RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CDC42BPGQ6DT37 1551 aa19.78■□□□□ 0.76
HMGN1-211ENST00000471260 LAMC1P11047 1609 aa19.78■□□□□ 0.76
HMGN1-211ENST00000471260 MEX3CQ5U5Q3 659 aaKnown RBP19.78■□□□□ 0.76
HMGN1-211ENST00000471260 POTEAQ6S8J7 498 aa19.78■□□□□ 0.76
HMGN1-211ENST00000471260 LRP6O75581 1613 aa19.77■□□□□ 0.76
HMGN1-211ENST00000471260 WAPLQ7Z5K2 1190 aa19.77■□□□□ 0.76
HMGN1-211ENST00000471260 ORAI2Q96SN7 254 aa19.77■□□□□ 0.76
HMGN1-211ENST00000471260 SOS2Q07890 1332 aaPredicted RBP19.76■□□□□ 0.75
HMGN1-211ENST00000471260 CFAP70Q5T0N1 1121 aa19.76■□□□□ 0.75
HMGN1-211ENST00000471260 ZNF772Q68DY9 489 aaPredicted RBP19.76■□□□□ 0.75
HMGN1-211ENST00000471260 DDX17Q92841 729 aaKnown RBP19.75■□□□□ 0.75
HMGN1-211ENST00000471260 PNPLA6Q8IY17 1366 aa19.73■□□□□ 0.75
HMGN1-211ENST00000471260 ESCO1Q5FWF5 840 aa19.73■□□□□ 0.75
HMGN1-211ENST00000471260 NPHP3Q7Z494 1330 aa19.72■□□□□ 0.75
HMGN1-211ENST00000471260 PLEKHH1Q9ULM0 1364 aa19.71■□□□□ 0.75
HMGN1-211ENST00000471260 NUTM2BA6NNL0 878 aaPredicted RBP19.71■□□□□ 0.75
HMGN1-211ENST00000471260 NUTM2EB1AL46 878 aaPredicted RBP19.71■□□□□ 0.75
HMGN1-211ENST00000471260 NUTM2AQ8IVF1 878 aaPredicted RBP19.71■□□□□ 0.75
HMGN1-211ENST00000471260 DCAF11Q8TEB1 546 aa19.71■□□□□ 0.75
HMGN1-211ENST00000471260 DLC1Q96QB1 1528 aa19.69■□□□□ 0.74
HMGN1-211ENST00000471260 KDM2AQ9Y2K7 1162 aa19.68■□□□□ 0.74
HMGN1-211ENST00000471260 FOXO3O43524 673 aa19.66■□□□□ 0.74
HMGN1-211ENST00000471260 PRAM1Q96QH2 718 aa19.66■□□□□ 0.74
HMGN1-211ENST00000471260 ADGRB1O14514 1584 aa19.66■□□□□ 0.74
HMGN1-211ENST00000471260 POGKQ9P215 609 aa19.65■□□□□ 0.74
HMGN1-211ENST00000471260 FMN2Q9NZ56 1722 aa19.65■□□□□ 0.74
HMGN1-211ENST00000471260 NUTM2FA1L443 756 aa19.64■□□□□ 0.73
HMGN1-211ENST00000471260 PXDNQ92626 1479 aa19.63■□□□□ 0.73
HMGN1-211ENST00000471260 AFF2P51816 1311 aa19.63■□□□□ 0.73
HMGN1-211ENST00000471260 RXRBP28702 533 aa19.62■□□□□ 0.73
HMGN1-211ENST00000471260 C8orf37Q96NL8 207 aa19.62■□□□□ 0.73
HMGN1-211ENST00000471260 TRAK1Q9UPV9 953 aa19.61■□□□□ 0.73
HMGN1-211ENST00000471260 KIF1AQ12756 1690 aa19.61■□□□□ 0.73
HMGN1-211ENST00000471260 COL22A1Q8NFW1 1626 aaPredicted RBP19.61■□□□□ 0.73
HMGN1-211ENST00000471260 SAFB2Q14151 953 aaKnown RBP eCLIP19.6■□□□□ 0.73
HMGN1-211ENST00000471260 NGLY1Q96IV0 654 aa19.59■□□□□ 0.73
HMGN1-211ENST00000471260 PHF8Q9UPP1 1060 aa19.59■□□□□ 0.73
HMGN1-211ENST00000471260 ANKARQ7Z5J8 1434 aa19.59■□□□□ 0.73
HMGN1-211ENST00000471260 ADGRB2O60241 1585 aa19.58■□□□□ 0.73
HMGN1-211ENST00000471260 ADAMTS2O95450 1211 aa19.58■□□□□ 0.72
HMGN1-211ENST00000471260 PSME1Q06323 249 aa19.58■□□□□ 0.72
HMGN1-211ENST00000471260 CDK12Q9NYV4 1490 aaPredicted RBP19.58■□□□□ 0.72
HMGN1-211ENST00000471260 EIF3AQ14152 1382 aaKnown RBP19.57■□□□□ 0.72
HMGN1-211ENST00000471260 XPCQ01831 940 aaPredicted RBP19.57■□□□□ 0.72
HMGN1-211ENST00000471260 KRT28Q7Z3Y7 464 aa19.57■□□□□ 0.72
HMGN1-211ENST00000471260 SPATA31A3Q5VYP0 1347 aa19.56■□□□□ 0.72
HMGN1-211ENST00000471260 FNBP4Q8N3X1 1017 aaPredicted RBP19.56■□□□□ 0.72
HMGN1-211ENST00000471260 QTRT2Q9H974 415 aaKnown RBP19.56■□□□□ 0.72
HMGN1-211ENST00000471260 RBM6P78332 1123 aaKnown RBP19.55■□□□□ 0.72
HMGN1-211ENST00000471260 RGPD8O14715 1765 aaPredicted RBP19.53■□□□□ 0.72
HMGN1-211ENST00000471260 WASLO00401 505 aaPredicted RBP19.53■□□□□ 0.72
HMGN1-211ENST00000471260 USP21Q9UK80 565 aa19.53■□□□□ 0.72
HMGN1-211ENST00000471260 SBNO1A3KN83 1393 aa19.53■□□□□ 0.72
HMGN1-211ENST00000471260 KIAA1210Q9ULL0 1709 aa19.53■□□□□ 0.72
HMGN1-211ENST00000471260 MINK1Q8N4C8 1332 aaPredicted RBP19.52■□□□□ 0.72
HMGN1-211ENST00000471260 TRPC5Q9UL62 973 aaPredicted RBP19.52■□□□□ 0.72
HMGN1-211ENST00000471260 HIRIP3Q9BW71 556 aaPredicted RBP19.51■□□□□ 0.71
HMGN1-211ENST00000471260 TULP4Q9NRJ4 1543 aa19.5■□□□□ 0.71
HMGN1-211ENST00000471260 TNS3Q68CZ2 1445 aa19.5■□□□□ 0.71
HMGN1-211ENST00000471260 ARHGEF10O15013 1369 aa19.49■□□□□ 0.71
HMGN1-211ENST00000471260 USP32Q8NFA0 1604 aa19.49■□□□□ 0.71
HMGN1-211ENST00000471260 ARHGEF28Q8N1W1 1705 aaKnown RBP19.48■□□□□ 0.71
HMGN1-211ENST00000471260 PMFBP1Q8TBY8 1022 aa19.48■□□□□ 0.71
HMGN1-211ENST00000471260 GPRASP1Q5JY77 1395 aa19.46■□□□□ 0.71
HMGN1-211ENST00000471260 MARF1Q9Y4F3 1742 aaKnown RBP19.46■□□□□ 0.71
HMGN1-211ENST00000471260 PRR36Q9H6K5 1346 aa19.46■□□□□ 0.71
HMGN1-211ENST00000471260 ATRNO75882 1429 aa19.44■□□□□ 0.7
HMGN1-211ENST00000471260 BCL9LQ86UU0 1499 aa19.44■□□□□ 0.7
HMGN1-211ENST00000471260 NBPF1Q3BBV0 1214 aa19.44■□□□□ 0.7
HMGN1-211ENST00000471260 UPF1Q92900 1129 aaKnown RBP eCLIP19.44■□□□□ 0.7
HMGN1-211ENST00000471260 L3MBTL2Q969R5 705 aa19.44■□□□□ 0.7
HMGN1-211ENST00000471260 RGS12O14924 1447 aa19.43■□□□□ 0.7
HMGN1-211ENST00000471260 HAP1P54257 671 aaPredicted RBP19.43■□□□□ 0.7
HMGN1-211ENST00000471260 LMOD2Q6P5Q4 547 aa19.42■□□□□ 0.7
HMGN1-211ENST00000471260 NGDNQ8NEJ9 315 aaKnown RBP19.42■□□□□ 0.7
HMGN1-211ENST00000471260 NUDT16Q96DE0 195 aaKnown RBP19.42■□□□□ 0.7
HMGN1-211ENST00000471260 CDK19Q9BWU1 502 aa19.42■□□□□ 0.7
HMGN1-211ENST00000471260 UNC5CLQ8IV45 518 aa19.41■□□□□ 0.7
HMGN1-211ENST00000471260 ATP7BP35670 1465 aa19.41■□□□□ 0.7
HMGN1-211ENST00000471260 SLIT2O94813 1529 aa19.41■□□□□ 0.7
HMGN1-211ENST00000471260 SIN3AQ96ST3 1273 aa19.4■□□□□ 0.7
HMGN1-211ENST00000471260 CCDC61Q9Y6R9 512 aa19.4■□□□□ 0.7
HMGN1-211ENST00000471260 ITSN1Q15811 1721 aa19.39■□□□□ 0.7
HMGN1-211ENST00000471260 GJD4Q96KN9 370 aaPredicted RBP19.39■□□□□ 0.69
HMGN1-211ENST00000471260 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.39■□□□□ 0.69
HMGN1-211ENST00000471260 TRPM3Q9HCF6 1732 aaPredicted RBP19.39■□□□□ 0.69
HMGN1-211ENST00000471260 CABLES1Q8TDN4 633 aa19.38■□□□□ 0.69
HMGN1-211ENST00000471260 CENPJQ9HC77 1338 aaPredicted RBP19.38■□□□□ 0.69
HMGN1-211ENST00000471260 NEUROD1Q13562 356 aa19.37■□□□□ 0.69
HMGN1-211ENST00000471260 PLEKHG3A1L390 1219 aa19.36■□□□□ 0.69
HMGN1-211ENST00000471260 ALS2Q96Q42 1657 aa19.36■□□□□ 0.69
HMGN1-211ENST00000471260 POLR3AO14802 1390 aaPredicted RBP19.35■□□□□ 0.69
HMGN1-211ENST00000471260 PAK3O75914 559 aaPredicted RBP19.34■□□□□ 0.69
HMGN1-211ENST00000471260 ATAD2Q6PL18 1390 aa19.33■□□□□ 0.69
HMGN1-211ENST00000471260 TRIM26Q12899 539 aaPredicted RBP19.33■□□□□ 0.68
HMGN1-211ENST00000471260 VPS72Q15906 364 aa19.33■□□□□ 0.68
HMGN1-211ENST00000471260 ABCA3Q99758 1704 aa19.33■□□□□ 0.68
HMGN1-211ENST00000471260 NWD2Q9ULI1 1742 aa19.33■□□□□ 0.68
HMGN1-211ENST00000471260 FAM83GA6ND36 823 aa19.32■□□□□ 0.68
HMGN1-211ENST00000471260 SRPK2P78362 688 aaKnown RBP19.32■□□□□ 0.68
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