RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 ANKRD50Q9ULJ7 1429 aa19.91■□□□□ 0.78
HDAC6-217ENST00000469223 ORAI2Q96SN7 254 aa19.89■□□□□ 0.77
HDAC6-217ENST00000469223 PXDNQ92626 1479 aa19.88■□□□□ 0.77
HDAC6-217ENST00000469223 PLCH1Q4KWH8 1693 aa19.87■□□□□ 0.77
HDAC6-217ENST00000469223 USP32Q8NFA0 1604 aa19.87■□□□□ 0.77
HDAC6-217ENST00000469223 SLIT2O94813 1529 aa19.86■□□□□ 0.77
HDAC6-217ENST00000469223 RGPD1P0DJD0 1748 aa19.86■□□□□ 0.77
HDAC6-217ENST00000469223 YY1P25490 414 aa19.84■□□□□ 0.77
HDAC6-217ENST00000469223 TNS1Q9HBL0 1735 aaKnown RBP19.82■□□□□ 0.76
HDAC6-217ENST00000469223 NWD2Q9ULI1 1742 aa19.82■□□□□ 0.76
HDAC6-217ENST00000469223 NEXMIFQ5QGS0 1516 aa19.81■□□□□ 0.76
HDAC6-217ENST00000469223 UNC5CLQ8IV45 518 aa19.81■□□□□ 0.76
HDAC6-217ENST00000469223 CDC42BPGQ6DT37 1551 aa19.8■□□□□ 0.76
HDAC6-217ENST00000469223 SEPT12Q8IYM1 358 aa19.8■□□□□ 0.76
HDAC6-217ENST00000469223 ABCA3Q99758 1704 aa19.79■□□□□ 0.76
HDAC6-217ENST00000469223 BAG6P46379 1132 aa19.79■□□□□ 0.76
HDAC6-217ENST00000469223 NPHP3Q7Z494 1330 aa19.78■□□□□ 0.76
HDAC6-217ENST00000469223 ROBO2Q9HCK4 1378 aa19.78■□□□□ 0.76
HDAC6-217ENST00000469223 XPCQ01831 940 aaPredicted RBP19.77■□□□□ 0.76
HDAC6-217ENST00000469223 R3HDM1Q15032 1099 aaKnown RBP19.76■□□□□ 0.75
HDAC6-217ENST00000469223 ZNF326Q5BKZ1 582 aaKnown RBP19.75■□□□□ 0.75
HDAC6-217ENST00000469223 CLTCL1P53675 1640 aa19.74■□□□□ 0.75
HDAC6-217ENST00000469223 KRT27Q7Z3Y8 459 aa19.74■□□□□ 0.75
HDAC6-217ENST00000469223 KIF1BO60333 1816 aa19.73■□□□□ 0.75
HDAC6-217ENST00000469223 NRAPQ86VF7 1730 aa19.73■□□□□ 0.75
HDAC6-217ENST00000469223 PRAG1Q86YV5 1406 aa19.72■□□□□ 0.75
HDAC6-217ENST00000469223 ESCO1Q5FWF5 840 aa19.71■□□□□ 0.75
HDAC6-217ENST00000469223 KIF1AQ12756 1690 aa19.71■□□□□ 0.75
HDAC6-217ENST00000469223 EN1Q05925 392 aaPredicted RBP19.7■□□□□ 0.74
HDAC6-217ENST00000469223 HFM1A2PYH4 1435 aa19.69■□□□□ 0.74
HDAC6-217ENST00000469223 VPS72Q15906 364 aa19.69■□□□□ 0.74
HDAC6-217ENST00000469223 CCDC9Q9Y3X0 531 aaKnown RBP19.69■□□□□ 0.74
HDAC6-217ENST00000469223 ADGRB2O60241 1585 aa19.69■□□□□ 0.74
HDAC6-217ENST00000469223 CAMTA1Q9Y6Y1 1673 aa19.68■□□□□ 0.74
HDAC6-217ENST00000469223 A0A0G2JS52 829 aa19.68■□□□□ 0.74
HDAC6-217ENST00000469223 FOXO3O43524 673 aa19.68■□□□□ 0.74
HDAC6-217ENST00000469223 MYT1Q01538 1121 aa19.68■□□□□ 0.74
HDAC6-217ENST00000469223 RREB1Q92766 1687 aa19.67■□□□□ 0.74
HDAC6-217ENST00000469223 DISP2A7MBM2 1401 aa19.67■□□□□ 0.74
HDAC6-217ENST00000469223 NUP188Q5SRE5 1749 aa19.66■□□□□ 0.74
HDAC6-217ENST00000469223 FMN2Q9NZ56 1722 aa19.66■□□□□ 0.74
HDAC6-217ENST00000469223 FAM50AQ14320 339 aaKnown RBP19.65■□□□□ 0.74
HDAC6-217ENST00000469223 LRPPRCP42704 1394 aaKnown RBP19.65■□□□□ 0.74
HDAC6-217ENST00000469223 ONECUT3O60422 494 aaPredicted RBP19.64■□□□□ 0.73
HDAC6-217ENST00000469223 NUP155O75694 1391 aa19.64■□□□□ 0.73
HDAC6-217ENST00000469223 SPATA31A3Q5VYP0 1347 aa19.63■□□□□ 0.73
HDAC6-217ENST00000469223 RGPD8O14715 1765 aaPredicted RBP19.62■□□□□ 0.73
HDAC6-217ENST00000469223 CCDC144AA2RUR9 1427 aa19.62■□□□□ 0.73
HDAC6-217ENST00000469223 NAIPQ13075 1403 aa19.62■□□□□ 0.73
HDAC6-217ENST00000469223 THSD7AQ9UPZ6 1657 aa19.62■□□□□ 0.73
HDAC6-217ENST00000469223 UTRNP46939 3433 aa19.61■□□□□ 0.73
HDAC6-217ENST00000469223 HAP1P54257 671 aaPredicted RBP19.61■□□□□ 0.73
HDAC6-217ENST00000469223 PPLO60437 1756 aa19.61■□□□□ 0.73
HDAC6-217ENST00000469223 TNS3Q68CZ2 1445 aa19.6■□□□□ 0.73
HDAC6-217ENST00000469223 IFT172Q9UG01 1749 aa19.6■□□□□ 0.73
HDAC6-217ENST00000469223 FAM182BQ5T319 152 aa19.6■□□□□ 0.73
HDAC6-217ENST00000469223 IFFO2Q5TF58 517 aa19.6■□□□□ 0.73
HDAC6-217ENST00000469223 NUTM2FA1L443 756 aa19.59■□□□□ 0.73
HDAC6-217ENST00000469223 PLEKHG5O94827 1062 aa19.59■□□□□ 0.73
HDAC6-217ENST00000469223 EZH2Q15910 746 aaKnown RBP19.59■□□□□ 0.73
HDAC6-217ENST00000469223 FAM98CQ17RN3 349 aaKnown RBP19.59■□□□□ 0.73
HDAC6-217ENST00000469223 CABLES1Q8TDN4 633 aa19.57■□□□□ 0.72
HDAC6-217ENST00000469223 CEP350Q5VT06 3117 aa19.56■□□□□ 0.72
HDAC6-217ENST00000469223 APLP2Q06481 763 aa19.56■□□□□ 0.72
HDAC6-217ENST00000469223 COL14A1Q05707 1796 aaKnown RBP19.55■□□□□ 0.72
HDAC6-217ENST00000469223 SENP3-EIF4A1A0A087X0R7 540 aa19.55■□□□□ 0.72
HDAC6-217ENST00000469223 KNDC1Q76NI1 1749 aa19.55■□□□□ 0.72
HDAC6-217ENST00000469223 NINLQ9Y2I6 1382 aa19.54■□□□□ 0.72
HDAC6-217ENST00000469223 ROCK1Q13464 1354 aa19.53■□□□□ 0.72
HDAC6-217ENST00000469223 DCAF8L1A6NGE4 600 aa19.52■□□□□ 0.72
HDAC6-217ENST00000469223 PPP1R1BQ9UD71 204 aaPredicted RBP19.52■□□□□ 0.72
HDAC6-217ENST00000469223 CHD4Q14839 1912 aa19.51■□□□□ 0.71
HDAC6-217ENST00000469223 KRT28Q7Z3Y7 464 aa19.5■□□□□ 0.71
HDAC6-217ENST00000469223 CAMKK2Q96RR4 588 aa19.5■□□□□ 0.71
HDAC6-217ENST00000469223 PARD3Q8TEW0 1356 aa19.49■□□□□ 0.71
HDAC6-217ENST00000469223 ZNF784Q8NCA9 323 aaPredicted RBP19.48■□□□□ 0.71
HDAC6-217ENST00000469223 FAM83GA6ND36 823 aa19.47■□□□□ 0.71
HDAC6-217ENST00000469223 VGFO15240 615 aaPredicted RBP19.47■□□□□ 0.71
HDAC6-217ENST00000469223 TECPR2O15040 1411 aa19.47■□□□□ 0.71
HDAC6-217ENST00000469223 NRKQ7Z2Y5 1582 aa19.47■□□□□ 0.71
HDAC6-217ENST00000469223 TRPM3Q9HCF6 1732 aaPredicted RBP19.47■□□□□ 0.71
HDAC6-217ENST00000469223 CRYBG1Q9Y4K1 1723 aa19.47■□□□□ 0.71
HDAC6-217ENST00000469223 ARHGEF10O15013 1369 aa19.46■□□□□ 0.71
HDAC6-217ENST00000469223 TRIM37O94972 964 aa19.46■□□□□ 0.71
HDAC6-217ENST00000469223 LMOD2Q6P5Q4 547 aa19.46■□□□□ 0.71
HDAC6-217ENST00000469223 PLEKHH1Q9ULM0 1364 aa19.45■□□□□ 0.7
HDAC6-217ENST00000469223 BTG4Q9NY30 223 aa19.45■□□□□ 0.7
HDAC6-217ENST00000469223 MYOM1P52179 1685 aa19.45■□□□□ 0.7
HDAC6-217ENST00000469223 ALS2Q96Q42 1657 aa19.45■□□□□ 0.7
HDAC6-217ENST00000469223 SBNO1A3KN83 1393 aa19.44■□□□□ 0.7
HDAC6-217ENST00000469223 NRXN1Q9ULB1 1477 aa19.44■□□□□ 0.7
HDAC6-217ENST00000469223 WAPLQ7Z5K2 1190 aa19.44■□□□□ 0.7
HDAC6-217ENST00000469223 SPON1Q9HCB6 807 aa19.44■□□□□ 0.7
HDAC6-217ENST00000469223 CASZ1Q86V15 1759 aa19.44■□□□□ 0.7
HDAC6-217ENST00000469223 SPATA31A5Q5VU36 1347 aa19.43■□□□□ 0.7
HDAC6-217ENST00000469223 SPATA31A7Q8IWB4 1347 aa19.43■□□□□ 0.7
HDAC6-217ENST00000469223 APBA3O96018 575 aa19.42■□□□□ 0.7
HDAC6-217ENST00000469223 RRBP1Q9P2E9 1410 aaKnown RBP19.42■□□□□ 0.7
HDAC6-217ENST00000469223 STK26Q9P289 416 aa19.41■□□□□ 0.7
HDAC6-217ENST00000469223 LOC105371045A0A1W2PR82 267 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms