RNA–Protein interactions for RNA: ENST00000474557.1

HMGN1P10-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 10, humanhuman

BASIC

Gene HMGN1P10, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P10-201ENST00000474557 H3BM21 787 aa9.43□□□□□ -0.9
HMGN1P10-201ENST00000474557 PXYLP1Q8TE99 480 aa9.43□□□□□ -0.9
HMGN1P10-201ENST00000474557 SLC27A5Q9Y2P5 690 aa9.43□□□□□ -0.9
HMGN1P10-201ENST00000474557 FECHP22830 423 aa9.42□□□□□ -0.9
HMGN1P10-201ENST00000474557 FUT2Q10981 343 aa9.42□□□□□ -0.9
HMGN1P10-201ENST00000474557 PRDM9Q9NQV7 894 aa9.42□□□□□ -0.9
HMGN1P10-201ENST00000474557 FCHSD2O94868 740 aa9.41□□□□□ -0.9
HMGN1P10-201ENST00000474557 GRIPAP1Q4V328 841 aa9.41□□□□□ -0.9
HMGN1P10-201ENST00000474557 BRICD5Q6PL45 260 aa9.41□□□□□ -0.9
HMGN1P10-201ENST00000474557 MLLT3P42568 568 aaPredicted RBP9.39□□□□□ -0.91
HMGN1P10-201ENST00000474557 VEGFBP49765 207 aa9.39□□□□□ -0.91
HMGN1P10-201ENST00000474557 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.39□□□□□ -0.91
HMGN1P10-201ENST00000474557 KCNMA1Q12791 1236 aa9.38□□□□□ -0.91
HMGN1P10-201ENST00000474557 KCTD17Q8N5Z5 321 aa9.38□□□□□ -0.91
HMGN1P10-201ENST00000474557 ALDH1A1P00352 501 aa9.37□□□□□ -0.91
HMGN1P10-201ENST00000474557 Q3C1V9 767 aa9.37□□□□□ -0.91
HMGN1P10-201ENST00000474557 RC3H1Q5TC82 1133 aaKnown RBP9.37□□□□□ -0.91
HMGN1P10-201ENST00000474557 DAXXQ9UER7 740 aaPredicted RBP9.37□□□□□ -0.91
HMGN1P10-201ENST00000474557 WNT7BP56706 349 aa9.36□□□□□ -0.91
HMGN1P10-201ENST00000474557 SULF1Q8IWU6 871 aa9.36□□□□□ -0.91
HMGN1P10-201ENST00000474557 ERBB4Q15303 1308 aa9.35□□□□□ -0.91
HMGN1P10-201ENST00000474557 DDX11L8A8MPP1 907 aa9.35□□□□□ -0.91
HMGN1P10-201ENST00000474557 CAPN5O15484 640 aaPredicted RBP9.35□□□□□ -0.91
HMGN1P10-201ENST00000474557 METTL3Q86U44 580 aaKnown RBP9.35□□□□□ -0.91
HMGN1P10-201ENST00000474557 ARHGEF1Q92888 912 aaKnown RBP9.35□□□□□ -0.91
HMGN1P10-201ENST00000474557 GCGRP47871 477 aa9.34□□□□□ -0.91
HMGN1P10-201ENST00000474557 MMP16P51512 607 aa9.34□□□□□ -0.91
HMGN1P10-201ENST00000474557 TMEM151AQ8N4L1 468 aa9.34□□□□□ -0.91
HMGN1P10-201ENST00000474557 WASF2Q9Y6W5 498 aa9.34□□□□□ -0.91
HMGN1P10-201ENST00000474557 BMP1P13497 986 aa9.32□□□□□ -0.92
HMGN1P10-201ENST00000474557 RNF225M0QZC1 329 aaPredicted RBP9.31□□□□□ -0.92
HMGN1P10-201ENST00000474557 RNF19BQ6ZMZ0 732 aa9.31□□□□□ -0.92
HMGN1P10-201ENST00000474557 CCDC24Q8N4L8 307 aa9.31□□□□□ -0.92
HMGN1P10-201ENST00000474557 TRIM46Q7Z4K8 759 aa9.3□□□□□ -0.92
HMGN1P10-201ENST00000474557 GDF11O95390 407 aa9.29□□□□□ -0.92
HMGN1P10-201ENST00000474557 HIC1Q14526 733 aa9.28□□□□□ -0.92
HMGN1P10-201ENST00000474557 EHBP1Q8NDI1 1231 aa9.27□□□□□ -0.93
HMGN1P10-201ENST00000474557 USB1Q9BQ65 265 aaKnown RBP9.27□□□□□ -0.93
HMGN1P10-201ENST00000474557 DXOO77932 396 aaKnown RBP9.26□□□□□ -0.93
HMGN1P10-201ENST00000474557 SKOR1P84550 965 aa9.26□□□□□ -0.93
HMGN1P10-201ENST00000474557 ZFP42Q96MM3 310 aa9.26□□□□□ -0.93
HMGN1P10-201ENST00000474557 VSIG8P0DPA2 414 aa9.25□□□□□ -0.93
HMGN1P10-201ENST00000474557 RASSF7Q02833 373 aa9.25□□□□□ -0.93
HMGN1P10-201ENST00000474557 SCARF1Q14162 830 aa9.25□□□□□ -0.93
HMGN1P10-201ENST00000474557 CFAP44Q96MT7 982 aa9.22□□□□□ -0.93
HMGN1P10-201ENST00000474557 GSK3AP49840 483 aa9.2□□□□□ -0.94
HMGN1P10-201ENST00000474557 SIAH2O43255 324 aa9.19□□□□□ -0.94
HMGN1P10-201ENST00000474557 IGHA1P01876 353 aa9.19□□□□□ -0.94
HMGN1P10-201ENST00000474557 PAXIP1Q6ZW49 1069 aaPredicted RBP9.19□□□□□ -0.94
HMGN1P10-201ENST00000474557 MRPL14Q6P1L8 145 aaKnown RBP9.18□□□□□ -0.94
HMGN1P10-201ENST00000474557 PLEKHG3A1L390 1219 aa9.16□□□□□ -0.94
HMGN1P10-201ENST00000474557 GNPATO15228 680 aa9.16□□□□□ -0.94
HMGN1P10-201ENST00000474557 MAN1A2O60476 641 aa9.14□□□□□ -0.95
HMGN1P10-201ENST00000474557 GPAT2Q6NUI2 795 aa9.14□□□□□ -0.95
HMGN1P10-201ENST00000474557 PURBQ96QR8 312 aaKnown RBP9.14□□□□□ -0.95
HMGN1P10-201ENST00000474557 USP46P62068 366 aa9.13□□□□□ -0.95
HMGN1P10-201ENST00000474557 FOXK2Q01167 660 aa9.13□□□□□ -0.95
HMGN1P10-201ENST00000474557 KCNV2Q8TDN2 545 aa9.13□□□□□ -0.95
HMGN1P10-201ENST00000474557 ADAMTS8Q9UP79 889 aa9.13□□□□□ -0.95
HMGN1P10-201ENST00000474557 DNMT3AQ9Y6K1 912 aaPredicted RBP9.13□□□□□ -0.95
HMGN1P10-201ENST00000474557 KDM4AO75164 1064 aa9.12□□□□□ -0.95
HMGN1P10-201ENST00000474557 JUNDP17535 347 aa9.12□□□□□ -0.95
HMGN1P10-201ENST00000474557 NLRP7Q8WX94 980 aa9.12□□□□□ -0.95
HMGN1P10-201ENST00000474557 NUDT12Q9BQG2 462 aa9.11□□□□□ -0.95
HMGN1P10-201ENST00000474557 NNTQ13423 1086 aa9.1□□□□□ -0.95
HMGN1P10-201ENST00000474557 SOBPA7XYQ1 873 aa9.09□□□□□ -0.95
HMGN1P10-201ENST00000474557 ADH1CP00326 375 aa9.09□□□□□ -0.95
HMGN1P10-201ENST00000474557 PPFIA3O75145 1194 aa9.08□□□□□ -0.96
HMGN1P10-201ENST00000474557 SH3BP2P78314 561 aa9.08□□□□□ -0.96
HMGN1P10-201ENST00000474557 SMYD5Q6GMV2 418 aa9.08□□□□□ -0.96
HMGN1P10-201ENST00000474557 WDR4P57081 412 aaKnown RBP9.07□□□□□ -0.96
HMGN1P10-201ENST00000474557 XP32Q5T750 250 aa9.07□□□□□ -0.96
HMGN1P10-201ENST00000474557 KANK3Q6NY19 840 aa9.07□□□□□ -0.96
HMGN1P10-201ENST00000474557 P3H3Q8IVL6 736 aa9.07□□□□□ -0.96
HMGN1P10-201ENST00000474557 UPP2O95045 317 aa9.06□□□□□ -0.96
HMGN1P10-201ENST00000474557 CD46P15529 392 aa9.06□□□□□ -0.96
HMGN1P10-201ENST00000474557 VARSP26640 1264 aaKnown RBP9.06□□□□□ -0.96
HMGN1P10-201ENST00000474557 MPNDQ8N594 471 aa9.06□□□□□ -0.96
HMGN1P10-201ENST00000474557 TLL2Q9Y6L7 1015 aa9.05□□□□□ -0.96
HMGN1P10-201ENST00000474557 SEMA3EO15041 775 aa9.04□□□□□ -0.96
HMGN1P10-201ENST00000474557 TIMP2P16035 220 aa9.04□□□□□ -0.96
HMGN1P10-201ENST00000474557 IRS1P35568 1242 aa9.04□□□□□ -0.96
HMGN1P10-201ENST00000474557 PTCRAQ6ISU1 281 aaPredicted RBP9.04□□□□□ -0.96
HMGN1P10-201ENST00000474557 SVOPQ8N4V2 548 aa9.04□□□□□ -0.96
HMGN1P10-201ENST00000474557 CNTNAP3BQ96NU0 1288 aa9.04□□□□□ -0.96
HMGN1P10-201ENST00000474557 CNTNAP3Q9BZ76 1288 aa9.04□□□□□ -0.96
HMGN1P10-201ENST00000474557 MARSP56192 900 aaKnown RBP9.03□□□□□ -0.96
HMGN1P10-201ENST00000474557 CCNYL3P0C7X3 344 aa9.02□□□□□ -0.97
HMGN1P10-201ENST00000474557 RETREG3Q86VR2 466 aa9.02□□□□□ -0.97
HMGN1P10-201ENST00000474557 PHOX2BQ99453 314 aa9.02□□□□□ -0.97
HMGN1P10-201ENST00000474557 RBM26Q5T8P6 1007 aaKnown RBP9.01□□□□□ -0.97
HMGN1P10-201ENST00000474557 HOXA2O43364 376 aa9□□□□□ -0.97
HMGN1P10-201ENST00000474557 C6orf118Q5T5N4 469 aa9□□□□□ -0.97
HMGN1P10-201ENST00000474557 SCARF2Q96GP6 870 aaPredicted RBP9□□□□□ -0.97
HMGN1P10-201ENST00000474557 MS4A1P11836 297 aa8.99□□□□□ -0.97
HMGN1P10-201ENST00000474557 BMP2P12643 396 aa8.99□□□□□ -0.97
HMGN1P10-201ENST00000474557 UNC93B1Q9H1C4 597 aa8.99□□□□□ -0.97
HMGN1P10-201ENST00000474557 LINC01559Q495D7 138 aa8.98□□□□□ -0.97
HMGN1P10-201ENST00000474557 BAP1Q92560 729 aa8.98□□□□□ -0.97
HMGN1P10-201ENST00000474557 HLA-CQ95604 372 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms