RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 NAIPQ13075 1403 aa11.71□□□□□ -0.53
UBE3C-205ENST00000470408 MTHFSP49914 203 aa11.71□□□□□ -0.53
UBE3C-205ENST00000470408 ST18O60284 1047 aa11.71□□□□□ -0.54
UBE3C-205ENST00000470408 G3BP1Q13283 466 aaKnown RBP eCLIP11.71□□□□□ -0.54
UBE3C-205ENST00000470408 SPG7Q9UQ90 795 aa11.71□□□□□ -0.54
UBE3C-205ENST00000470408 SYAP1Q96A49 352 aaPredicted RBP11.71□□□□□ -0.54
UBE3C-205ENST00000470408 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.71□□□□□ -0.54
UBE3C-205ENST00000470408 ABCC5O15440 1437 aa11.7□□□□□ -0.54
UBE3C-205ENST00000470408 CCDC30Q5VVM6 783 aa11.7□□□□□ -0.54
UBE3C-205ENST00000470408 SLC26A8Q96RN1 970 aa11.69□□□□□ -0.54
UBE3C-205ENST00000470408 CPLX2Q6PUV4 134 aaKnown RBP11.69□□□□□ -0.54
UBE3C-205ENST00000470408 TAOK2Q9UL54 1235 aa11.69□□□□□ -0.54
UBE3C-205ENST00000470408 CT47B1P0C2W7 299 aaPredicted RBP11.69□□□□□ -0.54
UBE3C-205ENST00000470408 RRP1P56182 461 aaKnown RBP11.69□□□□□ -0.54
UBE3C-205ENST00000470408 CABP1Q9NZU7 370 aa11.68□□□□□ -0.54
UBE3C-205ENST00000470408 KIAA2012Q0VF49 1180 aa11.68□□□□□ -0.54
UBE3C-205ENST00000470408 SF3B2Q13435 895 aaKnown RBP11.68□□□□□ -0.54
UBE3C-205ENST00000470408 IFIT2P09913 472 aaKnown RBP11.68□□□□□ -0.54
UBE3C-205ENST00000470408 RIC3Q7Z5B4 369 aa11.68□□□□□ -0.54
UBE3C-205ENST00000470408 PTPN23Q9H3S7 1636 aa11.68□□□□□ -0.54
UBE3C-205ENST00000470408 PLCH2O75038 1416 aa11.67□□□□□ -0.54
UBE3C-205ENST00000470408 LRPPRCP42704 1394 aaKnown RBP11.67□□□□□ -0.54
UBE3C-205ENST00000470408 PRDM11Q9NQV5 511 aa11.67□□□□□ -0.54
UBE3C-205ENST00000470408 DIAPH3Q9NSV4 1193 aa11.67□□□□□ -0.54
UBE3C-205ENST00000470408 GNAI3P08754 354 aa11.67□□□□□ -0.54
UBE3C-205ENST00000470408 NBPF1Q3BBV0 1214 aa11.67□□□□□ -0.54
UBE3C-205ENST00000470408 SYNE3Q6ZMZ3 975 aa11.67□□□□□ -0.54
UBE3C-205ENST00000470408 NCOA1Q15788 1441 aa11.67□□□□□ -0.54
UBE3C-205ENST00000470408 REC8O95072 547 aa11.67□□□□□ -0.54
UBE3C-205ENST00000470408 HMOX1P09601 288 aa11.67□□□□□ -0.54
UBE3C-205ENST00000470408 PPP2R1AP30153 589 aa11.67□□□□□ -0.54
UBE3C-205ENST00000470408 VPS37DQ86XT2 251 aa11.67□□□□□ -0.54
UBE3C-205ENST00000470408 TOMM22Q9NS69 142 aa11.67□□□□□ -0.54
UBE3C-205ENST00000470408 ERC2O15083 957 aa11.67□□□□□ -0.54
UBE3C-205ENST00000470408 ANKRD45Q5TZF3 282 aa11.66□□□□□ -0.54
UBE3C-205ENST00000470408 TRIM34Q9BYJ4 488 aa11.66□□□□□ -0.54
UBE3C-205ENST00000470408 NUTM2GQ5VZR2 741 aa11.66□□□□□ -0.54
UBE3C-205ENST00000470408 RBM33Q96EV2 1170 aaKnown RBP11.66□□□□□ -0.54
UBE3C-205ENST00000470408 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
UBE3C-205ENST00000470408 MFAP1P55081 439 aaKnown RBP11.65□□□□□ -0.54
UBE3C-205ENST00000470408 TOM1L2Q6ZVM7 507 aa11.65□□□□□ -0.54
UBE3C-205ENST00000470408 ZKSCAN1P17029 563 aaPredicted RBP11.65□□□□□ -0.54
UBE3C-205ENST00000470408 TPM4P67936 248 aa11.65□□□□□ -0.54
UBE3C-205ENST00000470408 KIF6Q6ZMV9 814 aa11.65□□□□□ -0.54
UBE3C-205ENST00000470408 NUDT16Q96DE0 195 aaKnown RBP11.65□□□□□ -0.54
UBE3C-205ENST00000470408 SLC12A5Q9H2X9 1139 aa11.65□□□□□ -0.54
UBE3C-205ENST00000470408 AKAP17AQ02040 695 aaKnown RBP11.65□□□□□ -0.55
UBE3C-205ENST00000470408 ZNF428Q96B54 188 aa11.65□□□□□ -0.55
UBE3C-205ENST00000470408 ASXL2Q76L83 1435 aa11.65□□□□□ -0.55
UBE3C-205ENST00000470408 HSP90AA2PQ14568 343 aaPredicted RBP11.64□□□□□ -0.55
UBE3C-205ENST00000470408 RNF20Q5VTR2 975 aa11.64□□□□□ -0.55
UBE3C-205ENST00000470408 TCP11L2Q8N4U5 519 aa11.64□□□□□ -0.55
UBE3C-205ENST00000470408 PRKAR2BP31323 418 aa11.64□□□□□ -0.55
UBE3C-205ENST00000470408 ATP6V1DQ9Y5K8 247 aa11.64□□□□□ -0.55
UBE3C-205ENST00000470408 PHF23Q9BUL5 403 aaPredicted RBP11.64□□□□□ -0.55
UBE3C-205ENST00000470408 UGGT2Q9NYU1 1516 aa11.63□□□□□ -0.55
UBE3C-205ENST00000470408 TPRNQ4KMQ1 711 aa11.63□□□□□ -0.55
UBE3C-205ENST00000470408 BCL2L13Q9BXK5 485 aa11.63□□□□□ -0.55
UBE3C-205ENST00000470408 NINLQ9Y2I6 1382 aa11.63□□□□□ -0.55
UBE3C-205ENST00000470408 WDR7Q9Y4E6 1490 aa11.63□□□□□ -0.55
UBE3C-205ENST00000470408 RAPGEF6Q8TEU7 1601 aa11.63□□□□□ -0.55
UBE3C-205ENST00000470408 UBTFL1P0CB47 393 aaPredicted RBP11.63□□□□□ -0.55
UBE3C-205ENST00000470408 GSE1Q14687 1217 aa11.62□□□□□ -0.55
UBE3C-205ENST00000470408 COG6Q9Y2V7 657 aa11.62□□□□□ -0.55
UBE3C-205ENST00000470408 TNRQ92752 1358 aa11.62□□□□□ -0.55
UBE3C-205ENST00000470408 ZNF518AQ6AHZ1 1483 aa11.62□□□□□ -0.55
UBE3C-205ENST00000470408 SPRYD3Q8NCJ5 442 aa11.62□□□□□ -0.55
UBE3C-205ENST00000470408 RILPL2Q969X0 211 aa11.62□□□□□ -0.55
UBE3C-205ENST00000470408 STRN4Q9NRL3 753 aa11.62□□□□□ -0.55
UBE3C-205ENST00000470408 FCHSD2O94868 740 aa11.62□□□□□ -0.55
UBE3C-205ENST00000470408 CABP4P57796 275 aa11.62□□□□□ -0.55
UBE3C-205ENST00000470408 ZNF530Q6P9A1 599 aaPredicted RBP11.62□□□□□ -0.55
UBE3C-205ENST00000470408 WDR63Q8IWG1 891 aa11.62□□□□□ -0.55
UBE3C-205ENST00000470408 TRDNQ13061 729 aa11.62□□□□□ -0.55
UBE3C-205ENST00000470408 DRC7Q8IY82 874 aa11.61□□□□□ -0.55
UBE3C-205ENST00000470408 FAM135AQ9P2D6 1515 aa11.61□□□□□ -0.55
UBE3C-205ENST00000470408 ATP10BO94823 1461 aa11.61□□□□□ -0.55
UBE3C-205ENST00000470408 WDR97A6NE52 1622 aa11.61□□□□□ -0.55
UBE3C-205ENST00000470408 NBPF8Q3BBV2 869 aa11.61□□□□□ -0.55
UBE3C-205ENST00000470408 SLKQ9H2G2 1235 aaPredicted RBP11.61□□□□□ -0.55
UBE3C-205ENST00000470408 GPATCH8Q9UKJ3 1502 aaKnown RBP11.61□□□□□ -0.55
UBE3C-205ENST00000470408 IDI1Q13907 227 aa11.61□□□□□ -0.55
UBE3C-205ENST00000470408 CADPS2Q86UW7 1296 aa11.61□□□□□ -0.55
UBE3C-205ENST00000470408 FAM161AQ3B820 660 aa11.6□□□□□ -0.55
UBE3C-205ENST00000470408 ERC1Q8IUD2 1116 aa11.6□□□□□ -0.55
UBE3C-205ENST00000470408 GZF1Q9H116 711 aaPredicted RBP11.6□□□□□ -0.55
UBE3C-205ENST00000470408 MARCH6O60337 910 aa11.6□□□□□ -0.55
UBE3C-205ENST00000470408 ADAMTS8Q9UP79 889 aa11.6□□□□□ -0.55
UBE3C-205ENST00000470408 SULT6B1Q6IMI4 303 aa11.6□□□□□ -0.55
UBE3C-205ENST00000470408 PHF8Q9UPP1 1060 aa11.6□□□□□ -0.55
UBE3C-205ENST00000470408 CTDP1Q9Y5B0 961 aaPredicted RBP11.6□□□□□ -0.55
UBE3C-205ENST00000470408 AMOTL2Q9Y2J4 779 aa11.59□□□□□ -0.55
UBE3C-205ENST00000470408 ADAMTS12P58397 1594 aa11.59□□□□□ -0.55
UBE3C-205ENST00000470408 CLSTN1O94985 981 aa11.59□□□□□ -0.55
UBE3C-205ENST00000470408 ABCC10Q5T3U5 1492 aa11.59□□□□□ -0.55
UBE3C-205ENST00000470408 DDX11L8A8MPP1 907 aa11.59□□□□□ -0.55
UBE3C-205ENST00000470408 RASSF8Q8NHQ8 419 aa11.59□□□□□ -0.55
UBE3C-205ENST00000470408 WDR62O43379 1518 aa11.59□□□□□ -0.55
UBE3C-205ENST00000470408 DUOX2Q9NRD8 1548 aa11.59□□□□□ -0.55
UBE3C-205ENST00000470408 KDM5BQ9UGL1 1544 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms