RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 PPLO60437 1756 aa28.91■■■□□ 2.22
APTX-218ENST00000473270 STK26Q9P289 416 aa28.91■■■□□ 2.22
APTX-218ENST00000473270 PRAG1Q86YV5 1406 aa28.91■■■□□ 2.22
APTX-218ENST00000473270 MPHOSPH9Q99550 1183 aa28.89■■■□□ 2.22
APTX-218ENST00000473270 LRPPRCP42704 1394 aaKnown RBP28.88■■■□□ 2.21
APTX-218ENST00000473270 USP21Q9UK80 565 aa28.87■■■□□ 2.21
APTX-218ENST00000473270 ADGRF5Q8IZF2 1346 aa28.86■■■□□ 2.21
APTX-218ENST00000473270 TRPC5Q9UL62 973 aaPredicted RBP28.84■■■□□ 2.21
APTX-218ENST00000473270 LAMC1P11047 1609 aa28.83■■■□□ 2.21
APTX-218ENST00000473270 CDC42BPGQ6DT37 1551 aa28.81■■■□□ 2.2
APTX-218ENST00000473270 FOXO3O43524 673 aa28.81■■■□□ 2.2
APTX-218ENST00000473270 NUTM2FA1L443 756 aa28.8■■■□□ 2.2
APTX-218ENST00000473270 WAPLQ7Z5K2 1190 aa28.8■■■□□ 2.2
APTX-218ENST00000473270 RGS12O14924 1447 aa28.78■■■□□ 2.2
APTX-218ENST00000473270 TMEM132EQ6IEE7 984 aa28.78■■■□□ 2.2
APTX-218ENST00000473270 SPATA31E1Q6ZUB1 1445 aa28.77■■■□□ 2.2
APTX-218ENST00000473270 ABCC11Q96J66 1382 aa28.76■■■□□ 2.2
APTX-218ENST00000473270 XPCQ01831 940 aaPredicted RBP28.76■■■□□ 2.19
APTX-218ENST00000473270 FNBP4Q8N3X1 1017 aaPredicted RBP28.75■■■□□ 2.19
APTX-218ENST00000473270 TECPR2O15040 1411 aa28.75■■■□□ 2.19
APTX-218ENST00000473270 ATAD2Q6PL18 1390 aa28.75■■■□□ 2.19
APTX-218ENST00000473270 HAP1P54257 671 aaPredicted RBP28.72■■■□□ 2.19
APTX-218ENST00000473270 TRIM26Q12899 539 aaPredicted RBP28.72■■■□□ 2.19
APTX-218ENST00000473270 PIK3C2GO75747 1445 aa28.71■■■□□ 2.19
APTX-218ENST00000473270 DHX57Q6P158 1386 aaKnown RBP28.71■■■□□ 2.19
APTX-218ENST00000473270 YTHDC2Q9H6S0 1430 aaKnown RBP28.7■■■□□ 2.19
APTX-218ENST00000473270 COL22A1Q8NFW1 1626 aaPredicted RBP28.7■■■□□ 2.19
APTX-218ENST00000473270 PXDNQ92626 1479 aa28.68■■■□□ 2.18
APTX-218ENST00000473270 PSME1Q06323 249 aa28.68■■■□□ 2.18
APTX-218ENST00000473270 SIRT1Q96EB6 747 aa28.68■■■□□ 2.18
APTX-218ENST00000473270 MYOM2P54296 1465 aa28.66■■■□□ 2.18
APTX-218ENST00000473270 IFT172Q9UG01 1749 aa28.66■■■□□ 2.18
APTX-218ENST00000473270 C14orf93Q9H972 538 aaKnown RBP28.66■■■□□ 2.18
APTX-218ENST00000473270 PLEKHH1Q9ULM0 1364 aa28.65■■■□□ 2.18
APTX-218ENST00000473270 KRT28Q7Z3Y7 464 aa28.65■■■□□ 2.18
APTX-218ENST00000473270 KNDC1Q76NI1 1749 aa28.65■■■□□ 2.18
APTX-218ENST00000473270 ATRNO75882 1429 aa28.64■■■□□ 2.18
APTX-218ENST00000473270 POGKQ9P215 609 aa28.64■■■□□ 2.18
APTX-218ENST00000473270 PHF8Q9UPP1 1060 aa28.62■■■□□ 2.17
APTX-218ENST00000473270 KIF1AQ12756 1690 aa28.61■■■□□ 2.17
APTX-218ENST00000473270 CFAP70Q5T0N1 1121 aa28.61■■■□□ 2.17
APTX-218ENST00000473270 LMOD2Q6P5Q4 547 aa28.61■■■□□ 2.17
APTX-218ENST00000473270 SPATA31A3Q5VYP0 1347 aa28.61■■■□□ 2.17
APTX-218ENST00000473270 SAFB2Q14151 953 aaKnown RBP eCLIP28.6■■■□□ 2.17
APTX-218ENST00000473270 GJD4Q96KN9 370 aaPredicted RBP28.6■■■□□ 2.17
APTX-218ENST00000473270 PRAM1Q96QH2 718 aa28.59■■■□□ 2.17
APTX-218ENST00000473270 FMN2Q9NZ56 1722 aa28.58■■■□□ 2.17
APTX-218ENST00000473270 CCDC125Q86Z20 511 aa28.58■■■□□ 2.17
APTX-218ENST00000473270 UNC5CLQ8IV45 518 aa28.58■■■□□ 2.17
APTX-218ENST00000473270 BCL9LQ86UU0 1499 aa28.57■■■□□ 2.16
APTX-218ENST00000473270 PLEKHG5O94827 1062 aa28.55■■■□□ 2.16
APTX-218ENST00000473270 MARF1Q9Y4F3 1742 aaKnown RBP28.55■■■□□ 2.16
APTX-218ENST00000473270 ZRANB1Q9UGI0 708 aa28.53■■■□□ 2.16
APTX-218ENST00000473270 CCDC9Q9Y3X0 531 aaKnown RBP28.52■■■□□ 2.16
APTX-218ENST00000473270 NRXN1Q9ULB1 1477 aa28.52■■■□□ 2.16
APTX-218ENST00000473270 TNS3Q68CZ2 1445 aa28.52■■■□□ 2.16
APTX-218ENST00000473270 ARHGEF10O15013 1369 aa28.51■■■□□ 2.16
APTX-218ENST00000473270 RAB3GAP2Q9H2M9 1393 aa28.51■■■□□ 2.16
APTX-218ENST00000473270 KDM2AQ9Y2K7 1162 aa28.49■■■□□ 2.15
APTX-218ENST00000473270 EIF3AQ14152 1382 aaKnown RBP28.49■■■□□ 2.15
APTX-218ENST00000473270 TRAK1Q9UPV9 953 aa28.48■■■□□ 2.15
APTX-218ENST00000473270 SBNO1A3KN83 1393 aa28.48■■■□□ 2.15
APTX-218ENST00000473270 SF3B2Q13435 895 aaKnown RBP28.47■■■□□ 2.15
APTX-218ENST00000473270 PMFBP1Q8TBY8 1022 aa28.47■■■□□ 2.15
APTX-218ENST00000473270 STAC3Q96MF2 364 aa28.47■■■□□ 2.15
APTX-218ENST00000473270 DCAF11Q8TEB1 546 aa28.46■■■□□ 2.15
APTX-218ENST00000473270 GPRASP1Q5JY77 1395 aa28.46■■■□□ 2.15
APTX-218ENST00000473270 ANKARQ7Z5J8 1434 aa28.45■■■□□ 2.15
APTX-218ENST00000473270 SLIT2O94813 1529 aa28.45■■■□□ 2.15
APTX-218ENST00000473270 CABLES1Q8TDN4 633 aa28.45■■■□□ 2.14
APTX-218ENST00000473270 DLC1Q96QB1 1528 aa28.44■■■□□ 2.14
APTX-218ENST00000473270 USP32Q8NFA0 1604 aa28.44■■■□□ 2.14
APTX-218ENST00000473270 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.44■■■□□ 2.14
APTX-218ENST00000473270 RALGAPBQ86X10 1494 aa28.44■■■□□ 2.14
APTX-218ENST00000473270 HIRIP3Q9BW71 556 aaPredicted RBP28.43■■■□□ 2.14
APTX-218ENST00000473270 A0A0G2JS52 829 aa28.42■■■□□ 2.14
APTX-218ENST00000473270 MYT1Q01538 1121 aa28.42■■■□□ 2.14
APTX-218ENST00000473270 VPS72Q15906 364 aa28.41■■■□□ 2.14
APTX-218ENST00000473270 MINK1Q8N4C8 1332 aaPredicted RBP28.41■■■□□ 2.14
APTX-218ENST00000473270 RGPD8O14715 1765 aaPredicted RBP28.4■■■□□ 2.14
APTX-218ENST00000473270 SEPT12Q8IYM1 358 aa28.38■■■□□ 2.13
APTX-218ENST00000473270 NGDNQ8NEJ9 315 aaKnown RBP28.38■■■□□ 2.13
APTX-218ENST00000473270 HRCP23327 699 aa28.37■■■□□ 2.13
APTX-218ENST00000473270 PAK3O75914 559 aaPredicted RBP28.36■■■□□ 2.13
APTX-218ENST00000473270 PCGF6Q9BYE7 350 aa28.36■■■□□ 2.13
APTX-218ENST00000473270 BLMP54132 1417 aaPredicted RBP28.35■■■□□ 2.13
APTX-218ENST00000473270 WASLO00401 505 aaPredicted RBP28.35■■■□□ 2.13
APTX-218ENST00000473270 ADGRB2O60241 1585 aa28.33■■■□□ 2.13
APTX-218ENST00000473270 GLI3P10071 1580 aa28.33■■■□□ 2.13
APTX-218ENST00000473270 EP400Q96L91 3159 aa28.33■■■□□ 2.13
APTX-218ENST00000473270 FAM83GA6ND36 823 aa28.32■■■□□ 2.12
APTX-218ENST00000473270 KRT27Q7Z3Y8 459 aa28.32■■■□□ 2.12
APTX-218ENST00000473270 ADGRB1O14514 1584 aa28.31■■■□□ 2.12
APTX-218ENST00000473270 NWD2Q9ULI1 1742 aa28.31■■■□□ 2.12
APTX-218ENST00000473270 BTG4Q9NY30 223 aa28.3■■■□□ 2.12
APTX-218ENST00000473270 TULP4Q9NRJ4 1543 aa28.29■■■□□ 2.12
APTX-218ENST00000473270 PLCH1Q4KWH8 1693 aa28.29■■■□□ 2.12
APTX-218ENST00000473270 ONECUT3O60422 494 aaPredicted RBP28.26■■■□□ 2.11
APTX-218ENST00000473270 FAM98CQ17RN3 349 aaKnown RBP28.25■■■□□ 2.11
APTX-218ENST00000473270 PRDM11Q9NQV5 511 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms