RNA–Protein interactions for RNA: ENST00000469641.5

ATP13A1-205, Transcript of ATPase 13A1, human

TSL 2

Gene ATP13A1, Length 4,241 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP13A1-205	ENST00000469641	SPATA31E1	Q6ZUB1	1445 aa		13.15	□□□□□ -0.3
ATP13A1-205	ENST00000469641	PANK1	Q8TE04	598 aa		13.15	□□□□□ -0.3
ATP13A1-205	ENST00000469641	FAM13B	Q9NYF5	915 aa		13.15	□□□□□ -0.3
ATP13A1-205	ENST00000469641	CALD1	Q05682	793 aa	Known RBP	13.15	□□□□□ -0.31
ATP13A1-205	ENST00000469641	ABTB2	Q8N961	1025 aa		13.15	□□□□□ -0.31
ATP13A1-205	ENST00000469641	SAMD9	Q5K651	1589 aa		13.14	□□□□□ -0.31
ATP13A1-205	ENST00000469641	NGEF	Q8N5V2	710 aa		13.14	□□□□□ -0.31
ATP13A1-205	ENST00000469641	TAOK2	Q9UL54	1235 aa		13.14	□□□□□ -0.31
ATP13A1-205	ENST00000469641	WDR7	Q9Y4E6	1490 aa		13.14	□□□□□ -0.31
ATP13A1-205	ENST00000469641	PROSER2	Q86WR7	435 aa	Predicted RBP	13.14	□□□□□ -0.31
ATP13A1-205	ENST00000469641	TSR2	Q969E8	191 aa	Known RBP	13.14	□□□□□ -0.31
ATP13A1-205	ENST00000469641	DISP3	Q9P2K9	1392 aa		13.14	□□□□□ -0.31
ATP13A1-205	ENST00000469641	C20orf194	Q5TEA3	1177 aa		13.14	□□□□□ -0.31
ATP13A1-205	ENST00000469641	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.14	□□□□□ -0.31
ATP13A1-205	ENST00000469641	CFAP65	Q6ZU64	1925 aa	Known RBP	13.14	□□□□□ -0.31
ATP13A1-205	ENST00000469641	IPO8	O15397	1037 aa	Known RBP	13.13	□□□□□ -0.31
ATP13A1-205	ENST00000469641	KIAA2012	Q0VF49	1180 aa		13.13	□□□□□ -0.31
ATP13A1-205	ENST00000469641	ERCC6L2	Q5T890	1561 aa		13.13	□□□□□ -0.31
ATP13A1-205	ENST00000469641	DDX11L8	A8MPP1	907 aa		13.13	□□□□□ -0.31
ATP13A1-205	ENST00000469641	OS9	Q13438	667 aa	Predicted RBP	13.12	□□□□□ -0.31
ATP13A1-205	ENST00000469641	RALGAPB	Q86X10	1494 aa		13.12	□□□□□ -0.31
ATP13A1-205	ENST00000469641	EIF2S2	P20042	333 aa	Known RBP	13.12	□□□□□ -0.31
ATP13A1-205	ENST00000469641	PRKAR2B	P31323	418 aa		13.12	□□□□□ -0.31
ATP13A1-205	ENST00000469641	DDX49	Q9Y6V7	483 aa	Known RBP	13.12	□□□□□ -0.31
ATP13A1-205	ENST00000469641	FAM43A	Q8N2R8	423 aa		13.12	□□□□□ -0.31
ATP13A1-205	ENST00000469641	THUMPD2	Q9BTF0	503 aa	Known RBP	13.12	□□□□□ -0.31
ATP13A1-205	ENST00000469641	CHMP4B	Q9H444	224 aa	Known RBP	13.12	□□□□□ -0.31
ATP13A1-205	ENST00000469641	NCKAP5L	Q9HCH0	1330 aa		13.11	□□□□□ -0.31
ATP13A1-205	ENST00000469641	PZP	P20742	1482 aa		13.11	□□□□□ -0.31
ATP13A1-205	ENST00000469641	BCAR3	O75815	825 aa		13.1	□□□□□ -0.31
ATP13A1-205	ENST00000469641	DNAJC5	Q9H3Z4	198 aa		13.1	□□□□□ -0.31
ATP13A1-205	ENST00000469641	KDM5B	Q9UGL1	1544 aa		13.1	□□□□□ -0.31
ATP13A1-205	ENST00000469641	PTMS	P20962	102 aa		13.1	□□□□□ -0.31
ATP13A1-205	ENST00000469641	UBE2Q2	Q8WVN8	375 aa		13.1	□□□□□ -0.31
ATP13A1-205	ENST00000469641	NME9	Q86XW9	330 aa		13.1	□□□□□ -0.31
ATP13A1-205	ENST00000469641	RUNDC1	Q96C34	613 aa		13.1	□□□□□ -0.31
ATP13A1-205	ENST00000469641	NUDT16	Q96DE0	195 aa	Known RBP	13.1	□□□□□ -0.31
ATP13A1-205	ENST00000469641	GCC2	Q8IWJ2	1684 aa		13.1	□□□□□ -0.31
ATP13A1-205	ENST00000469641	KDM6B	O15054	1643 aa		13.09	□□□□□ -0.31
ATP13A1-205	ENST00000469641	ABCC2	Q92887	1545 aa		13.09	□□□□□ -0.31
ATP13A1-205	ENST00000469641	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.09	□□□□□ -0.31
ATP13A1-205	ENST00000469641	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.09	□□□□□ -0.31
ATP13A1-205	ENST00000469641	LRPPRC	P42704	1394 aa	Known RBP	13.09	□□□□□ -0.31
ATP13A1-205	ENST00000469641	ATF3	P18847	181 aa		13.08	□□□□□ -0.32
ATP13A1-205	ENST00000469641	SULT6B1	Q6IMI4	303 aa		13.08	□□□□□ -0.32
ATP13A1-205	ENST00000469641	ZRSR1	Q15695	479 aa	Known RBP	13.08	□□□□□ -0.32
ATP13A1-205	ENST00000469641	DRC7	Q8IY82	874 aa		13.08	□□□□□ -0.32
ATP13A1-205	ENST00000469641	CHMP5	Q9NZZ3	219 aa		13.08	□□□□□ -0.32
ATP13A1-205	ENST00000469641	AMOTL2	Q9Y2J4	779 aa		13.08	□□□□□ -0.32
ATP13A1-205	ENST00000469641	PARD3	Q8TEW0	1356 aa		13.07	□□□□□ -0.32
ATP13A1-205	ENST00000469641	FOXO3	O43524	673 aa		13.07	□□□□□ -0.32
ATP13A1-205	ENST00000469641	ANKLE2	Q86XL3	938 aa		13.07	□□□□□ -0.32
ATP13A1-205	ENST00000469641	NSD3	Q9BZ95	1437 aa		13.07	□□□□□ -0.32
ATP13A1-205	ENST00000469641	ZKSCAN2	Q63HK3	967 aa		13.07	□□□□□ -0.32
ATP13A1-205	ENST00000469641	STK31	Q9BXU1	1019 aa		13.07	□□□□□ -0.32
ATP13A1-205	ENST00000469641	NLRP2	Q9NX02	1062 aa		13.07	□□□□□ -0.32
ATP13A1-205	ENST00000469641	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.07	□□□□□ -0.32
ATP13A1-205	ENST00000469641	A2M	P01023	1474 aa		13.06	□□□□□ -0.32
ATP13A1-205	ENST00000469641	NPHP1	O15259	732 aa		13.06	□□□□□ -0.32
ATP13A1-205	ENST00000469641	C14orf93	Q9H972	538 aa	Known RBP	13.06	□□□□□ -0.32
ATP13A1-205	ENST00000469641	EMILIN1	Q9Y6C2	1016 aa		13.06	□□□□□ -0.32
ATP13A1-205	ENST00000469641	CCDC61	Q9Y6R9	512 aa		13.06	□□□□□ -0.32
ATP13A1-205	ENST00000469641	DNMT1	P26358	1616 aa	Known RBP	13.06	□□□□□ -0.32
ATP13A1-205	ENST00000469641	SLFN5	Q08AF3	891 aa		13.06	□□□□□ -0.32
ATP13A1-205	ENST00000469641	DCTN1	Q14203	1278 aa		13.06	□□□□□ -0.32
ATP13A1-205	ENST00000469641		A0A0U1RQG5	324 aa	Predicted RBP	13.05	□□□□□ -0.32
ATP13A1-205	ENST00000469641	ZC3H6	P61129	1189 aa	Known RBP	13.05	□□□□□ -0.32
ATP13A1-205	ENST00000469641	ZRANB1	Q9UGI0	708 aa		13.05	□□□□□ -0.32
ATP13A1-205	ENST00000469641	DUSP27	Q5VZP5	1158 aa		13.05	□□□□□ -0.32
ATP13A1-205	ENST00000469641	FAM135A	Q9P2D6	1515 aa		13.05	□□□□□ -0.32
ATP13A1-205	ENST00000469641	GOLGA6L4	A6NEF3	574 aa		13.05	□□□□□ -0.32
ATP13A1-205	ENST00000469641	ANKRD45	Q5TZF3	282 aa		13.05	□□□□□ -0.32
ATP13A1-205	ENST00000469641	TESK2	Q96S53	571 aa		13.05	□□□□□ -0.32
ATP13A1-205	ENST00000469641	EXOSC9	Q06265	439 aa	Known RBP	13.05	□□□□□ -0.32
ATP13A1-205	ENST00000469641	NOL8	Q76FK4	1167 aa	Known RBP	13.05	□□□□□ -0.32
ATP13A1-205	ENST00000469641	PDE3A	Q14432	1141 aa		13.04	□□□□□ -0.32
ATP13A1-205	ENST00000469641	TEF	Q10587	303 aa		13.04	□□□□□ -0.32
ATP13A1-205	ENST00000469641	SYTL4	Q96C24	671 aa	Predicted RBP	13.04	□□□□□ -0.32
ATP13A1-205	ENST00000469641	MIS18A	Q9NYP9	233 aa		13.04	□□□□□ -0.32
ATP13A1-205	ENST00000469641	RPGRIP1L	Q68CZ1	1315 aa		13.04	□□□□□ -0.32
ATP13A1-205	ENST00000469641	MRE11	P49959	708 aa		13.04	□□□□□ -0.32
ATP13A1-205	ENST00000469641	EVA1C	P58658	441 aa		13.04	□□□□□ -0.32
ATP13A1-205	ENST00000469641	UHRF1BP1	Q6BDS2	1440 aa		13.04	□□□□□ -0.32
ATP13A1-205	ENST00000469641	TRAK2	O60296	914 aa		13.03	□□□□□ -0.32
ATP13A1-205	ENST00000469641	HSPA2	P54652	639 aa		13.03	□□□□□ -0.32
ATP13A1-205	ENST00000469641	C22orf23	Q9BZE7	217 aa		13.03	□□□□□ -0.32
ATP13A1-205	ENST00000469641	PER1	O15534	1290 aa	Predicted RBP	13.03	□□□□□ -0.32
ATP13A1-205	ENST00000469641	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.03	□□□□□ -0.32
ATP13A1-205	ENST00000469641	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.03	□□□□□ -0.32
ATP13A1-205	ENST00000469641	CHMP3	Q9Y3E7	222 aa		13.02	□□□□□ -0.32
ATP13A1-205	ENST00000469641	DZIP1L	Q8IYY4	767 aa	Known RBP	13.02	□□□□□ -0.33
ATP13A1-205	ENST00000469641	LNPK	Q9C0E8	428 aa		13.02	□□□□□ -0.33
ATP13A1-205	ENST00000469641	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.02	□□□□□ -0.33
ATP13A1-205	ENST00000469641	USHBP1	Q8N6Y0	703 aa		13.02	□□□□□ -0.33
ATP13A1-205	ENST00000469641	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.01	□□□□□ -0.33
ATP13A1-205	ENST00000469641	RBM10	P98175	930 aa	Known RBP	13.01	□□□□□ -0.33
ATP13A1-205	ENST00000469641	ARHGEF12	Q9NZN5	1544 aa		13	□□□□□ -0.33
ATP13A1-205	ENST00000469641	KCNJ4	P48050	445 aa		13	□□□□□ -0.33
ATP13A1-205	ENST00000469641	ZNF518A	Q6AHZ1	1483 aa		13	□□□□□ -0.33
ATP13A1-205	ENST00000469641	PIP4K2B	P78356	416 aa		13	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms