RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 BRWD3Q6RI45 1802 aa21.83■■□□□ 1.09
ATG9A-220ENST00000475339 E9PCH4 1651 aa21.83■■□□□ 1.09
ATG9A-220ENST00000475339 XPCQ01831 940 aaPredicted RBP21.81■■□□□ 1.08
ATG9A-220ENST00000475339 MARF1Q9Y4F3 1742 aaKnown RBP21.8■■□□□ 1.08
ATG9A-220ENST00000475339 BAG6P46379 1132 aa21.8■■□□□ 1.08
ATG9A-220ENST00000475339 ZNF326Q5BKZ1 582 aaKnown RBP21.8■■□□□ 1.08
ATG9A-220ENST00000475339 SLIT2O94813 1529 aa21.79■■□□□ 1.08
ATG9A-220ENST00000475339 NPHP3Q7Z494 1330 aa21.79■■□□□ 1.08
ATG9A-220ENST00000475339 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.78■■□□□ 1.08
ATG9A-220ENST00000475339 R3HDM1Q15032 1099 aaKnown RBP21.78■■□□□ 1.08
ATG9A-220ENST00000475339 KRT27Q7Z3Y8 459 aa21.78■■□□□ 1.08
ATG9A-220ENST00000475339 SPHKAPQ2M3C7 1700 aa21.77■■□□□ 1.08
ATG9A-220ENST00000475339 ESCO1Q5FWF5 840 aa21.77■■□□□ 1.08
ATG9A-220ENST00000475339 ROBO2Q9HCK4 1378 aa21.76■■□□□ 1.07
ATG9A-220ENST00000475339 FOXO3O43524 673 aa21.76■■□□□ 1.07
ATG9A-220ENST00000475339 PXDNQ92626 1479 aa21.76■■□□□ 1.07
ATG9A-220ENST00000475339 EN1Q05925 392 aaPredicted RBP21.74■■□□□ 1.07
ATG9A-220ENST00000475339 ONECUT3O60422 494 aaPredicted RBP21.73■■□□□ 1.07
ATG9A-220ENST00000475339 IQGAP3Q86VI3 1631 aa21.73■■□□□ 1.07
ATG9A-220ENST00000475339 FAM50AQ14320 339 aaKnown RBP21.71■■□□□ 1.07
ATG9A-220ENST00000475339 VPS72Q15906 364 aa21.71■■□□□ 1.07
ATG9A-220ENST00000475339 CCDC9Q9Y3X0 531 aaKnown RBP21.71■■□□□ 1.07
ATG9A-220ENST00000475339 A0A0G2JS52 829 aa21.67■■□□□ 1.06
ATG9A-220ENST00000475339 MYT1Q01538 1121 aa21.67■■□□□ 1.06
ATG9A-220ENST00000475339 NUP155O75694 1391 aa21.66■■□□□ 1.06
ATG9A-220ENST00000475339 APLP2Q06481 763 aa21.65■■□□□ 1.06
ATG9A-220ENST00000475339 LRPPRCP42704 1394 aaKnown RBP21.64■■□□□ 1.06
ATG9A-220ENST00000475339 NEXMIFQ5QGS0 1516 aa21.64■■□□□ 1.05
ATG9A-220ENST00000475339 SPATA31A3Q5VYP0 1347 aa21.63■■□□□ 1.05
ATG9A-220ENST00000475339 NUTM2FA1L443 756 aa21.63■■□□□ 1.05
ATG9A-220ENST00000475339 HFM1A2PYH4 1435 aa21.63■■□□□ 1.05
ATG9A-220ENST00000475339 USP32Q8NFA0 1604 aa21.62■■□□□ 1.05
ATG9A-220ENST00000475339 FAM182BQ5T319 152 aa21.62■■□□□ 1.05
ATG9A-220ENST00000475339 PLEKHG5O94827 1062 aa21.61■■□□□ 1.05
ATG9A-220ENST00000475339 HAP1P54257 671 aaPredicted RBP21.61■■□□□ 1.05
ATG9A-220ENST00000475339 CABLES1Q8TDN4 633 aa21.61■■□□□ 1.05
ATG9A-220ENST00000475339 EZH2Q15910 746 aaKnown RBP21.6■■□□□ 1.05
ATG9A-220ENST00000475339 FAM98CQ17RN3 349 aaKnown RBP21.6■■□□□ 1.05
ATG9A-220ENST00000475339 PRAG1Q86YV5 1406 aa21.58■■□□□ 1.05
ATG9A-220ENST00000475339 CDC42BPGQ6DT37 1551 aa21.57■■□□□ 1.04
ATG9A-220ENST00000475339 IFFO2Q5TF58 517 aa21.57■■□□□ 1.04
ATG9A-220ENST00000475339 DISP2A7MBM2 1401 aa21.55■■□□□ 1.04
ATG9A-220ENST00000475339 KRT28Q7Z3Y7 464 aa21.55■■□□□ 1.04
ATG9A-220ENST00000475339 RGPD1P0DJD0 1748 aa21.55■■□□□ 1.04
ATG9A-220ENST00000475339 PLCH1Q4KWH8 1693 aa21.53■■□□□ 1.04
ATG9A-220ENST00000475339 FAM83GA6ND36 823 aa21.53■■□□□ 1.04
ATG9A-220ENST00000475339 VGFO15240 615 aaPredicted RBP21.53■■□□□ 1.04
ATG9A-220ENST00000475339 CAMKK2Q96RR4 588 aa21.53■■□□□ 1.04
ATG9A-220ENST00000475339 NAIPQ13075 1403 aa21.53■■□□□ 1.04
ATG9A-220ENST00000475339 NWD2Q9ULI1 1742 aa21.52■■□□□ 1.04
ATG9A-220ENST00000475339 DCAF8L1A6NGE4 600 aa21.52■■□□□ 1.04
ATG9A-220ENST00000475339 CCDC144AA2RUR9 1427 aa21.51■■□□□ 1.03
ATG9A-220ENST00000475339 CLTCL1P53675 1640 aa21.51■■□□□ 1.03
ATG9A-220ENST00000475339 SENP3-EIF4A1A0A087X0R7 540 aa21.49■■□□□ 1.03
ATG9A-220ENST00000475339 WAPLQ7Z5K2 1190 aa21.49■■□□□ 1.03
ATG9A-220ENST00000475339 PPP1R1BQ9UD71 204 aaPredicted RBP21.49■■□□□ 1.03
ATG9A-220ENST00000475339 ROCK1Q13464 1354 aa21.48■■□□□ 1.03
ATG9A-220ENST00000475339 LMOD2Q6P5Q4 547 aa21.48■■□□□ 1.03
ATG9A-220ENST00000475339 TNS3Q68CZ2 1445 aa21.47■■□□□ 1.03
ATG9A-220ENST00000475339 TNS1Q9HBL0 1735 aaKnown RBP21.47■■□□□ 1.03
ATG9A-220ENST00000475339 TRIM37O94972 964 aa21.47■■□□□ 1.03
ATG9A-220ENST00000475339 BTG4Q9NY30 223 aa21.47■■□□□ 1.03
ATG9A-220ENST00000475339 ZNF784Q8NCA9 323 aaPredicted RBP21.46■■□□□ 1.03
ATG9A-220ENST00000475339 APBA3O96018 575 aa21.44■■□□□ 1.02
ATG9A-220ENST00000475339 PSME1Q06323 249 aa21.44■■□□□ 1.02
ATG9A-220ENST00000475339 SPON1Q9HCB6 807 aa21.44■■□□□ 1.02
ATG9A-220ENST00000475339 STK26Q9P289 416 aa21.44■■□□□ 1.02
ATG9A-220ENST00000475339 NINLQ9Y2I6 1382 aa21.42■■□□□ 1.02
ATG9A-220ENST00000475339 KIF1AQ12756 1690 aa21.41■■□□□ 1.02
ATG9A-220ENST00000475339 PARD3Q8TEW0 1356 aa21.41■■□□□ 1.02
ATG9A-220ENST00000475339 PLEKHH1Q9ULM0 1364 aa21.41■■□□□ 1.02
ATG9A-220ENST00000475339 SPATA31A5Q5VU36 1347 aa21.41■■□□□ 1.02
ATG9A-220ENST00000475339 SPATA31A7Q8IWB4 1347 aa21.41■■□□□ 1.02
ATG9A-220ENST00000475339 PHF8Q9UPP1 1060 aa21.41■■□□□ 1.02
ATG9A-220ENST00000475339 KIF1BO60333 1816 aa21.41■■□□□ 1.02
ATG9A-220ENST00000475339 NRAPQ86VF7 1730 aa21.41■■□□□ 1.02
ATG9A-220ENST00000475339 KCNQ2O43526 872 aa21.4■■□□□ 1.02
ATG9A-220ENST00000475339 UTRNP46939 3433 aa21.39■■□□□ 1.02
ATG9A-220ENST00000475339 SBNO1A3KN83 1393 aa21.39■■□□□ 1.02
ATG9A-220ENST00000475339 ABCA3Q99758 1704 aa21.39■■□□□ 1.01
ATG9A-220ENST00000475339 NBPF8Q3BBV2 869 aa21.39■■□□□ 1.01
ATG9A-220ENST00000475339 NBPF14Q5TI25 921 aa21.39■■□□□ 1.01
ATG9A-220ENST00000475339 FAM196AQ6ZSG2 479 aa21.39■■□□□ 1.01
ATG9A-220ENST00000475339 ADGRB2O60241 1585 aa21.39■■□□□ 1.01
ATG9A-220ENST00000475339 ARHGEF10O15013 1369 aa21.38■■□□□ 1.01
ATG9A-220ENST00000475339 CAMTA1Q9Y6Y1 1673 aa21.38■■□□□ 1.01
ATG9A-220ENST00000475339 RPGRIP1LQ68CZ1 1315 aa21.38■■□□□ 1.01
ATG9A-220ENST00000475339 ITGAEP38570 1179 aa21.37■■□□□ 1.01
ATG9A-220ENST00000475339 C1QTNF8P60827 252 aa21.37■■□□□ 1.01
ATG9A-220ENST00000475339 FMN2Q9NZ56 1722 aa21.37■■□□□ 1.01
ATG9A-220ENST00000475339 THSD7AQ9UPZ6 1657 aa21.35■■□□□ 1.01
ATG9A-220ENST00000475339 TECPR2O15040 1411 aa21.35■■□□□ 1.01
ATG9A-220ENST00000475339 TMEM132EQ6IEE7 984 aa21.32■■□□□ 1
ATG9A-220ENST00000475339 NUP188Q5SRE5 1749 aa21.32■■□□□ 1
ATG9A-220ENST00000475339 RREB1Q92766 1687 aa21.31■■□□□ 1
ATG9A-220ENST00000475339 ABCC11Q96J66 1382 aa21.31■■□□□ 1
ATG9A-220ENST00000475339 ADGRF5Q8IZF2 1346 aa21.3■■□□□ 1
ATG9A-220ENST00000475339 NRXN1Q9ULB1 1477 aa21.3■■□□□ 1
ATG9A-220ENST00000475339 RGPD8O14715 1765 aaPredicted RBP21.3■■□□□ 1
ATG9A-220ENST00000475339 COL14A1Q05707 1796 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms