RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 DUSP27Q5VZP5 1158 aa16.87■□□□□ 0.29
CCNL1-216ENST00000475298 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
CCNL1-216ENST00000475298 ABCC3O15438 1527 aa16.87■□□□□ 0.29
CCNL1-216ENST00000475298 ZNF521Q96K83 1311 aa16.86■□□□□ 0.29
CCNL1-216ENST00000475298 MYO3AQ8NEV4 1616 aa16.86■□□□□ 0.29
CCNL1-216ENST00000475298 SKAP1Q86WV1 359 aa16.86■□□□□ 0.29
CCNL1-216ENST00000475298 SIGLEC1Q9BZZ2 1709 aa16.85■□□□□ 0.29
CCNL1-216ENST00000475298 C14orf93Q9H972 538 aaKnown RBP16.85■□□□□ 0.29
CCNL1-216ENST00000475298 APAF1O14727 1248 aa16.84■□□□□ 0.29
CCNL1-216ENST00000475298 SETBP1Q9Y6X0 1596 aa16.84■□□□□ 0.29
CCNL1-216ENST00000475298 GOLGA2Q08379 1002 aa16.84■□□□□ 0.29
CCNL1-216ENST00000475298 SLC12A5Q9H2X9 1139 aa16.84■□□□□ 0.29
CCNL1-216ENST00000475298 ADGRB1O14514 1584 aa16.83■□□□□ 0.29
CCNL1-216ENST00000475298 SPINK5Q9NQ38 1064 aaPredicted RBP16.83■□□□□ 0.28
CCNL1-216ENST00000475298 QRICH2Q9H0J4 1663 aa16.83■□□□□ 0.28
CCNL1-216ENST00000475298 CAMSAP1Q5T5Y3 1602 aa16.83■□□□□ 0.28
CCNL1-216ENST00000475298 SBNO2Q9Y2G9 1366 aa16.83■□□□□ 0.28
CCNL1-216ENST00000475298 TNNT2P45379 298 aaPredicted RBP16.82■□□□□ 0.28
CCNL1-216ENST00000475298 SLC24A1O60721 1099 aa16.82■□□□□ 0.28
CCNL1-216ENST00000475298 NSD3Q9BZ95 1437 aa16.81■□□□□ 0.28
CCNL1-216ENST00000475298 ZC3H13Q5T200 1668 aaKnown RBP16.81■□□□□ 0.28
CCNL1-216ENST00000475298 PLEKHG5O94827 1062 aa16.8■□□□□ 0.28
CCNL1-216ENST00000475298 SLFN5Q08AF3 891 aa16.8■□□□□ 0.28
CCNL1-216ENST00000475298 DIP2CQ9Y2E4 1556 aa16.8■□□□□ 0.28
CCNL1-216ENST00000475298 DMRT2Q9Y5R5 561 aa16.79■□□□□ 0.28
CCNL1-216ENST00000475298 PODXL2Q9NZ53 605 aa16.78■□□□□ 0.28
CCNL1-216ENST00000475298 NEO1Q92859 1461 aa16.78■□□□□ 0.28
CCNL1-216ENST00000475298 YEATS2Q9ULM3 1422 aa16.77■□□□□ 0.28
CCNL1-216ENST00000475298 RRP9O43818 475 aaKnown RBP16.77■□□□□ 0.28
CCNL1-216ENST00000475298 HSP90AA2PQ14568 343 aaPredicted RBP16.77■□□□□ 0.28
CCNL1-216ENST00000475298 SAFB2Q14151 953 aaKnown RBP eCLIP16.77■□□□□ 0.27
CCNL1-216ENST00000475298 MORC1Q86VD1 984 aa16.77■□□□□ 0.27
CCNL1-216ENST00000475298 RPGRIP1LQ68CZ1 1315 aa16.76■□□□□ 0.27
CCNL1-216ENST00000475298 GLI2P10070 1586 aa16.76■□□□□ 0.27
CCNL1-216ENST00000475298 DAXXQ9UER7 740 aaPredicted RBP16.76■□□□□ 0.27
CCNL1-216ENST00000475298 PIK3C2BO00750 1634 aa16.76■□□□□ 0.27
CCNL1-216ENST00000475298 IDI1Q13907 227 aa16.75■□□□□ 0.27
CCNL1-216ENST00000475298 NEXMIFQ5QGS0 1516 aa16.75■□□□□ 0.27
CCNL1-216ENST00000475298 TRHP20396 242 aaPredicted RBP16.75■□□□□ 0.27
CCNL1-216ENST00000475298 TRMT2AQ8IZ69 625 aaKnown RBP16.75■□□□□ 0.27
CCNL1-216ENST00000475298 RICTORQ6R327 1708 aa16.74■□□□□ 0.27
CCNL1-216ENST00000475298 POGKQ9P215 609 aa16.74■□□□□ 0.27
CCNL1-216ENST00000475298 POLR3AO14802 1390 aaPredicted RBP16.73■□□□□ 0.27
CCNL1-216ENST00000475298 BCAR3O75815 825 aa16.73■□□□□ 0.27
CCNL1-216ENST00000475298 CYB5RLQ6IPT4 315 aa16.73■□□□□ 0.27
CCNL1-216ENST00000475298 ARHGEF28Q8N1W1 1705 aaKnown RBP16.73■□□□□ 0.27
CCNL1-216ENST00000475298 TULP4Q9NRJ4 1543 aa16.72■□□□□ 0.27
CCNL1-216ENST00000475298 VGFO15240 615 aaPredicted RBP16.72■□□□□ 0.27
CCNL1-216ENST00000475298 CABP2Q9NPB3 220 aa16.72■□□□□ 0.27
CCNL1-216ENST00000475298 STK26Q9P289 416 aa16.72■□□□□ 0.27
CCNL1-216ENST00000475298 SHPRHQ149N8 1683 aa16.72■□□□□ 0.27
CCNL1-216ENST00000475298 NEUROD2Q15784 382 aa16.72■□□□□ 0.27
CCNL1-216ENST00000475298 RRP7AQ9Y3A4 280 aaKnown RBP16.72■□□□□ 0.27
CCNL1-216ENST00000475298 NKTRP30414 1462 aaKnown RBP16.72■□□□□ 0.27
CCNL1-216ENST00000475298 NAP1L5Q96NT1 182 aaPredicted RBP16.71■□□□□ 0.27
CCNL1-216ENST00000475298 MYO5BQ9ULV0 1848 aa16.71■□□□□ 0.27
CCNL1-216ENST00000475298 HSP90AA1P07900 732 aaKnown RBP16.7■□□□□ 0.26
CCNL1-216ENST00000475298 C8orf34Q49A92 452 aa16.7■□□□□ 0.26
CCNL1-216ENST00000475298 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
CCNL1-216ENST00000475298 E9PSI1 815 aa16.7■□□□□ 0.26
CCNL1-216ENST00000475298 EVC2Q86UK5 1308 aa16.69■□□□□ 0.26
CCNL1-216ENST00000475298 MTHFSP49914 203 aa16.69■□□□□ 0.26
CCNL1-216ENST00000475298 WWC1Q8IX03 1113 aa16.69■□□□□ 0.26
CCNL1-216ENST00000475298 CGNL1Q0VF96 1302 aa16.68■□□□□ 0.26
CCNL1-216ENST00000475298 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.68■□□□□ 0.26
CCNL1-216ENST00000475298 ARHGAP31Q2M1Z3 1444 aa16.68■□□□□ 0.26
CCNL1-216ENST00000475298 CLCN1P35523 988 aa16.67■□□□□ 0.26
CCNL1-216ENST00000475298 FBXO31Q5XUX0 539 aaPredicted RBP16.67■□□□□ 0.26
CCNL1-216ENST00000475298 PNNQ9H307 717 aaKnown RBP16.67■□□□□ 0.26
CCNL1-216ENST00000475298 FAM161AQ3B820 660 aa16.66■□□□□ 0.26
CCNL1-216ENST00000475298 L1TD1Q5T7N2 865 aaKnown RBP16.66■□□□□ 0.26
CCNL1-216ENST00000475298 ANKRD36BQ8N2N9 1353 aa16.65■□□□□ 0.26
CCNL1-216ENST00000475298 PREX1Q8TCU6 1659 aa16.65■□□□□ 0.26
CCNL1-216ENST00000475298 TCP11L2Q8N4U5 519 aa16.65■□□□□ 0.26
CCNL1-216ENST00000475298 USP32Q8NFA0 1604 aa16.65■□□□□ 0.26
CCNL1-216ENST00000475298 SLC52A1Q9NWF4 448 aa16.64■□□□□ 0.25
CCNL1-216ENST00000475298 SRPK2P78362 688 aaKnown RBP16.64■□□□□ 0.25
CCNL1-216ENST00000475298 RUNDC1Q96C34 613 aa16.64■□□□□ 0.25
CCNL1-216ENST00000475298 CENPQQ7L2Z9 268 aaPredicted RBP16.63■□□□□ 0.25
CCNL1-216ENST00000475298 TMEM131LA2VDJ0 1609 aa16.63■□□□□ 0.25
CCNL1-216ENST00000475298 MINK1Q8N4C8 1332 aaPredicted RBP16.63■□□□□ 0.25
CCNL1-216ENST00000475298 IQSEC2Q5JU85 1478 aa16.62■□□□□ 0.25
CCNL1-216ENST00000475298 A0A1W2PP64 1363 aa16.62■□□□□ 0.25
CCNL1-216ENST00000475298 FAM69CQ0P6D2 419 aa16.61■□□□□ 0.25
CCNL1-216ENST00000475298 PRAM1Q96QH2 718 aa16.61■□□□□ 0.25
CCNL1-216ENST00000475298 XRCC6P12956 609 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCNL1-216ENST00000475298 NGEFQ8N5V2 710 aa16.6■□□□□ 0.25
CCNL1-216ENST00000475298 GGNBP2Q9H3C7 697 aa16.6■□□□□ 0.25
CCNL1-216ENST00000475298 ZFYVE9O95405 1425 aa16.6■□□□□ 0.25
CCNL1-216ENST00000475298 CFAP53Q96M91 514 aa16.6■□□□□ 0.25
CCNL1-216ENST00000475298 PTPRMP28827 1452 aa16.6■□□□□ 0.25
CCNL1-216ENST00000475298 U2AF1L5P0DN76 240 aaPredicted RBP16.59■□□□□ 0.25
CCNL1-216ENST00000475298 U2AF1Q01081 240 aaKnown RBP eCLIP16.59■□□□□ 0.253e-15■■■■□ 23.4
CCNL1-216ENST00000475298 PANK1Q8TE04 598 aa16.59■□□□□ 0.25
CCNL1-216ENST00000475298 PUS7Q96PZ0 661 aaKnown RBP16.59■□□□□ 0.25
CCNL1-216ENST00000475298 TSPOAP1O95153 1857 aa16.59■□□□□ 0.25
CCNL1-216ENST00000475298 CANXP27824 592 aaKnown RBP16.58■□□□□ 0.25
CCNL1-216ENST00000475298 RGS3P49796 1198 aa16.58■□□□□ 0.25
CCNL1-216ENST00000475298 COG6Q9Y2V7 657 aa16.58■□□□□ 0.24
CCNL1-216ENST00000475298 BCL2L13Q9BXK5 485 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms