RNA–Protein interactions for RNA: ENST00000475087.5

COCH-205, Transcript of cochlin, humanhuman

TSL 1 (best) BASIC

Gene COCH, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-205ENST00000475087 KIF7Q2M1P5 1343 aa29.45■■■□□ 2.3
COCH-205ENST00000475087 CCDC7Q96M83 1385 aa29.44■■■□□ 2.3
COCH-205ENST00000475087 MINK1Q8N4C8 1332 aaPredicted RBP29.44■■■□□ 2.3
COCH-205ENST00000475087 NKTRP30414 1462 aaKnown RBP29.42■■■□□ 2.3
COCH-205ENST00000475087 EVC2Q86UK5 1308 aa29.4■■■□□ 2.3
COCH-205ENST00000475087 STRCP1A6NGW2 1772 aa29.4■■■□□ 2.3
COCH-205ENST00000475087 CDCA8Q53HL2 280 aa29.39■■■□□ 2.3
COCH-205ENST00000475087 TULP4Q9NRJ4 1543 aa29.39■■■□□ 2.3
COCH-205ENST00000475087 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.39■■■□□ 2.3
COCH-205ENST00000475087 ZNF335Q9H4Z2 1342 aaPredicted RBP29.36■■■□□ 2.29
COCH-205ENST00000475087 PROSER2Q86WR7 435 aaPredicted RBP29.35■■■□□ 2.29
COCH-205ENST00000475087 ADGRB2O60241 1585 aa29.34■■■□□ 2.29
COCH-205ENST00000475087 PUS7Q96PZ0 661 aaKnown RBP29.34■■■□□ 2.29
COCH-205ENST00000475087 POLR3GLQ9BT43 218 aa29.33■■■□□ 2.29
COCH-205ENST00000475087 WASLO00401 505 aaPredicted RBP29.32■■■□□ 2.28
COCH-205ENST00000475087 RBM33Q96EV2 1170 aaKnown RBP29.32■■■□□ 2.28
COCH-205ENST00000475087 CDK19Q9BWU1 502 aa29.32■■■□□ 2.28
COCH-205ENST00000475087 CABP2Q9NPB3 220 aa29.29■■■□□ 2.28
COCH-205ENST00000475087 NCOA3Q9Y6Q9 1424 aa29.29■■■□□ 2.28
COCH-205ENST00000475087 SRPK2P78362 688 aaKnown RBP29.28■■■□□ 2.28
COCH-205ENST00000475087 DDX10Q13206 875 aaKnown RBP29.28■■■□□ 2.28
COCH-205ENST00000475087 ADGRL3Q9HAR2 1447 aa29.28■■■□□ 2.28
COCH-205ENST00000475087 TMEM94Q12767 1356 aa29.27■■■□□ 2.28
COCH-205ENST00000475087 NALCNQ8IZF0 1738 aa29.26■■■□□ 2.28
COCH-205ENST00000475087 LRRC7Q96NW7 1537 aa29.24■■■□□ 2.27
COCH-205ENST00000475087 C14orf37Q86TY3 774 aa29.23■■■□□ 2.27
COCH-205ENST00000475087 ATAD2Q6PL18 1390 aa29.23■■■□□ 2.27
COCH-205ENST00000475087 CDC42BPGQ6DT37 1551 aa29.22■■■□□ 2.27
COCH-205ENST00000475087 C19orf44Q9H6X5 657 aa29.21■■■□□ 2.27
COCH-205ENST00000475087 MYOM1P52179 1685 aa29.18■■■□□ 2.26
COCH-205ENST00000475087 NUDT16Q96DE0 195 aaKnown RBP29.18■■■□□ 2.26
COCH-205ENST00000475087 PRR36Q9H6K5 1346 aa29.17■■■□□ 2.26
COCH-205ENST00000475087 LTBP4Q8N2S1 1624 aa29.17■■■□□ 2.26
COCH-205ENST00000475087 ATP7BP35670 1465 aa29.16■■■□□ 2.26
COCH-205ENST00000475087 XIRP1Q702N8 1843 aaKnown RBP29.16■■■□□ 2.26
COCH-205ENST00000475087 FMN2Q9NZ56 1722 aa29.15■■■□□ 2.26
COCH-205ENST00000475087 NINLQ9Y2I6 1382 aa29.15■■■□□ 2.26
COCH-205ENST00000475087 TMC1Q8TDI8 760 aa29.15■■■□□ 2.26
COCH-205ENST00000475087 SLC12A5Q9H2X9 1139 aa29.15■■■□□ 2.26
COCH-205ENST00000475087 CCDC61Q9Y6R9 512 aa29.15■■■□□ 2.26
COCH-205ENST00000475087 DCCP43146 1447 aa29.13■■■□□ 2.25
COCH-205ENST00000475087 ANKARQ7Z5J8 1434 aa29.13■■■□□ 2.25
COCH-205ENST00000475087 NUTM2FA1L443 756 aa29.13■■■□□ 2.25
COCH-205ENST00000475087 DIEXFQ68CQ4 756 aaKnown RBP29.13■■■□□ 2.25
COCH-205ENST00000475087 MSH6P52701 1360 aa29.12■■■□□ 2.25
COCH-205ENST00000475087 PANK3Q9H999 370 aa29.12■■■□□ 2.25
COCH-205ENST00000475087 CABP1Q9NZU7 370 aa29.12■■■□□ 2.25
COCH-205ENST00000475087 USP32Q8NFA0 1604 aa29.12■■■□□ 2.25
COCH-205ENST00000475087 PPIP5K1Q6PFW1 1433 aa29.09■■■□□ 2.25
COCH-205ENST00000475087 ATF3P18847 181 aa29.08■■■□□ 2.25
COCH-205ENST00000475087 TOPAZ1Q8N9V7 1692 aa29.07■■■□□ 2.24
COCH-205ENST00000475087 CADPS2Q86UW7 1296 aa29.07■■■□□ 2.24
COCH-205ENST00000475087 ANKRD36BQ8N2N9 1353 aa29.06■■■□□ 2.24
COCH-205ENST00000475087 PLEKHG3A1L390 1219 aa29.05■■■□□ 2.24
COCH-205ENST00000475087 PER1O15534 1290 aaPredicted RBP29.04■■■□□ 2.24
COCH-205ENST00000475087 CD163L1Q9NR16 1453 aa29.04■■■□□ 2.24
COCH-205ENST00000475087 RGPD8O14715 1765 aaPredicted RBP29.03■■■□□ 2.24
COCH-205ENST00000475087 TERF2IPQ9NYB0 399 aa29.03■■■□□ 2.24
COCH-205ENST00000475087 ITSN1Q15811 1721 aa29.03■■■□□ 2.24
COCH-205ENST00000475087 MST1RQ04912 1400 aa29.02■■■□□ 2.24
COCH-205ENST00000475087 CARD14Q9BXL6 1004 aa29.01■■■□□ 2.23
COCH-205ENST00000475087 A0A1W2PP64 1363 aa29.01■■■□□ 2.23
COCH-205ENST00000475087 C1orf167Q5SNV9 1468 aa29.01■■■□□ 2.23
COCH-205ENST00000475087 CPSF1Q10570 1443 aaKnown RBP29■■■□□ 2.23
COCH-205ENST00000475087 HDGFL2Q7Z4V5 671 aaPredicted RBP29■■■□□ 2.23
COCH-205ENST00000475087 ACEP12821 1306 aa28.97■■■□□ 2.23
COCH-205ENST00000475087 ESCO1Q5FWF5 840 aa28.97■■■□□ 2.23
COCH-205ENST00000475087 PMFBP1Q8TBY8 1022 aa28.97■■■□□ 2.23
COCH-205ENST00000475087 ZNF692Q9BU19 519 aaPredicted RBP28.97■■■□□ 2.23
COCH-205ENST00000475087 POLR3AO14802 1390 aaPredicted RBP28.96■■■□□ 2.23
COCH-205ENST00000475087 PHF8Q9UPP1 1060 aa28.96■■■□□ 2.23
COCH-205ENST00000475087 KNSTRNQ9Y448 316 aa28.96■■■□□ 2.23
COCH-205ENST00000475087 ORAI2Q96SN7 254 aa28.95■■■□□ 2.23
COCH-205ENST00000475087 NSD3Q9BZ95 1437 aa28.93■■■□□ 2.22
COCH-205ENST00000475087 KTN1Q86UP2 1357 aaKnown RBP28.93■■■□□ 2.22
COCH-205ENST00000475087 NGDNQ8NEJ9 315 aaKnown RBP28.93■■■□□ 2.22
COCH-205ENST00000475087 SLAIN2Q9P270 581 aa28.92■■■□□ 2.22
COCH-205ENST00000475087 AKAP12Q02952 1782 aa28.92■■■□□ 2.22
COCH-205ENST00000475087 AMER1Q5JTC6 1135 aaPredicted RBP28.9■■■□□ 2.22
COCH-205ENST00000475087 MON2Q7Z3U7 1717 aa28.88■■■□□ 2.21
COCH-205ENST00000475087 USP6P35125 1406 aa28.88■■■□□ 2.21
COCH-205ENST00000475087 EDC4Q6P2E9 1401 aaKnown RBP28.88■■■□□ 2.21
COCH-205ENST00000475087 NPC1L1Q9UHC9 1359 aa28.87■■■□□ 2.21
COCH-205ENST00000475087 KIF1AQ12756 1690 aa28.87■■■□□ 2.21
COCH-205ENST00000475087 ANP32CO43423 234 aa28.86■■■□□ 2.21
COCH-205ENST00000475087 CGNL1Q0VF96 1302 aa28.86■■■□□ 2.21
COCH-205ENST00000475087 IQSEC2Q5JU85 1478 aa28.84■■■□□ 2.21
COCH-205ENST00000475087 SSH2Q76I76 1423 aa28.84■■■□□ 2.21
COCH-205ENST00000475087 FOXO3O43524 673 aa28.83■■■□□ 2.21
COCH-205ENST00000475087 BRINP3Q76B58 766 aa28.83■■■□□ 2.21
COCH-205ENST00000475087 CC2D1BQ5T0F9 858 aaKnown RBP28.82■■■□□ 2.2
COCH-205ENST00000475087 PRKRIP1Q9H875 184 aaPredicted RBP28.82■■■□□ 2.2
COCH-205ENST00000475087 NRKQ7Z2Y5 1582 aa28.82■■■□□ 2.2
COCH-205ENST00000475087 TTC21BQ7Z4L5 1316 aa28.81■■■□□ 2.2
COCH-205ENST00000475087 PSME1Q06323 249 aa28.81■■■□□ 2.2
COCH-205ENST00000475087 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.81■■■□□ 2.2
COCH-205ENST00000475087 CERKQ8TCT0 537 aa28.81■■■□□ 2.2
COCH-205ENST00000475087 BRD4O60885 1362 aaPredicted RBP28.8■■■□□ 2.2
COCH-205ENST00000475087 CNGB1Q14028 1251 aaPredicted RBP28.8■■■□□ 2.2
COCH-205ENST00000475087 FYB1O15117 783 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms