RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 NSD3Q9BZ95 1437 aa18■□□□□ 0.47
ABCF3-210ENST00000473311 SBNO2Q9Y2G9 1366 aa18■□□□□ 0.47
ABCF3-210ENST00000473311 PDE3AQ14432 1141 aa17.99■□□□□ 0.47
ABCF3-210ENST00000473311 NOS1P29475 1434 aa17.99■□□□□ 0.47
ABCF3-210ENST00000473311 MYO3AQ8NEV4 1616 aa17.99■□□□□ 0.47
ABCF3-210ENST00000473311 COG6Q9Y2V7 657 aa17.99■□□□□ 0.47
ABCF3-210ENST00000473311 PANK1Q8TE04 598 aa17.99■□□□□ 0.47
ABCF3-210ENST00000473311 PPRC1Q5VV67 1664 aaKnown RBP17.98■□□□□ 0.47
ABCF3-210ENST00000473311 FRAT1Q92837 279 aaPredicted RBP17.98■□□□□ 0.47
ABCF3-210ENST00000473311 CLUAP1Q96AJ1 413 aa17.98■□□□□ 0.47
ABCF3-210ENST00000473311 RRP7AQ9Y3A4 280 aaKnown RBP17.98■□□□□ 0.47
ABCF3-210ENST00000473311 SLC12A5Q9H2X9 1139 aa17.97■□□□□ 0.47
ABCF3-210ENST00000473311 NINLQ9Y2I6 1382 aa17.97■□□□□ 0.47
ABCF3-210ENST00000473311 NRXN1Q9ULB1 1477 aa17.97■□□□□ 0.47
ABCF3-210ENST00000473311 CFAP65Q6ZU64 1925 aaKnown RBP17.96■□□□□ 0.47
ABCF3-210ENST00000473311 RUNDC1Q96C34 613 aa17.95■□□□□ 0.46
ABCF3-210ENST00000473311 SHPRHQ149N8 1683 aa17.95■□□□□ 0.46
ABCF3-210ENST00000473311 RRP9O43818 475 aaKnown RBP17.94■□□□□ 0.46
ABCF3-210ENST00000473311 KIDINS220Q9ULH0 1771 aa17.94■□□□□ 0.46
ABCF3-210ENST00000473311 TCP11L2Q8N4U5 519 aa17.94■□□□□ 0.46
ABCF3-210ENST00000473311 SETBP1Q9Y6X0 1596 aa17.94■□□□□ 0.46
ABCF3-210ENST00000473311 ADGRB3O60242 1522 aa17.93■□□□□ 0.46
ABCF3-210ENST00000473311 VIRMAQ69YN4 1812 aaKnown RBP17.93■□□□□ 0.46
ABCF3-210ENST00000473311 TMEM132EQ6IEE7 984 aa17.93■□□□□ 0.46
ABCF3-210ENST00000473311 QRICH2Q9H0J4 1663 aa17.93■□□□□ 0.46
ABCF3-210ENST00000473311 MAPK8IP3Q9UPT6 1336 aa17.92■□□□□ 0.46
ABCF3-210ENST00000473311 RARSP54136 660 aaKnown RBP17.91■□□□□ 0.46
ABCF3-210ENST00000473311 LMTK2Q8IWU2 1503 aa17.91■□□□□ 0.46
ABCF3-210ENST00000473311 MTHFSP49914 203 aa17.9■□□□□ 0.46
ABCF3-210ENST00000473311 C14orf93Q9H972 538 aaKnown RBP17.9■□□□□ 0.46
ABCF3-210ENST00000473311 GGT6Q6P531 493 aa17.9■□□□□ 0.46
ABCF3-210ENST00000473311 ZC3H13Q5T200 1668 aaKnown RBP17.9■□□□□ 0.46
ABCF3-210ENST00000473311 ASXL2Q76L83 1435 aa17.9■□□□□ 0.46
ABCF3-210ENST00000473311 CFAP53Q96M91 514 aa17.9■□□□□ 0.46
ABCF3-210ENST00000473311 BCL2L13Q9BXK5 485 aa17.9■□□□□ 0.46
ABCF3-210ENST00000473311 PPLO60437 1756 aa17.89■□□□□ 0.45
ABCF3-210ENST00000473311 ZNF518AQ6AHZ1 1483 aa17.89■□□□□ 0.45
ABCF3-210ENST00000473311 FRAT2O75474 233 aaPredicted RBP17.88■□□□□ 0.45
ABCF3-210ENST00000473311 NPATQ14207 1427 aa17.88■□□□□ 0.45
ABCF3-210ENST00000473311 IQSEC2Q5JU85 1478 aa17.88■□□□□ 0.45
ABCF3-210ENST00000473311 HSP90AA2PQ14568 343 aaPredicted RBP17.88■□□□□ 0.45
ABCF3-210ENST00000473311 WDR63Q8IWG1 891 aa17.88■□□□□ 0.45
ABCF3-210ENST00000473311 PMFBP1Q8TBY8 1022 aa17.88■□□□□ 0.45
ABCF3-210ENST00000473311 USP19O94966 1318 aa17.88■□□□□ 0.45
ABCF3-210ENST00000473311 SEC24BO95487 1268 aa17.87■□□□□ 0.45
ABCF3-210ENST00000473311 TNNQ9UQP3 1299 aa17.87■□□□□ 0.45
ABCF3-210ENST00000473311 ADGRB1O14514 1584 aa17.87■□□□□ 0.45
ABCF3-210ENST00000473311 RLBP1P12271 317 aa17.86■□□□□ 0.45
ABCF3-210ENST00000473311 PHF23Q9BUL5 403 aaPredicted RBP17.86■□□□□ 0.45
ABCF3-210ENST00000473311 PCDHB15Q9Y5E8 787 aa17.85■□□□□ 0.45
ABCF3-210ENST00000473311 NUTM2DQ5VT03 806 aaPredicted RBP17.84■□□□□ 0.45
ABCF3-210ENST00000473311 U2AF1L5P0DN76 240 aaPredicted RBP17.84■□□□□ 0.45
ABCF3-210ENST00000473311 U2AF1Q01081 240 aaKnown RBP eCLIP17.84■□□□□ 0.45
ABCF3-210ENST00000473311 AAMPQ13685 434 aa17.84■□□□□ 0.45
ABCF3-210ENST00000473311 USP32Q8NFA0 1604 aa17.83■□□□□ 0.45
ABCF3-210ENST00000473311 CCDC27Q2M243 656 aa17.83■□□□□ 0.44
ABCF3-210ENST00000473311 MYH16Q9H6N6 1097 aa17.83■□□□□ 0.44
ABCF3-210ENST00000473311 RPGRIP1LQ68CZ1 1315 aa17.82■□□□□ 0.44
ABCF3-210ENST00000473311 EVC2Q86UK5 1308 aa17.82■□□□□ 0.44
ABCF3-210ENST00000473311 BECN1Q14457 450 aa17.82■□□□□ 0.44
ABCF3-210ENST00000473311 PDZRN3Q9UPQ7 1066 aa17.81■□□□□ 0.44
ABCF3-210ENST00000473311 GLI2P10070 1586 aa17.81■□□□□ 0.44
ABCF3-210ENST00000473311 ANKRD36BQ8N2N9 1353 aa17.8■□□□□ 0.44
ABCF3-210ENST00000473311 UPF2Q9HAU5 1272 aaKnown RBP17.8■□□□□ 0.44
ABCF3-210ENST00000473311 SAFB2Q14151 953 aaKnown RBP eCLIP17.8■□□□□ 0.44
ABCF3-210ENST00000473311 RWDD1Q9H446 243 aaPredicted RBP17.8■□□□□ 0.44
ABCF3-210ENST00000473311 CABP2Q9NPB3 220 aa17.8■□□□□ 0.44
ABCF3-210ENST00000473311 FRMPD1Q5SYB0 1578 aa17.79■□□□□ 0.44
ABCF3-210ENST00000473311 HSP90AA1P07900 732 aaKnown RBP17.79■□□□□ 0.44
ABCF3-210ENST00000473311 TULP4Q9NRJ4 1543 aa17.78■□□□□ 0.44
ABCF3-210ENST00000473311 SLKQ9H2G2 1235 aaPredicted RBP17.78■□□□□ 0.44
ABCF3-210ENST00000473311 NSD2O96028 1365 aa17.78■□□□□ 0.44
ABCF3-210ENST00000473311 NLRP1Q9C000 1473 aa17.78■□□□□ 0.44
ABCF3-210ENST00000473311 FTSJ3Q8IY81 847 aaKnown RBP17.78■□□□□ 0.44
ABCF3-210ENST00000473311 POGZQ7Z3K3 1410 aa17.78■□□□□ 0.44
ABCF3-210ENST00000473311 HECW2Q9P2P5 1572 aa17.77■□□□□ 0.44
ABCF3-210ENST00000473311 NPM1P06748 294 aaKnown RBP eCLIP17.77■□□□□ 0.44
ABCF3-210ENST00000473311 ARHGEF28Q8N1W1 1705 aaKnown RBP17.77■□□□□ 0.44
ABCF3-210ENST00000473311 VGFO15240 615 aaPredicted RBP17.77■□□□□ 0.44
ABCF3-210ENST00000473311 MVPQ14764 893 aaKnown RBP17.76■□□□□ 0.43
ABCF3-210ENST00000473311 ZKSCAN2Q63HK3 967 aa17.76■□□□□ 0.43
ABCF3-210ENST00000473311 TSR2Q969E8 191 aaKnown RBP17.76■□□□□ 0.43
ABCF3-210ENST00000473311 SENP3Q9H4L4 574 aaPredicted RBP17.76■□□□□ 0.43
ABCF3-210ENST00000473311 ABCC3O15438 1527 aa17.76■□□□□ 0.43
ABCF3-210ENST00000473311 U2SURPO15042 1029 aaKnown RBP17.76■□□□□ 0.43
ABCF3-210ENST00000473311 PUS7Q96PZ0 661 aaKnown RBP17.76■□□□□ 0.43
ABCF3-210ENST00000473311 CD109Q6YHK3 1445 aa17.76■□□□□ 0.43
ABCF3-210ENST00000473311 MLH3Q9UHC1 1453 aa17.75■□□□□ 0.43
ABCF3-210ENST00000473311 DZIP1LQ8IYY4 767 aaKnown RBP17.75■□□□□ 0.43
ABCF3-210ENST00000473311 NCBP3Q53F19 620 aaKnown RBP17.74■□□□□ 0.43
ABCF3-210ENST00000473311 ADGRB2O60241 1585 aa17.74■□□□□ 0.43
ABCF3-210ENST00000473311 CAMSAP1Q5T5Y3 1602 aa17.74■□□□□ 0.43
ABCF3-210ENST00000473311 SMC4Q9NTJ3 1288 aa17.74■□□□□ 0.43
ABCF3-210ENST00000473311 ZMYM3Q14202 1370 aa17.74■□□□□ 0.43
ABCF3-210ENST00000473311 CFAP74Q9C0B2 1584 aa17.73■□□□□ 0.43
ABCF3-210ENST00000473311 SRPK2P78362 688 aaKnown RBP17.73■□□□□ 0.43
ABCF3-210ENST00000473311 TBC1D32Q96NH3 1257 aa17.73■□□□□ 0.43
ABCF3-210ENST00000473311 GGNBP2Q9H3C7 697 aa17.73■□□□□ 0.43
ABCF3-210ENST00000473311 STK26Q9P289 416 aa17.73■□□□□ 0.43
ABCF3-210ENST00000473311 SIGLEC1Q9BZZ2 1709 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms