RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, human

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GMDS-204	ENST00000476972	ADGRF5	Q8IZF2	1346 aa		28.1	■■■□□ 2.09
GMDS-204	ENST00000476972	ANKRD30B	Q9BXX2	1392 aa		28.1	■■■□□ 2.09
GMDS-204	ENST00000476972	NALCN	Q8IZF0	1738 aa		28.09	■■■□□ 2.09
GMDS-204	ENST00000476972	PRAG1	Q86YV5	1406 aa		28.08	■■■□□ 2.09
GMDS-204	ENST00000476972	RBM6	P78332	1123 aa	Known RBP	28.07	■■■□□ 2.08
GMDS-204	ENST00000476972	STK26	Q9P289	416 aa		28.06	■■■□□ 2.08
GMDS-204	ENST00000476972	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.06	■■■□□ 2.08
GMDS-204	ENST00000476972	ESCO1	Q5FWF5	840 aa		28.05	■■■□□ 2.08
GMDS-204	ENST00000476972	PIK3C2G	O75747	1445 aa		28.03	■■■□□ 2.08
GMDS-204	ENST00000476972	WAPL	Q7Z5K2	1190 aa		28.03	■■■□□ 2.08
GMDS-204	ENST00000476972	MYOM2	P54296	1465 aa		28.02	■■■□□ 2.08
GMDS-204	ENST00000476972	TMEM132E	Q6IEE7	984 aa		28.01	■■■□□ 2.07
GMDS-204	ENST00000476972	NRXN1	Q9ULB1	1477 aa		27.98	■■■□□ 2.07
GMDS-204	ENST00000476972	FOXO3	O43524	673 aa		27.98	■■■□□ 2.07
GMDS-204	ENST00000476972	USP21	Q9UK80	565 aa		27.98	■■■□□ 2.07
GMDS-204	ENST00000476972	NPHP3	Q7Z494	1330 aa		27.97	■■■□□ 2.07
GMDS-204	ENST00000476972	NUTM2F	A1L443	756 aa		27.97	■■■□□ 2.07
GMDS-204	ENST00000476972	RGS12	O14924	1447 aa		27.96	■■■□□ 2.07
GMDS-204	ENST00000476972	XPC	Q01831	940 aa	Predicted RBP	27.96	■■■□□ 2.07
GMDS-204	ENST00000476972	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.96	■■■□□ 2.07
GMDS-204	ENST00000476972	LAMC1	P11047	1609 aa		27.96	■■■□□ 2.07
GMDS-204	ENST00000476972	LRPPRC	P42704	1394 aa	Known RBP	27.95	■■■□□ 2.06
GMDS-204	ENST00000476972	KNDC1	Q76NI1	1749 aa		27.95	■■■□□ 2.06
GMDS-204	ENST00000476972	ABCC11	Q96J66	1382 aa		27.94	■■■□□ 2.06
GMDS-204	ENST00000476972	TRPC5	Q9UL62	973 aa	Predicted RBP	27.93	■■■□□ 2.06
GMDS-204	ENST00000476972	PLEKHH1	Q9ULM0	1364 aa		27.92	■■■□□ 2.06
GMDS-204	ENST00000476972	TECPR2	O15040	1411 aa		27.91	■■■□□ 2.06
GMDS-204	ENST00000476972	CDC42BPG	Q6DT37	1551 aa		27.87	■■■□□ 2.05
GMDS-204	ENST00000476972	PXDN	Q92626	1479 aa		27.87	■■■□□ 2.05
GMDS-204	ENST00000476972	YTHDC2	Q9H6S0	1430 aa	Known RBP	27.86	■■■□□ 2.05
GMDS-204	ENST00000476972	SIRT1	Q96EB6	747 aa		27.86	■■■□□ 2.05
GMDS-204	ENST00000476972	C14orf93	Q9H972	538 aa	Known RBP	27.86	■■■□□ 2.05
GMDS-204	ENST00000476972	CFAP70	Q5T0N1	1121 aa		27.83	■■■□□ 2.05
GMDS-204	ENST00000476972	ATRN	O75882	1429 aa		27.82	■■■□□ 2.04
GMDS-204	ENST00000476972	DHX57	Q6P158	1386 aa	Known RBP	27.81	■■■□□ 2.04
GMDS-204	ENST00000476972	KRT28	Q7Z3Y7	464 aa		27.8	■■■□□ 2.04
GMDS-204	ENST00000476972	DCAF11	Q8TEB1	546 aa		27.8	■■■□□ 2.04
GMDS-204	ENST00000476972	BCL9L	Q86UU0	1499 aa		27.8	■■■□□ 2.04
GMDS-204	ENST00000476972	ADGRB1	O14514	1584 aa		27.79	■■■□□ 2.04
GMDS-204	ENST00000476972	ATAD2	Q6PL18	1390 aa		27.79	■■■□□ 2.04
GMDS-204	ENST00000476972	SPATA31A3	Q5VYP0	1347 aa		27.79	■■■□□ 2.04
GMDS-204	ENST00000476972	KDM2A	Q9Y2K7	1162 aa		27.79	■■■□□ 2.04
GMDS-204	ENST00000476972	COL22A1	Q8NFW1	1626 aa	Predicted RBP	27.78	■■■□□ 2.04
GMDS-204	ENST00000476972	GJD4	Q96KN9	370 aa	Predicted RBP	27.76	■■■□□ 2.03
GMDS-204	ENST00000476972	SAFB2	Q14151	953 aa	Known RBP eCLIP	27.75	■■■□□ 2.03
GMDS-204	ENST00000476972	PRAM1	Q96QH2	718 aa		27.75	■■■□□ 2.03
GMDS-204	ENST00000476972	PHF8	Q9UPP1	1060 aa		27.75	■■■□□ 2.03
GMDS-204	ENST00000476972	STAC3	Q96MF2	364 aa		27.74	■■■□□ 2.03
GMDS-204	ENST00000476972	DLC1	Q96QB1	1528 aa		27.72	■■■□□ 2.03
GMDS-204	ENST00000476972	PSME1	Q06323	249 aa		27.72	■■■□□ 2.03
GMDS-204	ENST00000476972	UNC5CL	Q8IV45	518 aa		27.72	■■■□□ 2.03
GMDS-204	ENST00000476972	FMN2	Q9NZ56	1722 aa		27.7	■■■□□ 2.03
GMDS-204	ENST00000476972	POGK	Q9P215	609 aa		27.7	■■■□□ 2.02
GMDS-204	ENST00000476972	CABLES1	Q8TDN4	633 aa		27.69	■■■□□ 2.02
GMDS-204	ENST00000476972	PLEKHG5	O94827	1062 aa		27.68	■■■□□ 2.02
GMDS-204	ENST00000476972	SRCAP	Q6ZRS2	3230 aa		27.68	■■■□□ 2.02
GMDS-204	ENST00000476972	HAP1	P54257	671 aa	Predicted RBP	27.67	■■■□□ 2.02
GMDS-204	ENST00000476972	TRIM26	Q12899	539 aa	Predicted RBP	27.66	■■■□□ 2.02
GMDS-204	ENST00000476972	LMOD2	Q6P5Q4	547 aa		27.66	■■■□□ 2.02
GMDS-204	ENST00000476972	KIAA1210	Q9ULL0	1709 aa		27.65	■■■□□ 2.02
GMDS-204	ENST00000476972	PMFBP1	Q8TBY8	1022 aa		27.65	■■■□□ 2.02
GMDS-204	ENST00000476972	SLIT2	O94813	1529 aa		27.64	■■■□□ 2.02
GMDS-204	ENST00000476972	CCDC125	Q86Z20	511 aa		27.64	■■■□□ 2.02
GMDS-204	ENST00000476972	TRAK1	Q9UPV9	953 aa		27.63	■■■□□ 2.01
GMDS-204	ENST00000476972	ARHGEF28	Q8N1W1	1705 aa	Known RBP	27.62	■■■□□ 2.01
GMDS-204	ENST00000476972	ADGRB2	O60241	1585 aa		27.62	■■■□□ 2.01
GMDS-204	ENST00000476972	TNS3	Q68CZ2	1445 aa		27.62	■■■□□ 2.01
GMDS-204	ENST00000476972	RALGAPB	Q86X10	1494 aa		27.61	■■■□□ 2.01
GMDS-204	ENST00000476972	SBNO1	A3KN83	1393 aa		27.6	■■■□□ 2.01
GMDS-204	ENST00000476972	HIRIP3	Q9BW71	556 aa	Predicted RBP	27.6	■■■□□ 2.01
GMDS-204	ENST00000476972	ZRANB1	Q9UGI0	708 aa		27.59	■■■□□ 2.01
GMDS-204	ENST00000476972	EP400	Q96L91	3159 aa		27.59	■■■□□ 2.01
GMDS-204	ENST00000476972	KIF1A	Q12756	1690 aa		27.59	■■■□□ 2.01
GMDS-204	ENST00000476972	VPS72	Q15906	364 aa		27.58	■■■□□ 2.01
GMDS-204	ENST00000476972	SIN3A	Q96ST3	1273 aa		27.58	■■■□□ 2.01
GMDS-204	ENST00000476972	RGPD8	O14715	1765 aa	Predicted RBP	27.58	■■■□□ 2
GMDS-204	ENST00000476972	FAM83G	A6ND36	823 aa		27.56	■■■□□ 2
GMDS-204	ENST00000476972	SEPT12	Q8IYM1	358 aa		27.56	■■■□□ 2
GMDS-204	ENST00000476972	MINK1	Q8N4C8	1332 aa	Predicted RBP	27.56	■■■□□ 2
GMDS-204	ENST00000476972	ARHGEF10	O15013	1369 aa		27.56	■■■□□ 2
GMDS-204	ENST00000476972	CCDC9	Q9Y3X0	531 aa	Known RBP	27.55	■■■□□ 2
GMDS-204	ENST00000476972	ANKAR	Q7Z5J8	1434 aa		27.55	■■■□□ 2
GMDS-204	ENST00000476972	USP32	Q8NFA0	1604 aa		27.53	■■■□□ 2
GMDS-204	ENST00000476972	L3MBTL2	Q969R5	705 aa		27.53	■■■□□ 2
GMDS-204	ENST00000476972	MARF1	Q9Y4F3	1742 aa	Known RBP	27.53	■■■□□ 2
GMDS-204	ENST00000476972	ONECUT3	O60422	494 aa	Predicted RBP	27.52	■■■□□ 2
GMDS-204	ENST00000476972	NEUROD1	Q13562	356 aa		27.52	■■■□□ 2
GMDS-204	ENST00000476972	GLI3	P10071	1580 aa		27.52	■■■□□ 2
GMDS-204	ENST00000476972	PRR36	Q9H6K5	1346 aa		27.51	■■□□□ 1.99
GMDS-204	ENST00000476972	WASL	O00401	505 aa	Predicted RBP	27.51	■■□□□ 1.99
GMDS-204	ENST00000476972	GPRASP1	Q5JY77	1395 aa		27.48	■■□□□ 1.99
GMDS-204	ENST00000476972	NBPF1	Q3BBV0	1214 aa		27.48	■■□□□ 1.99
GMDS-204	ENST00000476972	TRPM1	Q7Z4N2	1603 aa		27.48	■■□□□ 1.99
GMDS-204	ENST00000476972	TULP4	Q9NRJ4	1543 aa		27.46	■■□□□ 1.99
GMDS-204	ENST00000476972	NGDN	Q8NEJ9	315 aa	Known RBP	27.46	■■□□□ 1.99
GMDS-204	ENST00000476972	BTG4	Q9NY30	223 aa		27.46	■■□□□ 1.99
GMDS-204	ENST00000476972	BLM	P54132	1417 aa	Predicted RBP	27.46	■■□□□ 1.99
GMDS-204	ENST00000476972	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.46	■■□□□ 1.99
GMDS-204	ENST00000476972	KRT27	Q7Z3Y8	459 aa		27.45	■■□□□ 1.98
GMDS-204	ENST00000476972	DEFB132	Q7Z7B7	95 aa		27.45	■■□□□ 1.98

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