RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-208ENST00000471894 CCDC7Q96M83 1385 aa14.64□□□□□ -0.07
PUM1-208ENST00000471894 SBNO2Q9Y2G9 1366 aa14.64□□□□□ -0.07
PUM1-208ENST00000471894 EVC2Q86UK5 1308 aa14.64□□□□□ -0.07
PUM1-208ENST00000471894 XRN1Q8IZH2 1706 aaKnown RBP14.63□□□□□ -0.07
PUM1-208ENST00000471894 DISP3Q9P2K9 1392 aa14.63□□□□□ -0.07
PUM1-208ENST00000471894 PROSER2Q86WR7 435 aaPredicted RBP14.63□□□□□ -0.07
PUM1-208ENST00000471894 PTCH1Q13635 1447 aa14.63□□□□□ -0.07
PUM1-208ENST00000471894 DDX10Q13206 875 aaKnown RBP14.62□□□□□ -0.07
PUM1-208ENST00000471894 SRPK2P78362 688 aaKnown RBP14.6□□□□□ -0.07
PUM1-208ENST00000471894 RBM33Q96EV2 1170 aaKnown RBP14.6□□□□□ -0.07
PUM1-208ENST00000471894 CDK19Q9BWU1 502 aa14.6□□□□□ -0.07
PUM1-208ENST00000471894 WASLO00401 505 aaPredicted RBP14.59□□□□□ -0.07
PUM1-208ENST00000471894 C14orf37Q86TY3 774 aa14.59□□□□□ -0.07
PUM1-208ENST00000471894 CABP2Q9NPB3 220 aa14.59□□□□□ -0.07
PUM1-208ENST00000471894 NWD1Q149M9 1564 aa14.59□□□□□ -0.07
PUM1-208ENST00000471894 PUS7Q96PZ0 661 aaKnown RBP14.58□□□□□ -0.08
PUM1-208ENST00000471894 ZNF335Q9H4Z2 1342 aaPredicted RBP14.58□□□□□ -0.08
PUM1-208ENST00000471894 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.58□□□□□ -0.08
PUM1-208ENST00000471894 NKTRP30414 1462 aaKnown RBP14.57□□□□□ -0.08
PUM1-208ENST00000471894 TULP4Q9NRJ4 1543 aa14.56□□□□□ -0.08
PUM1-208ENST00000471894 STRCP1A6NGW2 1772 aa14.56□□□□□ -0.08
PUM1-208ENST00000471894 DIEXFQ68CQ4 756 aaKnown RBP14.56□□□□□ -0.08
PUM1-208ENST00000471894 TMC1Q8TDI8 760 aa14.55□□□□□ -0.08
PUM1-208ENST00000471894 TMEM94Q12767 1356 aa14.53□□□□□ -0.08
PUM1-208ENST00000471894 ATAD2Q6PL18 1390 aa14.53□□□□□ -0.08
PUM1-208ENST00000471894 ADRA2BP18089 450 aa14.53□□□□□ -0.08
PUM1-208ENST00000471894 NUDT16Q96DE0 195 aaKnown RBP14.53□□□□□ -0.08
PUM1-208ENST00000471894 ADGRB2O60241 1585 aa14.52□□□□□ -0.08
PUM1-208ENST00000471894 NUTM2FA1L443 756 aa14.52□□□□□ -0.09
PUM1-208ENST00000471894 SLC12A5Q9H2X9 1139 aa14.52□□□□□ -0.09
PUM1-208ENST00000471894 C19orf44Q9H6X5 657 aa14.52□□□□□ -0.09
PUM1-208ENST00000471894 ADGRL3Q9HAR2 1447 aa14.51□□□□□ -0.09
PUM1-208ENST00000471894 NCOA3Q9Y6Q9 1424 aa14.51□□□□□ -0.09
PUM1-208ENST00000471894 PANK3Q9H999 370 aa14.51□□□□□ -0.09
PUM1-208ENST00000471894 NALCNQ8IZF0 1738 aa14.5□□□□□ -0.09
PUM1-208ENST00000471894 CABP1Q9NZU7 370 aa14.5□□□□□ -0.09
PUM1-208ENST00000471894 CCDC61Q9Y6R9 512 aa14.5□□□□□ -0.09
PUM1-208ENST00000471894 ATF3P18847 181 aa14.49□□□□□ -0.09
PUM1-208ENST00000471894 LRRC7Q96NW7 1537 aa14.49□□□□□ -0.09
PUM1-208ENST00000471894 PRR36Q9H6K5 1346 aa14.48□□□□□ -0.09
PUM1-208ENST00000471894 MSH6P52701 1360 aa14.47□□□□□ -0.09
PUM1-208ENST00000471894 NINLQ9Y2I6 1382 aa14.47□□□□□ -0.09
PUM1-208ENST00000471894 TERF2IPQ9NYB0 399 aa14.47□□□□□ -0.09
PUM1-208ENST00000471894 CDC42BPGQ6DT37 1551 aa14.47□□□□□ -0.09
PUM1-208ENST00000471894 MYOM1P52179 1685 aa14.46□□□□□ -0.09
PUM1-208ENST00000471894 HDGFL2Q7Z4V5 671 aaPredicted RBP14.46□□□□□ -0.09
PUM1-208ENST00000471894 CADPS2Q86UW7 1296 aa14.46□□□□□ -0.09
PUM1-208ENST00000471894 PPIP5K1Q6PFW1 1433 aa14.46□□□□□ -0.09
PUM1-208ENST00000471894 FMN2Q9NZ56 1722 aa14.46□□□□□ -0.1
PUM1-208ENST00000471894 ANKARQ7Z5J8 1434 aa14.45□□□□□ -0.1
PUM1-208ENST00000471894 KNSTRNQ9Y448 316 aa14.45□□□□□ -0.1
PUM1-208ENST00000471894 XIRP1Q702N8 1843 aaKnown RBP14.45□□□□□ -0.1
PUM1-208ENST00000471894 ATP7BP35670 1465 aa14.44□□□□□ -0.1
PUM1-208ENST00000471894 PLEKHG3A1L390 1219 aa14.44□□□□□ -0.1
PUM1-208ENST00000471894 RGPD8O14715 1765 aaPredicted RBP14.44□□□□□ -0.1
PUM1-208ENST00000471894 DCCP43146 1447 aa14.43□□□□□ -0.1
PUM1-208ENST00000471894 PER1O15534 1290 aaPredicted RBP14.43□□□□□ -0.1
PUM1-208ENST00000471894 ESCO1Q5FWF5 840 aa14.43□□□□□ -0.1
PUM1-208ENST00000471894 PMFBP1Q8TBY8 1022 aa14.43□□□□□ -0.1
PUM1-208ENST00000471894 CARD14Q9BXL6 1004 aa14.43□□□□□ -0.1
PUM1-208ENST00000471894 ANKRD36BQ8N2N9 1353 aa14.43□□□□□ -0.1
PUM1-208ENST00000471894 LTBP4Q8N2S1 1624 aa14.42□□□□□ -0.1
PUM1-208ENST00000471894 USP32Q8NFA0 1604 aa14.42□□□□□ -0.1
PUM1-208ENST00000471894 ANP32CO43423 234 aa14.42□□□□□ -0.1
PUM1-208ENST00000471894 CNGB1Q14028 1251 aaPredicted RBP14.42□□□□□ -0.1
PUM1-208ENST00000471894 NGDNQ8NEJ9 315 aaKnown RBP14.42□□□□□ -0.1
PUM1-208ENST00000471894 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
PUM1-208ENST00000471894 ACEP12821 1306 aa14.41□□□□□ -0.1
PUM1-208ENST00000471894 ITSN1Q15811 1721 aa14.41□□□□□ -0.1
PUM1-208ENST00000471894 PHF8Q9UPP1 1060 aa14.41□□□□□ -0.1
PUM1-208ENST00000471894 A0A1W2PP64 1363 aa14.41□□□□□ -0.1
PUM1-208ENST00000471894 ORAI2Q96SN7 254 aa14.4□□□□□ -0.1
PUM1-208ENST00000471894 TOPAZ1Q8N9V7 1692 aa14.39□□□□□ -0.11
PUM1-208ENST00000471894 C1orf167Q5SNV9 1468 aa14.39□□□□□ -0.11
PUM1-208ENST00000471894 CD163L1Q9NR16 1453 aa14.39□□□□□ -0.11
PUM1-208ENST00000471894 KTN1Q86UP2 1357 aaKnown RBP14.39□□□□□ -0.11
PUM1-208ENST00000471894 SLAIN2Q9P270 581 aa14.39□□□□□ -0.11
PUM1-208ENST00000471894 CC2D1BQ5T0F9 858 aaKnown RBP14.38□□□□□ -0.11
PUM1-208ENST00000471894 MST1RQ04912 1400 aa14.38□□□□□ -0.11
PUM1-208ENST00000471894 CPSF1Q10570 1443 aaKnown RBP14.38□□□□□ -0.11
PUM1-208ENST00000471894 NSD3Q9BZ95 1437 aa14.38□□□□□ -0.11
PUM1-208ENST00000471894 MIER1Q8N108 512 aa14.37□□□□□ -0.11
PUM1-208ENST00000471894 CGNL1Q0VF96 1302 aa14.37□□□□□ -0.11
PUM1-208ENST00000471894 POLR3AO14802 1390 aaPredicted RBP14.36□□□□□ -0.11
PUM1-208ENST00000471894 PSME1Q06323 249 aa14.36□□□□□ -0.11
PUM1-208ENST00000471894 AMER1Q5JTC6 1135 aaPredicted RBP14.36□□□□□ -0.11
PUM1-208ENST00000471894 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.36□□□□□ -0.11
PUM1-208ENST00000471894 AKAP12Q02952 1782 aa14.35□□□□□ -0.11
PUM1-208ENST00000471894 FOXO3O43524 673 aa14.35□□□□□ -0.11
PUM1-208ENST00000471894 EDC4Q6P2E9 1401 aaKnown RBP14.34□□□□□ -0.11
PUM1-208ENST00000471894 PRKRIP1Q9H875 184 aaPredicted RBP14.34□□□□□ -0.11
PUM1-208ENST00000471894 NPC1L1Q9UHC9 1359 aa14.34□□□□□ -0.11
PUM1-208ENST00000471894 USP6P35125 1406 aa14.33□□□□□ -0.11
PUM1-208ENST00000471894 FYB1O15117 783 aa14.33□□□□□ -0.12
PUM1-208ENST00000471894 RALBP1Q15311 655 aa14.33□□□□□ -0.12
PUM1-208ENST00000471894 TTC21BQ7Z4L5 1316 aa14.33□□□□□ -0.12
PUM1-208ENST00000471894 MON2Q7Z3U7 1717 aa14.32□□□□□ -0.12
PUM1-208ENST00000471894 PAK3O75914 559 aaPredicted RBP14.32□□□□□ -0.12
PUM1-208ENST00000471894 BRINP3Q76B58 766 aa14.32□□□□□ -0.12
PUM1-208ENST00000471894 KRT28Q7Z3Y7 464 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms