□□□□ 0.74
APTX-221ENST00000477119 XPCQ01831 940 aaPredicted RBP19.69■□□□□ 0.74
APTX-221ENST00000477119 MYOM2P54296 1465 aa19.68■□□□□ 0.74
APTX-221ENST00000477119 KDM2AQ9Y2K7 1162 aa19.68■□□□□ 0.74
APTX-221ENST00000477119 NRXN1Q9ULB1 1477 aa19.67■□□□□ 0.74
APTX-221ENST00000477119 LAMC1P11047 1609 aa19.67■□□□□ 0.74
APTX-221ENST00000477119 SAFB2Q14151 953 aaKnown RBP eCLIP19.66■□□□□ 0.74
APTX-221ENST00000477119 DCAF11Q8TEB1 546 aa19.66■□□□□ 0.74
APTX-221ENST00000477119 PRAM1Q96QH2 718 aa19.66■□□□□ 0.74
APTX-221ENST00000477119 QTRT2Q9H974 415 aaKnown RBP19.66■□□□□ 0.74
APTX-221ENST00000477119 POGKQ9P215 609 aa19.64■□□□□ 0.73
APTX-221ENST00000477119 KNDC1Q76NI1 1749 aa19.62■□□□□ 0.73
APTX-221ENST00000477119 PXDNQ92626 1479 aa19.61■□□□□ 0.73
APTX-221ENST00000477119 RBM6P78332 1123 aaKnown RBP19.61■□□□□ 0.73
APTX-221ENST00000477119 TRAK1Q9UPV9 953 aa19.61■□□□□ 0.73
APTX-221ENST00000477119 KRT28Q7Z3Y7 464 aa19.6■□□□□ 0.73
APTX-221ENST00000477119 USP21Q9UK80 565 aa19.6■□□□□ 0.73
APTX-221ENST00000477119 STAC3Q96MF2 364 aa19.59■□□□□ 0.73
APTX-221ENST00000477119 PHF8Q9UPP1 1060 aa19.59■□□□□ 0.73
APTX-221ENST00000477119 FNBP4Q8N3X1 1017 aaPredicted RBP19.58■□□□□ 0.72
APTX-221ENST00000477119 UPF1Q92900 1129 aaKnown RBP eCLIP19.58■□□□□ 0.72
APTX-221ENST00000477119 CDK12Q9NYV4 1490 aaPredicted RBP19.58■□□□□ 0.72
APTX-221ENST00000477119 SPATA31A3Q5VYP0 1347 aa19.57■□□□□ 0.72
APTX-221ENST00000477119 FMN2Q9NZ56 1722 aa19.56■□□□□ 0.72
APTX-221ENST00000477119 PSME1Q06323 249 aa19.55■□□□□ 0.72
APTX-221ENST00000477119 HIRIP3Q9BW71 556 aaPredicted RBP19.55■□□□□ 0.72
APTX-221ENST00000477119 TRPC5Q9UL62 973 aaPredicted RBP19.55■□□□□ 0.72
APTX-221ENST00000477119 COL22A1Q8NFW1 1626 aaPredicted RBP19.54■□□□□ 0.72
APTX-221ENST00000477119 MINK1Q8N4C8 1332 aaPredicted RBP19.54■□□□□ 0.72
APTX-221ENST00000477119 ADGRB1O14514 1584 aa19.54■□□□□ 0.72
APTX-221ENST00000477119 DLC1Q96QB1 1528 aa19.54■□□□□ 0.72
APTX-221ENST00000477119 PMFBP1Q8TBY8 1022 aa19.53■□□□□ 0.72
APTX-221ENST00000477119 RGS12O14924 1447 aa19.52■□□□□ 0.72
APTX-221ENST00000477119 PLEKHG5O94827 1062 aa19.52■□□□□ 0.72
APTX-221ENST00000477119 LMOD2Q6P5Q4 547 aa19.51■□□□□ 0.71
APTX-221ENST00000477119 KIF1AQ12756 1690 aa19.51■□□□□ 0.71
APTX-221ENST00000477119 HAP1P54257 671 aaPredicted RBP19.5■□□□□ 0.71
APTX-221ENST00000477119 CABLES1Q8TDN4 633 aa19.49■□□□□ 0.71
APTX-221ENST00000477119 ANKARQ7Z5J8 1434 aa19.49■□□□□ 0.71
APTX-221ENST00000477119 WASLO00401 505 aaPredicted RBP19.48■□□□□ 0.71
APTX-221ENST00000477119 BCL9LQ86UU0 1499 aa19.48■□□□□ 0.71
APTX-221ENST00000477119 ATRNO75882 1429 aa19.47■□□□□ 0.71
APTX-221ENST00000477119 SBNO1A3KN83 1393 aa19.46■□□□□ 0.71
APTX-221ENST00000477119 TNS3Q68CZ2 1445 aa19.46■□□□□ 0.71
APTX-221ENST00000477119 PRR36Q9H6K5 1346 aa19.46■□□□□ 0.71
APTX-221ENST00000477119 EIF3AQ14152 1382 aaKnown RBP19.45■□□□□ 0.7
APTX-221ENST00000477119 GJD4Q96KN9 370 aaPredicted RBP19.45■□□□□ 0.7
APTX-221ENST00000477119 RGPD8O14715 1765 aaPredicted RBP19.44■□□□□ 0.7
APTX-221ENST00000477119 UNC5CLQ8IV45 518 aa19.44■□□□□ 0.7
APTX-221ENST00000477119 ADGRB2O60241 1585 aa19.44■□□□□ 0.7
APTX-221ENST00000477119 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
APTX-221ENST00000477119 NGDNQ8NEJ9 315 aaKnown RBP19.43■□□□□ 0.7
APTX-221ENST00000477119 USP32Q8NFA0 1604 aa19.43■□□□□ 0.7
APTX-221ENST00000477119 GPRASP1Q5JY77 1395 aa19.43■□□□□ 0.7
APTX-221ENST00000477119 NBPF1Q3BBV0 1214 aa19.41■□□□□ 0.7
APTX-221ENST00000477119 ATAD2Q6PL18 1390 aa19.41■□□□□ 0.7
APTX-221ENST00000477119 NUDT16Q96DE0 195 aaKnown RBP19.4■□□□□ 0.7
APTX-221ENST00000477119 SLIT2O94813 1529 aa19.4■□□□□ 0.7
APTX-221ENST00000477119 TULP4Q9NRJ4 1543 aa19.4■□□□□ 0.7
APTX-221ENST00000477119 PAK3O75914 559 aaPredicted RBP19.39■□□□□ 0.69
APTX-221ENST00000477119 CDK19Q9BWU1 502 aa19.39■□□□□ 0.69
APTX-221ENST00000477119 FAM83GA6ND36 823 aa19.38■□□□□ 0.69
APTX-221ENST00000477119 MARF1Q9Y4F3 1742 aaKnown RBP19.38■□□□□ 0.69
APTX-221ENST00000477119 CCDC9Q9Y3X0 531 aaKnown RBP19.36■□□□□ 0.69
APTX-221ENST00000477119 RALGAPBQ86X10 1494 aa19.35■□□□□ 0.69
APTX-221ENST00000477119 VPS72Q15906 364 aa19.35■□□□□ 0.69
APTX-221ENST00000477119 L3MBTL2Q969R5 705 aa19.35■□□□□ 0.69
APTX-221ENST00000477119 SIN3AQ96ST3 1273 aa19.35■□□□□ 0.69
APTX-221ENST00000477119 ARHGEF28Q8N1W1 1705 aaKnown RBP19.34■□□□□ 0.69
APTX-221ENST00000477119 NEUROD1Q13562 356 aa19.33■□□□□ 0.68
APTX-221ENST00000477119 CCDC61Q9Y6R9 512 aa19.33■□□□□ 0.68
APTX-221ENST00000477119 ATP7BP35670 1465 aa19.32■□□□□ 0.68
APTX-221ENST00000477119 NBPF8Q3BBV2 869 aa19.31■□□□□ 0.68
APTX-221ENST00000477119 SEPT12Q8IYM1 358 aa19.31■□□□□ 0.68
APTX-221ENST00000477119 BTG4Q9NY30 223 aa19.31■□□□□ 0.68
APTX-221ENST00000477119 ACEP12821 1306 aa19.3■□□□□ 0.68
APTX-221ENST00000477119 SRPK2P78362 688 aaKnown RBP19.3■□□□□ 0.68
APTX-221ENST00000477119 GLI3P10071 1580 aa19.3■□□□□ 0.68
APTX-221ENST00000477119 TRPM3Q9HCF6 1732 aaPredicted RBP19.3■□□□□ 0.68
APTX-221ENST00000477119 KIAA1210Q9ULL0 1709 aa19.3■□□□□ 0.68
APTX-221ENST00000477119 CENPJQ9HC77 1338 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms