RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 PLEKHH1Q9ULM0 1364 aa23.55■■□□□ 1.36
CCM2-205ENST00000472223 RBM33Q96EV2 1170 aaKnown RBP23.55■■□□□ 1.36
CCM2-205ENST00000472223 EVC2Q86UK5 1308 aa23.55■■□□□ 1.36
CCM2-205ENST00000472223 CDCA8Q53HL2 280 aa23.54■■□□□ 1.36
CCM2-205ENST00000472223 HIRIP3Q9BW71 556 aaPredicted RBP23.53■■□□□ 1.36
CCM2-205ENST00000472223 C19orf44Q9H6X5 657 aa23.53■■□□□ 1.36
CCM2-205ENST00000472223 LRRC7Q96NW7 1537 aa23.53■■□□□ 1.36
CCM2-205ENST00000472223 MSH6P52701 1360 aa23.52■■□□□ 1.36
CCM2-205ENST00000472223 SBNO2Q9Y2G9 1366 aa23.52■■□□□ 1.36
CCM2-205ENST00000472223 ATF3P18847 181 aa23.51■■□□□ 1.35
CCM2-205ENST00000472223 LTBP4Q8N2S1 1624 aa23.49■■□□□ 1.35
CCM2-205ENST00000472223 SRPK2P78362 688 aaKnown RBP23.49■■□□□ 1.35
CCM2-205ENST00000472223 ADGRL3Q9HAR2 1447 aa23.49■■□□□ 1.35
CCM2-205ENST00000472223 TESK2Q96S53 571 aa23.48■■□□□ 1.35
CCM2-205ENST00000472223 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.47■■□□□ 1.35
CCM2-205ENST00000472223 WASLO00401 505 aaPredicted RBP23.47■■□□□ 1.35
CCM2-205ENST00000472223 CADPS2Q86UW7 1296 aa23.47■■□□□ 1.35
CCM2-205ENST00000472223 CDK19Q9BWU1 502 aa23.47■■□□□ 1.35
CCM2-205ENST00000472223 NALCNQ8IZF0 1738 aa23.45■■□□□ 1.34
CCM2-205ENST00000472223 POLR3GLQ9BT43 218 aa23.44■■□□□ 1.34
CCM2-205ENST00000472223 ADGRB2O60241 1585 aa23.44■■□□□ 1.34
CCM2-205ENST00000472223 XIRP1Q702N8 1843 aaKnown RBP23.43■■□□□ 1.34
CCM2-205ENST00000472223 DCCP43146 1447 aa23.42■■□□□ 1.34
CCM2-205ENST00000472223 PUS7Q96PZ0 661 aaKnown RBP23.42■■□□□ 1.34
CCM2-205ENST00000472223 CDC42BPGQ6DT37 1551 aa23.41■■□□□ 1.34
CCM2-205ENST00000472223 ZNF316A6NFI3 1004 aaPredicted RBP23.4■■□□□ 1.34
CCM2-205ENST00000472223 CERKQ8TCT0 537 aa23.4■■□□□ 1.34
CCM2-205ENST00000472223 CABP2Q9NPB3 220 aa23.4■■□□□ 1.34
CCM2-205ENST00000472223 NUTM2FA1L443 756 aa23.38■■□□□ 1.33
CCM2-205ENST00000472223 ATAD2Q6PL18 1390 aa23.38■■□□□ 1.33
CCM2-205ENST00000472223 DISP3Q9P2K9 1392 aa23.38■■□□□ 1.33
CCM2-205ENST00000472223 IQSEC2Q5JU85 1478 aa23.37■■□□□ 1.33
CCM2-205ENST00000472223 TOM1O60784 492 aa23.37■■□□□ 1.33
CCM2-205ENST00000472223 NUDT16Q96DE0 195 aaKnown RBP23.37■■□□□ 1.33
CCM2-205ENST00000472223 TULP4Q9NRJ4 1543 aa23.37■■□□□ 1.33
CCM2-205ENST00000472223 FMN2Q9NZ56 1722 aa23.36■■□□□ 1.33
CCM2-205ENST00000472223 TMC1Q8TDI8 760 aa23.35■■□□□ 1.33
CCM2-205ENST00000472223 CCDC61Q9Y6R9 512 aa23.35■■□□□ 1.33
CCM2-205ENST00000472223 ANKARQ7Z5J8 1434 aa23.34■■□□□ 1.33
CCM2-205ENST00000472223 SLAIN2Q9P270 581 aa23.33■■□□□ 1.33
CCM2-205ENST00000472223 ESCO1Q5FWF5 840 aa23.32■■□□□ 1.32
CCM2-205ENST00000472223 KIF7Q2M1P5 1343 aa23.32■■□□□ 1.32
CCM2-205ENST00000472223 ITSN1Q15811 1721 aa23.31■■□□□ 1.32
CCM2-205ENST00000472223 CCDC7Q96M83 1385 aa23.3■■□□□ 1.32
CCM2-205ENST00000472223 NINLQ9Y2I6 1382 aa23.3■■□□□ 1.32
CCM2-205ENST00000472223 C11orf95C9JLR9 678 aaPredicted RBP23.3■■□□□ 1.32
CCM2-205ENST00000472223 UBAP1LF5GYI3 381 aa23.29■■□□□ 1.32
CCM2-205ENST00000472223 MST1RQ04912 1400 aa23.28■■□□□ 1.32
CCM2-205ENST00000472223 C1orf167Q5SNV9 1468 aa23.28■■□□□ 1.32
CCM2-205ENST00000472223 WASHC2AQ641Q2 1341 aa23.28■■□□□ 1.32
CCM2-205ENST00000472223 PPIP5K1Q6PFW1 1433 aa23.27■■□□□ 1.32
CCM2-205ENST00000472223 NGDNQ8NEJ9 315 aaKnown RBP23.27■■□□□ 1.32
CCM2-205ENST00000472223 TERF2IPQ9NYB0 399 aa23.27■■□□□ 1.32
CCM2-205ENST00000472223 CABP1Q9NZU7 370 aa23.27■■□□□ 1.32
CCM2-205ENST00000472223 PHF8Q9UPP1 1060 aa23.27■■□□□ 1.32
CCM2-205ENST00000472223 RGPD8O14715 1765 aaPredicted RBP23.27■■□□□ 1.32
CCM2-205ENST00000472223 ATP7BP35670 1465 aa23.26■■□□□ 1.31
CCM2-205ENST00000472223 HDGFL2Q7Z4V5 671 aaPredicted RBP23.26■■□□□ 1.31
CCM2-205ENST00000472223 PRR36Q9H6K5 1346 aa23.26■■□□□ 1.31
CCM2-205ENST00000472223 SCAF1Q9H7N4 1312 aaKnown RBP23.25■■□□□ 1.31
CCM2-205ENST00000472223 PLEKHG3A1L390 1219 aa23.24■■□□□ 1.31
CCM2-205ENST00000472223 PMFBP1Q8TBY8 1022 aa23.24■■□□□ 1.31
CCM2-205ENST00000472223 SLC12A5Q9H2X9 1139 aa23.24■■□□□ 1.31
CCM2-205ENST00000472223 ORAI2Q96SN7 254 aa23.23■■□□□ 1.31
CCM2-205ENST00000472223 ZNF692Q9BU19 519 aaPredicted RBP23.23■■□□□ 1.31
CCM2-205ENST00000472223 USP32Q8NFA0 1604 aa23.22■■□□□ 1.31
CCM2-205ENST00000472223 PIP4K2BP78356 416 aa23.22■■□□□ 1.31
CCM2-205ENST00000472223 PSME1Q06323 249 aa23.21■■□□□ 1.31
CCM2-205ENST00000472223 KIF1AQ12756 1690 aa23.21■■□□□ 1.31
CCM2-205ENST00000472223 TOPAZ1Q8N9V7 1692 aa23.2■■□□□ 1.3
CCM2-205ENST00000472223 ACEP12821 1306 aa23.19■■□□□ 1.3
CCM2-205ENST00000472223 BRINP3Q76B58 766 aa23.18■■□□□ 1.3
CCM2-205ENST00000472223 NPHP3Q7Z494 1330 aa23.17■■□□□ 1.3
CCM2-205ENST00000472223 FOXO3O43524 673 aa23.17■■□□□ 1.3
CCM2-205ENST00000472223 ANKRD36BQ8N2N9 1353 aa23.16■■□□□ 1.3
CCM2-205ENST00000472223 DDX10Q13206 875 aaKnown RBP23.16■■□□□ 1.3
CCM2-205ENST00000472223 PANK3Q9H999 370 aa23.16■■□□□ 1.3
CCM2-205ENST00000472223 KTN1Q86UP2 1357 aaKnown RBP23.15■■□□□ 1.3
CCM2-205ENST00000472223 POLR3AO14802 1390 aaPredicted RBP23.14■■□□□ 1.3
CCM2-205ENST00000472223 MYOM1P52179 1685 aa23.14■■□□□ 1.29
CCM2-205ENST00000472223 ROBO1Q9Y6N7 1651 aa23.13■■□□□ 1.29
CCM2-205ENST00000472223 PAK3O75914 559 aaPredicted RBP23.12■■□□□ 1.29
CCM2-205ENST00000472223 KRT28Q7Z3Y7 464 aa23.12■■□□□ 1.29
CCM2-205ENST00000472223 KNSTRNQ9Y448 316 aa23.12■■□□□ 1.29
CCM2-205ENST00000472223 A0A1W2PP64 1363 aa23.11■■□□□ 1.29
CCM2-205ENST00000472223 BRD4O60885 1362 aaPredicted RBP23.11■■□□□ 1.29
CCM2-205ENST00000472223 AKAP12Q02952 1782 aa23.1■■□□□ 1.29
CCM2-205ENST00000472223 CPSF1Q10570 1443 aaKnown RBP23.09■■□□□ 1.29
CCM2-205ENST00000472223 USP6P35125 1406 aa23.08■■□□□ 1.28
CCM2-205ENST00000472223 XPCQ01831 940 aaPredicted RBP23.07■■□□□ 1.28
CCM2-205ENST00000472223 EDC4Q6P2E9 1401 aaKnown RBP23.07■■□□□ 1.28
CCM2-205ENST00000472223 CD163L1Q9NR16 1453 aa23.06■■□□□ 1.28
CCM2-205ENST00000472223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.06■■□□□ 1.28
CCM2-205ENST00000472223 CGNL1Q0VF96 1302 aa23.06■■□□□ 1.28
CCM2-205ENST00000472223 TTC21AQ8NDW8 1320 aa23.06■■□□□ 1.28
CCM2-205ENST00000472223 MON2Q7Z3U7 1717 aa23.05■■□□□ 1.28
CCM2-205ENST00000472223 LMOD2Q6P5Q4 547 aa23.05■■□□□ 1.28
CCM2-205ENST00000472223 DDX17Q92841 729 aaKnown RBP23.05■■□□□ 1.28
CCM2-205ENST00000472223 NSD3Q9BZ95 1437 aa23.05■■□□□ 1.28
CCM2-205ENST00000472223 TTC21BQ7Z4L5 1316 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms