RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 NALCNQ8IZF0 1738 aa20.75■□□□□ 0.91
ABCF3-211ENST00000475728 ROBO1Q9Y6N7 1651 aa20.75■□□□□ 0.91
ABCF3-211ENST00000475728 POGKQ9P215 609 aa20.75■□□□□ 0.91
ABCF3-211ENST00000475728 MST1RQ04912 1400 aa20.75■□□□□ 0.91
ABCF3-211ENST00000475728 TONSLQ96HA7 1378 aa20.74■□□□□ 0.91
ABCF3-211ENST00000475728 KIAA1210Q9ULL0 1709 aa20.73■□□□□ 0.91
ABCF3-211ENST00000475728 PRAM1Q96QH2 718 aa20.73■□□□□ 0.91
ABCF3-211ENST00000475728 TRAK1Q9UPV9 953 aa20.73■□□□□ 0.91
ABCF3-211ENST00000475728 CLSPNQ9HAW4 1339 aa20.73■□□□□ 0.91
ABCF3-211ENST00000475728 CDC42BPGQ6DT37 1551 aa20.72■□□□□ 0.91
ABCF3-211ENST00000475728 PLEKHH1Q9ULM0 1364 aa20.72■□□□□ 0.91
ABCF3-211ENST00000475728 BRINP3Q76B58 766 aa20.71■□□□□ 0.91
ABCF3-211ENST00000475728 C1orf167Q5SNV9 1468 aa20.69■□□□□ 0.9
ABCF3-211ENST00000475728 SAFB2Q14151 953 aaKnown RBP eCLIP20.67■□□□□ 0.9
ABCF3-211ENST00000475728 NBPF1Q3BBV0 1214 aa20.66■□□□□ 0.9
ABCF3-211ENST00000475728 AHDC1Q5TGY3 1603 aaPredicted RBP20.65■□□□□ 0.9
ABCF3-211ENST00000475728 EIF3AQ14152 1382 aaKnown RBP20.64■□□□□ 0.89
ABCF3-211ENST00000475728 ROCK2O75116 1388 aaKnown RBP20.62■□□□□ 0.89
ABCF3-211ENST00000475728 PHLPP1O60346 1717 aa20.62■□□□□ 0.89
ABCF3-211ENST00000475728 ESCO1Q5FWF5 840 aa20.62■□□□□ 0.89
ABCF3-211ENST00000475728 TIMELESSQ9UNS1 1208 aa20.62■□□□□ 0.89
ABCF3-211ENST00000475728 ADGRB2O60241 1585 aa20.61■□□□□ 0.89
ABCF3-211ENST00000475728 JCADQ9P266 1359 aa20.6■□□□□ 0.89
ABCF3-211ENST00000475728 MINK1Q8N4C8 1332 aaPredicted RBP20.6■□□□□ 0.89
ABCF3-211ENST00000475728 CCER1Q8TC90 406 aaPredicted RBP20.6■□□□□ 0.89
ABCF3-211ENST00000475728 ORAI2Q96SN7 254 aa20.6■□□□□ 0.89
ABCF3-211ENST00000475728 TRPM1Q7Z4N2 1603 aa20.6■□□□□ 0.89
ABCF3-211ENST00000475728 ARHGEF28Q8N1W1 1705 aaKnown RBP20.58■□□□□ 0.89
ABCF3-211ENST00000475728 FMN2Q9NZ56 1722 aa20.58■□□□□ 0.89
ABCF3-211ENST00000475728 COL16A1Q07092 1604 aaPredicted RBP20.58■□□□□ 0.89
ABCF3-211ENST00000475728 NUTM2FA1L443 756 aa20.58■□□□□ 0.89
ABCF3-211ENST00000475728 NBPF8Q3BBV2 869 aa20.58■□□□□ 0.89
ABCF3-211ENST00000475728 ANKARQ7Z5J8 1434 aa20.58■□□□□ 0.88
ABCF3-211ENST00000475728 NPHP3Q7Z494 1330 aa20.57■□□□□ 0.88
ABCF3-211ENST00000475728 CENPJQ9HC77 1338 aaPredicted RBP20.57■□□□□ 0.88
ABCF3-211ENST00000475728 WASLO00401 505 aaPredicted RBP20.57■□□□□ 0.88
ABCF3-211ENST00000475728 LRRC59Q96AG4 307 aaKnown RBP20.57■□□□□ 0.88
ABCF3-211ENST00000475728 HIRIP3Q9BW71 556 aaPredicted RBP20.57■□□□□ 0.88
ABCF3-211ENST00000475728 GPRASP1Q5JY77 1395 aa20.57■□□□□ 0.88
ABCF3-211ENST00000475728 NHSL1Q5SYE7 1610 aa20.56■□□□□ 0.88
ABCF3-211ENST00000475728 RALGAPBQ86X10 1494 aa20.55■□□□□ 0.88
ABCF3-211ENST00000475728 CARD11Q9BXL7 1154 aa20.53■□□□□ 0.88
ABCF3-211ENST00000475728 PHF8Q9UPP1 1060 aa20.53■□□□□ 0.88
ABCF3-211ENST00000475728 SOS2Q07890 1332 aaPredicted RBP20.53■□□□□ 0.88
ABCF3-211ENST00000475728 SPATA31A6Q5VVP1 1343 aa20.53■□□□□ 0.88
ABCF3-211ENST00000475728 TULP4Q9NRJ4 1543 aa20.52■□□□□ 0.87
ABCF3-211ENST00000475728 KIF1AQ12756 1690 aa20.51■□□□□ 0.87
ABCF3-211ENST00000475728 FOXO3O43524 673 aa20.51■□□□□ 0.87
ABCF3-211ENST00000475728 DDX17Q92841 729 aaKnown RBP20.51■□□□□ 0.87
ABCF3-211ENST00000475728 CDK19Q9BWU1 502 aa20.49■□□□□ 0.87
ABCF3-211ENST00000475728 PSME1Q06323 249 aa20.48■□□□□ 0.87
ABCF3-211ENST00000475728 UPF1Q92900 1129 aaKnown RBP eCLIP20.48■□□□□ 0.87
ABCF3-211ENST00000475728 NUDT16Q96DE0 195 aaKnown RBP20.47■□□□□ 0.87
ABCF3-211ENST00000475728 SHPRHQ149N8 1683 aa20.47■□□□□ 0.87
ABCF3-211ENST00000475728 EVC2Q86UK5 1308 aa20.46■□□□□ 0.87
ABCF3-211ENST00000475728 PRR36Q9H6K5 1346 aa20.46■□□□□ 0.87
ABCF3-211ENST00000475728 PXDNQ92626 1479 aa20.45■□□□□ 0.86
ABCF3-211ENST00000475728 SRPK2P78362 688 aaKnown RBP20.45■□□□□ 0.86
ABCF3-211ENST00000475728 KRT28Q7Z3Y7 464 aa20.45■□□□□ 0.86
ABCF3-211ENST00000475728 PNPLA6Q8IY17 1366 aa20.45■□□□□ 0.86
ABCF3-211ENST00000475728 CCDC61Q9Y6R9 512 aa20.44■□□□□ 0.86
ABCF3-211ENST00000475728 USP32Q8NFA0 1604 aa20.44■□□□□ 0.86
ABCF3-211ENST00000475728 QRICH2Q9H0J4 1663 aa20.44■□□□□ 0.86
ABCF3-211ENST00000475728 ATP7BP35670 1465 aa20.43■□□□□ 0.86
ABCF3-211ENST00000475728 XPCQ01831 940 aaPredicted RBP20.43■□□□□ 0.86
ABCF3-211ENST00000475728 NGDNQ8NEJ9 315 aaKnown RBP20.43■□□□□ 0.86
ABCF3-211ENST00000475728 PMFBP1Q8TBY8 1022 aa20.43■□□□□ 0.86
ABCF3-211ENST00000475728 SBNO2Q9Y2G9 1366 aa20.43■□□□□ 0.86
ABCF3-211ENST00000475728 SLC24A1O60721 1099 aa20.42■□□□□ 0.86
ABCF3-211ENST00000475728 MEX3CQ5U5Q3 659 aaKnown RBP20.42■□□□□ 0.86
ABCF3-211ENST00000475728 SBNO1A3KN83 1393 aa20.41■□□□□ 0.86
ABCF3-211ENST00000475728 RGPD8O14715 1765 aaPredicted RBP20.4■□□□□ 0.86
ABCF3-211ENST00000475728 ITSN1Q15811 1721 aa20.4■□□□□ 0.86
ABCF3-211ENST00000475728 SPATA31A3Q5VYP0 1347 aa20.4■□□□□ 0.86
ABCF3-211ENST00000475728 PLEKHG3A1L390 1219 aa20.39■□□□□ 0.85
ABCF3-211ENST00000475728 NUTM2BA6NNL0 878 aaPredicted RBP20.39■□□□□ 0.85
ABCF3-211ENST00000475728 NUTM2EB1AL46 878 aaPredicted RBP20.39■□□□□ 0.85
ABCF3-211ENST00000475728 NUTM2AQ8IVF1 878 aaPredicted RBP20.39■□□□□ 0.85
ABCF3-211ENST00000475728 CABP2Q9NPB3 220 aa20.38■□□□□ 0.85
ABCF3-211ENST00000475728 LRP6O75581 1613 aa20.38■□□□□ 0.85
ABCF3-211ENST00000475728 TNS3Q68CZ2 1445 aa20.37■□□□□ 0.85
ABCF3-211ENST00000475728 ARHGEF10O15013 1369 aa20.37■□□□□ 0.85
ABCF3-211ENST00000475728 POLR3AO14802 1390 aaPredicted RBP20.35■□□□□ 0.85
ABCF3-211ENST00000475728 ATAD2Q6PL18 1390 aa20.35■□□□□ 0.85
ABCF3-211ENST00000475728 PPIP5K1Q6PFW1 1433 aa20.35■□□□□ 0.85
ABCF3-211ENST00000475728 COL22A1Q8NFW1 1626 aaPredicted RBP20.35■□□□□ 0.85
ABCF3-211ENST00000475728 ACEP12821 1306 aa20.34■□□□□ 0.85
ABCF3-211ENST00000475728 TOPAZ1Q8N9V7 1692 aa20.33■□□□□ 0.85
ABCF3-211ENST00000475728 ST20-MTHFSA0A0A6YYL1 179 aa20.33■□□□□ 0.85
ABCF3-211ENST00000475728 LMOD2Q6P5Q4 547 aa20.33■□□□□ 0.85
ABCF3-211ENST00000475728 USP47Q96K76 1375 aa20.33■□□□□ 0.84
ABCF3-211ENST00000475728 PUS7Q96PZ0 661 aaKnown RBP20.32■□□□□ 0.84
ABCF3-211ENST00000475728 BRD4O60885 1362 aaPredicted RBP20.32■□□□□ 0.84
ABCF3-211ENST00000475728 PAK3O75914 559 aaPredicted RBP20.3■□□□□ 0.84
ABCF3-211ENST00000475728 ZNF772Q68DY9 489 aaPredicted RBP20.3■□□□□ 0.84
ABCF3-211ENST00000475728 CABP1Q9NZU7 370 aa20.3■□□□□ 0.84
ABCF3-211ENST00000475728 ADAMTS2O95450 1211 aa20.29■□□□□ 0.84
ABCF3-211ENST00000475728 HAP1P54257 671 aaPredicted RBP20.29■□□□□ 0.84
ABCF3-211ENST00000475728 TESK2Q96S53 571 aa20.28■□□□□ 0.84
ABCF3-211ENST00000475728 NGLY1Q96IV0 654 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms