RNA–Protein interactions for RNA: ENST00000475960.1

RBM34-206, Transcript of RNA binding motif protein 34, human

TSL 3

Gene RBM34, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM34-206	ENST00000475960	ERBB3	P21860	1342 aa		14.04	□□□□□ -0.16
RBM34-206	ENST00000475960	FECH	P22830	423 aa		14.03	□□□□□ -0.16
RBM34-206	ENST00000475960	EMP3	P54852	163 aa		14.03	□□□□□ -0.16
RBM34-206	ENST00000475960	NCOA1	Q15788	1441 aa		14.03	□□□□□ -0.16
RBM34-206	ENST00000475960	NUP153	P49790	1475 aa	Known RBP	14.03	□□□□□ -0.16
RBM34-206	ENST00000475960	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	14.02	□□□□□ -0.16
RBM34-206	ENST00000475960	SCAPER	Q9BY12	1400 aa		14.02	□□□□□ -0.16
RBM34-206	ENST00000475960	PTPRE	P23469	700 aa		14.02	□□□□□ -0.17
RBM34-206	ENST00000475960	MARVELD3	Q96A59	401 aa		14.01	□□□□□ -0.17
RBM34-206	ENST00000475960	IRF6	O14896	467 aa		14	□□□□□ -0.17
RBM34-206	ENST00000475960	VARS2	Q5ST30	1063 aa	Known RBP	14	□□□□□ -0.17
RBM34-206	ENST00000475960	ESF1	Q9H501	851 aa	Known RBP	14	□□□□□ -0.17
RBM34-206	ENST00000475960	RBM27	Q9P2N5	1060 aa	Known RBP	13.99	□□□□□ -0.17
RBM34-206	ENST00000475960	TRAPPC8	Q9Y2L5	1435 aa		13.98	□□□□□ -0.17
RBM34-206	ENST00000475960	SAMD9	Q5K651	1589 aa		13.98	□□□□□ -0.17
RBM34-206	ENST00000475960	PPP1R3G	B7ZBB8	358 aa		13.97	□□□□□ -0.17
RBM34-206	ENST00000475960	CCDC102A	Q96A19	550 aa		13.97	□□□□□ -0.17
RBM34-206	ENST00000475960	PRX	Q9BXM0	1461 aa		13.97	□□□□□ -0.17
RBM34-206	ENST00000475960	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.96	□□□□□ -0.17
RBM34-206	ENST00000475960	COL9A1	P20849	921 aa		13.96	□□□□□ -0.17
RBM34-206	ENST00000475960	SETD1B	Q9UPS6	1966 aa	Known RBP	13.96	□□□□□ -0.18
RBM34-206	ENST00000475960	ZNF518A	Q6AHZ1	1483 aa		13.95	□□□□□ -0.18
RBM34-206	ENST00000475960	PRSS12	P56730	875 aa		13.95	□□□□□ -0.18
RBM34-206	ENST00000475960	C3	P01024	1663 aa		13.95	□□□□□ -0.18
RBM34-206	ENST00000475960	CAMSAP1	Q5T5Y3	1602 aa		13.94	□□□□□ -0.18
RBM34-206	ENST00000475960	TRIM66	O15016	1216 aa		13.94	□□□□□ -0.18
RBM34-206	ENST00000475960	PLCH2	O75038	1416 aa		13.94	□□□□□ -0.18
RBM34-206	ENST00000475960	HSPA1L	P34931	641 aa		13.94	□□□□□ -0.18
RBM34-206	ENST00000475960	PADI6	Q6TGC4	694 aa		13.94	□□□□□ -0.18
RBM34-206	ENST00000475960	KCNK17	Q96T54	332 aa		13.94	□□□□□ -0.18
RBM34-206	ENST00000475960	FAM205C	A6NFA0	338 aa		13.93	□□□□□ -0.18
RBM34-206	ENST00000475960	CDCA7L	Q96GN5	454 aa		13.93	□□□□□ -0.18
RBM34-206	ENST00000475960	CNTLN	Q9NXG0	1405 aa		13.92	□□□□□ -0.18
RBM34-206	ENST00000475960	LCE2D	Q5TA82	110 aa	Predicted RBP	13.92	□□□□□ -0.18
RBM34-206	ENST00000475960	TTC13	Q8NBP0	860 aa		13.92	□□□□□ -0.18
RBM34-206	ENST00000475960	MYT1L	Q9UL68	1186 aa		13.92	□□□□□ -0.18
RBM34-206	ENST00000475960	RERE	Q9P2R6	1566 aa		13.92	□□□□□ -0.18
RBM34-206	ENST00000475960	BRPF1	P55201	1214 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM34-206	ENST00000475960	PIP4K2B	P78356	416 aa		13.91	□□□□□ -0.18
RBM34-206	ENST00000475960	EFCAB2	Q5VUJ9	269 aa		13.9	□□□□□ -0.18
RBM34-206	ENST00000475960	AGL	P35573	1532 aa		13.9	□□□□□ -0.19
RBM34-206	ENST00000475960	NPAT	Q14207	1427 aa		13.9	□□□□□ -0.19
RBM34-206	ENST00000475960	ARHGAP33	O14559	1287 aa		13.89	□□□□□ -0.19
RBM34-206	ENST00000475960	TOM1	O60784	492 aa		13.89	□□□□□ -0.19
RBM34-206	ENST00000475960	PBX2	P40425	430 aa		13.89	□□□□□ -0.19
RBM34-206	ENST00000475960	NEUROD2	Q15784	382 aa		13.89	□□□□□ -0.19
RBM34-206	ENST00000475960	ZNF687	Q8N1G0	1237 aa		13.89	□□□□□ -0.19
RBM34-206	ENST00000475960	KDM5C	P41229	1560 aa		13.88	□□□□□ -0.19
RBM34-206	ENST00000475960	DIP2C	Q9Y2E4	1556 aa		13.88	□□□□□ -0.19
RBM34-206	ENST00000475960	PLA2R1	Q13018	1463 aa		13.88	□□□□□ -0.19
RBM34-206	ENST00000475960	HS3ST6	Q96QI5	342 aa		13.88	□□□□□ -0.19
RBM34-206	ENST00000475960	PSEN2	P49810	448 aa		13.87	□□□□□ -0.19
RBM34-206	ENST00000475960	PDE4D	Q08499	809 aa		13.87	□□□□□ -0.19
RBM34-206	ENST00000475960	OAT	P04181	439 aa		13.86	□□□□□ -0.19
RBM34-206	ENST00000475960	AMHR2	Q16671	573 aa		13.86	□□□□□ -0.19
RBM34-206	ENST00000475960	ADGRG1	Q9Y653	693 aa		13.86	□□□□□ -0.19
RBM34-206	ENST00000475960	POTEE	Q6S8J3	1075 aa		13.85	□□□□□ -0.19
RBM34-206	ENST00000475960	TSKS	Q9UJT2	592 aa		13.85	□□□□□ -0.19
RBM34-206	ENST00000475960	TRIM6-TRIM34	B2RNG4	842 aa		13.84	□□□□□ -0.19
RBM34-206	ENST00000475960	TCOF1	Q13428	1488 aa	Known RBP	13.83	□□□□□ -0.2
RBM34-206	ENST00000475960	POTEB3	A0JP26	581 aa		13.83	□□□□□ -0.2
RBM34-206	ENST00000475960	ONECUT3	O60422	494 aa	Predicted RBP	13.83	□□□□□ -0.2
RBM34-206	ENST00000475960	FAM161A	Q3B820	660 aa		13.83	□□□□□ -0.2
RBM34-206	ENST00000475960	POTEB	Q6S5H4	581 aa		13.83	□□□□□ -0.2
RBM34-206	ENST00000475960	METTL3	Q86U44	580 aa	Known RBP	13.83	□□□□□ -0.2
RBM34-206	ENST00000475960	AFAP1	Q8N556	730 aa		13.83	□□□□□ -0.2
RBM34-206	ENST00000475960	ZBED2	Q9BTP6	218 aa		13.83	□□□□□ -0.2
RBM34-206	ENST00000475960	FAM198A	Q9UFP1	575 aa		13.83	□□□□□ -0.2
RBM34-206	ENST00000475960	AXIN2	Q9Y2T1	843 aa		13.83	□□□□□ -0.2
RBM34-206	ENST00000475960	MYO5C	Q9NQX4	1742 aa		13.83	□□□□□ -0.2
RBM34-206	ENST00000475960	CPS1	P31327	1500 aa		13.83	□□□□□ -0.2
RBM34-206	ENST00000475960	ABCA6	Q8N139	1617 aa		13.82	□□□□□ -0.2
RBM34-206	ENST00000475960	MLH3	Q9UHC1	1453 aa		13.82	□□□□□ -0.2
RBM34-206	ENST00000475960	ARHGAP5	Q13017	1502 aa		13.82	□□□□□ -0.2
RBM34-206	ENST00000475960	PROX2	Q3B8N5	592 aa		13.81	□□□□□ -0.2
RBM34-206	ENST00000475960	PACS2	Q86VP3	889 aa		13.81	□□□□□ -0.2
RBM34-206	ENST00000475960	RBM46	Q8TBY0	533 aa	Known RBP	13.81	□□□□□ -0.2
RBM34-206	ENST00000475960	PXYLP1	Q8TE99	480 aa		13.81	□□□□□ -0.2
RBM34-206	ENST00000475960	SLC4A5	Q9BY07	1137 aa		13.81	□□□□□ -0.2
RBM34-206	ENST00000475960	PTPRK	Q15262	1439 aa		13.81	□□□□□ -0.2
RBM34-206	ENST00000475960	CDK13	Q14004	1512 aa	Known RBP	13.8	□□□□□ -0.2
RBM34-206	ENST00000475960	MROH2A	A6NES4	1674 aa		13.8	□□□□□ -0.2
RBM34-206	ENST00000475960	ZNF142	P52746	1687 aa	Predicted RBP	13.8	□□□□□ -0.2
RBM34-206	ENST00000475960	RANGAP1	P46060	587 aa	Predicted RBP	13.8	□□□□□ -0.2
RBM34-206	ENST00000475960	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.79	□□□□□ -0.2
RBM34-206	ENST00000475960	MYO3A	Q8NEV4	1616 aa		13.79	□□□□□ -0.2
RBM34-206	ENST00000475960	NBPF26	B4DH59	902 aa		13.79	□□□□□ -0.2
RBM34-206	ENST00000475960	DMRTA1	Q5VZB9	504 aa		13.79	□□□□□ -0.2
RBM34-206	ENST00000475960	PHOX2B	Q99453	314 aa		13.79	□□□□□ -0.2
RBM34-206	ENST00000475960	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.79	□□□□□ -0.2
RBM34-206	ENST00000475960	KIF14	Q15058	1648 aa		13.78	□□□□□ -0.2
RBM34-206	ENST00000475960	TTLL12	Q14166	644 aa	Predicted RBP	13.77	□□□□□ -0.21
RBM34-206	ENST00000475960	ZMYM3	Q14202	1370 aa		13.77	□□□□□ -0.21
RBM34-206	ENST00000475960	PARP9	Q8IXQ6	854 aa		13.77	□□□□□ -0.21
RBM34-206	ENST00000475960	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.77	□□□□□ -0.21
RBM34-206	ENST00000475960	NUDT18	Q6ZVK8	323 aa		13.76	□□□□□ -0.21
RBM34-206	ENST00000475960	KDM4C	Q9H3R0	1056 aa		13.76	□□□□□ -0.21
RBM34-206	ENST00000475960	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.76	□□□□□ -0.21
RBM34-206	ENST00000475960	TATDN2	Q93075	761 aa		13.75	□□□□□ -0.21
RBM34-206	ENST00000475960	EYA1	Q99502	592 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms