RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 KIF1BO60333 1816 aa14.7□□□□□ -0.06
MCF2L-223ENST00000473345 PLEKHH1Q9ULM0 1364 aa14.69□□□□□ -0.06
MCF2L-223ENST00000473345 ADGRF5Q8IZF2 1346 aa14.68□□□□□ -0.06
MCF2L-223ENST00000473345 PPLO60437 1756 aa14.68□□□□□ -0.06
MCF2L-223ENST00000473345 CDC42BPGQ6DT37 1551 aa14.66□□□□□ -0.06
MCF2L-223ENST00000473345 NUTM2FA1L443 756 aa14.66□□□□□ -0.06
MCF2L-223ENST00000473345 VGFO15240 615 aaPredicted RBP14.66□□□□□ -0.06
MCF2L-223ENST00000473345 WAPLQ7Z5K2 1190 aa14.66□□□□□ -0.06
MCF2L-223ENST00000473345 HFM1A2PYH4 1435 aa14.66□□□□□ -0.06
MCF2L-223ENST00000473345 SRCAPQ6ZRS2 3230 aa14.65□□□□□ -0.06
MCF2L-223ENST00000473345 FOXO3O43524 673 aa14.65□□□□□ -0.06
MCF2L-223ENST00000473345 TRPC5Q9UL62 973 aaPredicted RBP14.65□□□□□ -0.06
MCF2L-223ENST00000473345 ATAD2Q6PL18 1390 aa14.64□□□□□ -0.07
MCF2L-223ENST00000473345 ESCO1Q5FWF5 840 aa14.64□□□□□ -0.07
MCF2L-223ENST00000473345 TMEM132EQ6IEE7 984 aa14.63□□□□□ -0.07
MCF2L-223ENST00000473345 SPATA31E1Q6ZUB1 1445 aa14.63□□□□□ -0.07
MCF2L-223ENST00000473345 GLI3P10071 1580 aa14.63□□□□□ -0.07
MCF2L-223ENST00000473345 RPGRIP1LQ68CZ1 1315 aa14.63□□□□□ -0.07
MCF2L-223ENST00000473345 TECPR2O15040 1411 aa14.62□□□□□ -0.07
MCF2L-223ENST00000473345 SLC4A1APQ9BWU0 796 aaKnown RBP14.62□□□□□ -0.07
MCF2L-223ENST00000473345 STK26Q9P289 416 aa14.62□□□□□ -0.07
MCF2L-223ENST00000473345 NPHP3Q7Z494 1330 aa14.61□□□□□ -0.07
MCF2L-223ENST00000473345 EP400Q96L91 3159 aa14.61□□□□□ -0.07
MCF2L-223ENST00000473345 MARF1Q9Y4F3 1742 aaKnown RBP14.61□□□□□ -0.07
MCF2L-223ENST00000473345 SLIT2O94813 1529 aa14.6□□□□□ -0.07
MCF2L-223ENST00000473345 LRPPRCP42704 1394 aaKnown RBP14.6□□□□□ -0.07
MCF2L-223ENST00000473345 RALGAPBQ86X10 1494 aa14.59□□□□□ -0.07
MCF2L-223ENST00000473345 IFT172Q9UG01 1749 aa14.59□□□□□ -0.07
MCF2L-223ENST00000473345 GJD4Q96KN9 370 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-223ENST00000473345 RGL3Q3MIN7 710 aa14.58□□□□□ -0.08
MCF2L-223ENST00000473345 ABCC11Q96J66 1382 aa14.58□□□□□ -0.08
MCF2L-223ENST00000473345 FMN2Q9NZ56 1722 aa14.58□□□□□ -0.08
MCF2L-223ENST00000473345 PIK3C2GO75747 1445 aa14.58□□□□□ -0.08
MCF2L-223ENST00000473345 SPATA31A3Q5VYP0 1347 aa14.57□□□□□ -0.08
MCF2L-223ENST00000473345 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.56□□□□□ -0.08
MCF2L-223ENST00000473345 CABLES1Q8TDN4 633 aa14.56□□□□□ -0.08
MCF2L-223ENST00000473345 KNDC1Q76NI1 1749 aa14.55□□□□□ -0.08
MCF2L-223ENST00000473345 DEFB132Q7Z7B7 95 aa14.55□□□□□ -0.08
MCF2L-223ENST00000473345 USP32Q8NFA0 1604 aa14.55□□□□□ -0.08
MCF2L-223ENST00000473345 UNC5CLQ8IV45 518 aa14.54□□□□□ -0.08
MCF2L-223ENST00000473345 YTHDC2Q9H6S0 1430 aaKnown RBP14.54□□□□□ -0.08
MCF2L-223ENST00000473345 BRWD3Q6RI45 1802 aa14.54□□□□□ -0.08
MCF2L-223ENST00000473345 RGPD8O14715 1765 aaPredicted RBP14.52□□□□□ -0.08
MCF2L-223ENST00000473345 CCDC144AA2RUR9 1427 aa14.52□□□□□ -0.08
MCF2L-223ENST00000473345 PLEKHG5O94827 1062 aa14.52□□□□□ -0.09
MCF2L-223ENST00000473345 KRT28Q7Z3Y7 464 aa14.52□□□□□ -0.09
MCF2L-223ENST00000473345 ZRANB1Q9UGI0 708 aa14.52□□□□□ -0.09
MCF2L-223ENST00000473345 MPHOSPH9Q99550 1183 aa14.51□□□□□ -0.09
MCF2L-223ENST00000473345 ABCA3Q99758 1704 aa14.51□□□□□ -0.09
MCF2L-223ENST00000473345 NRXN1Q9ULB1 1477 aa14.5□□□□□ -0.09
MCF2L-223ENST00000473345 TNS3Q68CZ2 1445 aa14.5□□□□□ -0.09
MCF2L-223ENST00000473345 ANKRD30BQ9BXX2 1392 aa14.5□□□□□ -0.09
MCF2L-223ENST00000473345 CFAP70Q5T0N1 1121 aa14.5□□□□□ -0.09
MCF2L-223ENST00000473345 SEPT12Q8IYM1 358 aa14.5□□□□□ -0.09
MCF2L-223ENST00000473345 BLMP54132 1417 aaPredicted RBP14.49□□□□□ -0.09
MCF2L-223ENST00000473345 KIF1AQ12756 1690 aa14.49□□□□□ -0.09
MCF2L-223ENST00000473345 C14orf93Q9H972 538 aaKnown RBP14.49□□□□□ -0.09
MCF2L-223ENST00000473345 PLCH1Q4KWH8 1693 aa14.49□□□□□ -0.09
MCF2L-223ENST00000473345 SAFB2Q14151 953 aaKnown RBP eCLIP14.48□□□□□ -0.09
MCF2L-223ENST00000473345 PHF8Q9UPP1 1060 aa14.48□□□□□ -0.09
MCF2L-223ENST00000473345 FAM83GA6ND36 823 aa14.47□□□□□ -0.09
MCF2L-223ENST00000473345 ONECUT3O60422 494 aaPredicted RBP14.47□□□□□ -0.09
MCF2L-223ENST00000473345 VPS72Q15906 364 aa14.47□□□□□ -0.09
MCF2L-223ENST00000473345 CCDC125Q86Z20 511 aa14.47□□□□□ -0.09
MCF2L-223ENST00000473345 PRR36Q9H6K5 1346 aa14.45□□□□□ -0.1
MCF2L-223ENST00000473345 NRAPQ86VF7 1730 aa14.45□□□□□ -0.1
MCF2L-223ENST00000473345 PMFBP1Q8TBY8 1022 aa14.45□□□□□ -0.1
MCF2L-223ENST00000473345 SIRT1Q96EB6 747 aa14.45□□□□□ -0.1
MCF2L-223ENST00000473345 PRAM1Q96QH2 718 aa14.45□□□□□ -0.1
MCF2L-223ENST00000473345 SBNO1A3KN83 1393 aa14.45□□□□□ -0.1
MCF2L-223ENST00000473345 TRPM3Q9HCF6 1732 aaPredicted RBP14.44□□□□□ -0.1
MCF2L-223ENST00000473345 ADGRB1O14514 1584 aa14.44□□□□□ -0.1
MCF2L-223ENST00000473345 FAM182BQ5T319 152 aa14.43□□□□□ -0.1
MCF2L-223ENST00000473345 NWD2Q9ULI1 1742 aa14.43□□□□□ -0.1
MCF2L-223ENST00000473345 PSDA5PKW4 1024 aaPredicted RBP14.41□□□□□ -0.1
MCF2L-223ENST00000473345 LMOD2Q6P5Q4 547 aa14.41□□□□□ -0.1
MCF2L-223ENST00000473345 KRT27Q7Z3Y8 459 aa14.41□□□□□ -0.1
MCF2L-223ENST00000473345 HIRIP3Q9BW71 556 aaPredicted RBP14.41□□□□□ -0.1
MCF2L-223ENST00000473345 DLC1Q96QB1 1528 aa14.41□□□□□ -0.1
MCF2L-223ENST00000473345 ALS2Q96Q42 1657 aa14.4□□□□□ -0.1
MCF2L-223ENST00000473345 ADGRB2O60241 1585 aa14.4□□□□□ -0.1
MCF2L-223ENST00000473345 FAM98CQ17RN3 349 aaKnown RBP14.4□□□□□ -0.1
MCF2L-223ENST00000473345 CRYBG1Q9Y4K1 1723 aa14.4□□□□□ -0.1
MCF2L-223ENST00000473345 DHX57Q6P158 1386 aaKnown RBP14.39□□□□□ -0.11
MCF2L-223ENST00000473345 CCDC9Q9Y3X0 531 aaKnown RBP14.39□□□□□ -0.11
MCF2L-223ENST00000473345 LRP5O75197 1615 aa14.39□□□□□ -0.11
MCF2L-223ENST00000473345 PSME1Q06323 249 aa14.38□□□□□ -0.11
MCF2L-223ENST00000473345 BTG4Q9NY30 223 aa14.38□□□□□ -0.11
MCF2L-223ENST00000473345 ANKARQ7Z5J8 1434 aa14.38□□□□□ -0.11
MCF2L-223ENST00000473345 ARHGEF10O15013 1369 aa14.37□□□□□ -0.11
MCF2L-223ENST00000473345 HAP1P54257 671 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-223ENST00000473345 TRAK1Q9UPV9 953 aa14.37□□□□□ -0.11
MCF2L-223ENST00000473345 THSD7AQ9UPZ6 1657 aa14.36□□□□□ -0.11
MCF2L-223ENST00000473345 HRCP23327 699 aa14.36□□□□□ -0.11
MCF2L-223ENST00000473345 EN1Q05925 392 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-223ENST00000473345 MINK1Q8N4C8 1332 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-223ENST00000473345 ACIN1Q9UKV3 1341 aaKnown RBP14.36□□□□□ -0.11
MCF2L-223ENST00000473345 SPATA31A5Q5VU36 1347 aa14.35□□□□□ -0.11
MCF2L-223ENST00000473345 SPATA31A7Q8IWB4 1347 aa14.35□□□□□ -0.11
MCF2L-223ENST00000473345 POGKQ9P215 609 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms