RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 TBC1D2Q9BYX2 928 aa11.12□□□□□ -0.63
LTN1-204ENST00000475344 C6orf229H3BNL8 230 aa11.11□□□□□ -0.63
LTN1-204ENST00000475344 MSS51Q4VC12 460 aa11.11□□□□□ -0.63
LTN1-204ENST00000475344 PLA2G2CQ5R387 149 aa11.11□□□□□ -0.63
LTN1-204ENST00000475344 EMID1Q96A84 441 aaPredicted RBP11.1□□□□□ -0.63
LTN1-204ENST00000475344 PCDHGC3Q9UN70 934 aa11.1□□□□□ -0.63
LTN1-204ENST00000475344 LIAT1Q6ZQX7 453 aa11.09□□□□□ -0.63
LTN1-204ENST00000475344 GFRA3O60609 400 aa11.07□□□□□ -0.64
LTN1-204ENST00000475344 DIXDC1Q155Q3 683 aa11.07□□□□□ -0.64
LTN1-204ENST00000475344 GPBP1L1Q9HC44 474 aaPredicted RBP11.07□□□□□ -0.64
LTN1-204ENST00000475344 SPRYD7Q5W111 196 aa11.06□□□□□ -0.64
LTN1-204ENST00000475344 CCDC24Q8N4L8 307 aa11.06□□□□□ -0.64
LTN1-204ENST00000475344 CSPP1Q1MSJ5 1256 aa11.05□□□□□ -0.64
LTN1-204ENST00000475344 ZBTB24O43167 697 aaPredicted RBP11.04□□□□□ -0.64
LTN1-204ENST00000475344 TPRNQ4KMQ1 711 aa11.04□□□□□ -0.64
LTN1-204ENST00000475344 ZNF697Q5TEC3 545 aa11.04□□□□□ -0.64
LTN1-204ENST00000475344 RSBN1LQ6PCB5 846 aaPredicted RBP11.04□□□□□ -0.64
LTN1-204ENST00000475344 RETREG3Q86VR2 466 aa11.04□□□□□ -0.64
LTN1-204ENST00000475344 MMP16P51512 607 aa11.03□□□□□ -0.64
LTN1-204ENST00000475344 RIC3Q7Z5B4 369 aa11.03□□□□□ -0.64
LTN1-204ENST00000475344 ZNF598Q86UK7 904 aaKnown RBP11.03□□□□□ -0.64
LTN1-204ENST00000475344 KDM4CQ9H3R0 1056 aa11.03□□□□□ -0.64
LTN1-204ENST00000475344 DXOO77932 396 aaKnown RBP11.02□□□□□ -0.65
LTN1-204ENST00000475344 MTMR2Q13614 643 aa11.02□□□□□ -0.65
LTN1-204ENST00000475344 PDZRN3Q9UPQ7 1066 aa11.02□□□□□ -0.65
LTN1-204ENST00000475344 PCDHB15Q9Y5E8 787 aa11.02□□□□□ -0.65
LTN1-204ENST00000475344 JUNDP17535 347 aa11.01□□□□□ -0.65
LTN1-204ENST00000475344 Q6ZNB5 142 aa11.01□□□□□ -0.65
LTN1-204ENST00000475344 MYSM1Q5VVJ2 828 aa11□□□□□ -0.65
LTN1-204ENST00000475344 PRR7Q8TB68 274 aa11□□□□□ -0.65
LTN1-204ENST00000475344 SPTLC1O15269 473 aa10.99□□□□□ -0.65
LTN1-204ENST00000475344 FOXC1Q12948 553 aa10.99□□□□□ -0.65
LTN1-204ENST00000475344 LIMD1Q9UGP4 676 aa10.99□□□□□ -0.65
LTN1-204ENST00000475344 ATP1B4Q9UN42 357 aaPredicted RBP10.99□□□□□ -0.65
LTN1-204ENST00000475344 TNFRSF10AO00220 468 aa10.98□□□□□ -0.65
LTN1-204ENST00000475344 CD2BP2O95400 341 aaKnown RBP10.98□□□□□ -0.65
LTN1-204ENST00000475344 RPIAP49247 311 aa10.98□□□□□ -0.65
LTN1-204ENST00000475344 LAPTM4AQ15012 233 aa10.98□□□□□ -0.65
LTN1-204ENST00000475344 CABLES1Q8TDN4 633 aa10.98□□□□□ -0.65
LTN1-204ENST00000475344 POLR3EQ9NVU0 708 aa10.98□□□□□ -0.65
LTN1-204ENST00000475344 TSC1Q92574 1164 aa10.97□□□□□ -0.65
LTN1-204ENST00000475344 NUDT12Q9BQG2 462 aa10.97□□□□□ -0.65
LTN1-204ENST00000475344 FAM117AQ9C073 453 aa10.97□□□□□ -0.65
LTN1-204ENST00000475344 ZBTB3Q9H5J0 574 aa10.97□□□□□ -0.65
LTN1-204ENST00000475344 NUTM2BA6NNL0 878 aaPredicted RBP10.96□□□□□ -0.65
LTN1-204ENST00000475344 NUTM2EB1AL46 878 aaPredicted RBP10.96□□□□□ -0.65
LTN1-204ENST00000475344 NRG2O14511 850 aaPredicted RBP10.96□□□□□ -0.65
LTN1-204ENST00000475344 HRCP23327 699 aa10.96□□□□□ -0.65
LTN1-204ENST00000475344 NEUROD2Q15784 382 aa10.96□□□□□ -0.65
LTN1-204ENST00000475344 NUTM2DQ5VT03 806 aaPredicted RBP10.96□□□□□ -0.65
LTN1-204ENST00000475344 NUTM2AQ8IVF1 878 aaPredicted RBP10.96□□□□□ -0.65
LTN1-204ENST00000475344 SPDYE5A6NIY4 337 aa10.95□□□□□ -0.66
LTN1-204ENST00000475344 GJA5P36382 358 aa10.95□□□□□ -0.66
LTN1-204ENST00000475344 CLK2P49760 499 aaKnown RBP10.95□□□□□ -0.66
LTN1-204ENST00000475344 TRIM67Q6ZTA4 783 aa10.95□□□□□ -0.66
LTN1-204ENST00000475344 RSPH6AQ9H0K4 717 aa10.95□□□□□ -0.66
LTN1-204ENST00000475344 TRIM32Q13049 653 aa10.94□□□□□ -0.66
LTN1-204ENST00000475344 QPCTQ16769 361 aa10.93□□□□□ -0.66
LTN1-204ENST00000475344 DDRGK1Q96HY6 314 aa10.93□□□□□ -0.66
LTN1-204ENST00000475344 CFAP99D6REC4 459 aa10.92□□□□□ -0.66
LTN1-204ENST00000475344 GDF9O60383 454 aa10.91□□□□□ -0.66
LTN1-204ENST00000475344 CCNYL3P0C7X3 344 aa10.91□□□□□ -0.66
LTN1-204ENST00000475344 PRPF38BQ5VTL8 546 aaKnown RBP10.91□□□□□ -0.66
LTN1-204ENST00000475344 PTPRNQ16849 979 aa10.9□□□□□ -0.66
LTN1-204ENST00000475344 PTCRAQ6ISU1 281 aaPredicted RBP10.9□□□□□ -0.66
LTN1-204ENST00000475344 PKD2L1Q9P0L9 805 aa10.9□□□□□ -0.66
LTN1-204ENST00000475344 PLEKHG3A1L390 1219 aa10.88□□□□□ -0.67
LTN1-204ENST00000475344 CTHP32929 405 aa10.88□□□□□ -0.67
LTN1-204ENST00000475344 PRR20EP86478 221 aa10.88□□□□□ -0.67
LTN1-204ENST00000475344 PRR20CP86479 221 aa10.88□□□□□ -0.67
LTN1-204ENST00000475344 PRR20DP86480 221 aa10.88□□□□□ -0.67
LTN1-204ENST00000475344 PRR20BP86481 221 aa10.88□□□□□ -0.67
LTN1-204ENST00000475344 PRR20AP86496 221 aa10.88□□□□□ -0.67
LTN1-204ENST00000475344 FAM187AA6NFU0 413 aa10.87□□□□□ -0.67
LTN1-204ENST00000475344 LILRB3O75022 631 aa10.87□□□□□ -0.67
LTN1-204ENST00000475344 PKDCCQ504Y2 493 aa10.87□□□□□ -0.67
LTN1-204ENST00000475344 DESI1Q6ICB0 168 aa10.87□□□□□ -0.67
LTN1-204ENST00000475344 RTL5Q5HYW3 569 aaPredicted RBP10.86□□□□□ -0.67
LTN1-204ENST00000475344 KCNH2Q12809 1159 aa10.85□□□□□ -0.67
LTN1-204ENST00000475344 SKIV2LQ15477 1246 aaKnown RBP10.85□□□□□ -0.67
LTN1-204ENST00000475344 TUSC1Q2TAM9 212 aa10.85□□□□□ -0.67
LTN1-204ENST00000475344 SH3D19Q5HYK7 790 aa10.85□□□□□ -0.67
LTN1-204ENST00000475344 CYP4X1Q8N118 509 aa10.85□□□□□ -0.67
LTN1-204ENST00000475344 PROCA1Q8NCQ7 364 aaPredicted RBP10.85□□□□□ -0.67
LTN1-204ENST00000475344 UNC93B1Q9H1C4 597 aa10.85□□□□□ -0.67
LTN1-204ENST00000475344 EVA1BQ9NVM1 165 aa10.85□□□□□ -0.67
LTN1-204ENST00000475344 BRPF1P55201 1214 aaPredicted RBP10.84□□□□□ -0.67
LTN1-204ENST00000475344 LINC01559Q495D7 138 aa10.84□□□□□ -0.67
LTN1-204ENST00000475344 TRAF7Q6Q0C0 670 aa10.84□□□□□ -0.67
LTN1-204ENST00000475344 LYPD8Q6UX82 237 aa10.84□□□□□ -0.67
LTN1-204ENST00000475344 IL27Q8NEV9 243 aa10.84□□□□□ -0.67
LTN1-204ENST00000475344 HELBQ8NG08 1087 aaPredicted RBP10.84□□□□□ -0.67
LTN1-204ENST00000475344 TTC24A2A3L6 582 aaPredicted RBP10.83□□□□□ -0.68
LTN1-204ENST00000475344 PER1O15534 1290 aaPredicted RBP10.83□□□□□ -0.68
LTN1-204ENST00000475344 PRKCSHP14314 528 aaPredicted RBP10.83□□□□□ -0.68
LTN1-204ENST00000475344 SKOR1P84550 965 aa10.83□□□□□ -0.68
LTN1-204ENST00000475344 WNT7AO00755 349 aa10.82□□□□□ -0.68
LTN1-204ENST00000475344 RC3H1Q5TC82 1133 aaKnown RBP10.82□□□□□ -0.68
LTN1-204ENST00000475344 MRGPRX2Q96LB1 330 aa10.82□□□□□ -0.68
LTN1-204ENST00000475344 MAP10Q9P2G4 905 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms