RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 ABCC11Q96J66 1382 aa18.42■□□□□ 0.54
ABCF1-204ENST00000468958 WAPLQ7Z5K2 1190 aa18.42■□□□□ 0.54
ABCF1-204ENST00000468958 LRP6O75581 1613 aa18.41■□□□□ 0.54
ABCF1-204ENST00000468958 DDX17Q92841 729 aaKnown RBP18.41■□□□□ 0.54
ABCF1-204ENST00000468958 ADRA2BP18089 450 aa18.4■□□□□ 0.54
ABCF1-204ENST00000468958 RGS17Q9UGC6 210 aaPredicted RBP18.4■□□□□ 0.54
ABCF1-204ENST00000468958 JCADQ9P266 1359 aa18.39■□□□□ 0.53
ABCF1-204ENST00000468958 ARHGEF28Q8N1W1 1705 aaKnown RBP18.37■□□□□ 0.53
ABCF1-204ENST00000468958 DCAF11Q8TEB1 546 aa18.37■□□□□ 0.53
ABCF1-204ENST00000468958 ORAI2Q96SN7 254 aa18.37■□□□□ 0.53
ABCF1-204ENST00000468958 KDM2AQ9Y2K7 1162 aa18.37■□□□□ 0.53
ABCF1-204ENST00000468958 DLC1Q96QB1 1528 aa18.36■□□□□ 0.53
ABCF1-204ENST00000468958 USP32Q8NFA0 1604 aa18.35■□□□□ 0.53
ABCF1-204ENST00000468958 KIAA1210Q9ULL0 1709 aa18.34■□□□□ 0.53
ABCF1-204ENST00000468958 ADGRB2O60241 1585 aa18.32■□□□□ 0.52
ABCF1-204ENST00000468958 NUTM2FA1L443 756 aa18.31■□□□□ 0.52
ABCF1-204ENST00000468958 SIRT1Q96EB6 747 aa18.3■□□□□ 0.52
ABCF1-204ENST00000468958 KIF1AQ12756 1690 aa18.29■□□□□ 0.52
ABCF1-204ENST00000468958 PXDNQ92626 1479 aa18.29■□□□□ 0.52
ABCF1-204ENST00000468958 SOCS7O14512 581 aa18.29■□□□□ 0.52
ABCF1-204ENST00000468958 PRAM1Q96QH2 718 aa18.29■□□□□ 0.52
ABCF1-204ENST00000468958 COL22A1Q8NFW1 1626 aaPredicted RBP18.29■□□□□ 0.52
ABCF1-204ENST00000468958 PNPLA6Q8IY17 1366 aa18.29■□□□□ 0.52
ABCF1-204ENST00000468958 SOS2Q07890 1332 aaPredicted RBP18.28■□□□□ 0.52
ABCF1-204ENST00000468958 SPATA31A6Q5VVP1 1343 aa18.28■□□□□ 0.52
ABCF1-204ENST00000468958 SAFB2Q14151 953 aaKnown RBP eCLIP18.28■□□□□ 0.52
ABCF1-204ENST00000468958 POTEAQ6S8J7 498 aa18.27■□□□□ 0.52
ABCF1-204ENST00000468958 SIN3AQ96ST3 1273 aa18.27■□□□□ 0.52
ABCF1-204ENST00000468958 TRAK1Q9UPV9 953 aa18.27■□□□□ 0.52
ABCF1-204ENST00000468958 ESCO1Q5FWF5 840 aa18.26■□□□□ 0.51
ABCF1-204ENST00000468958 MARF1Q9Y4F3 1742 aaKnown RBP18.25■□□□□ 0.51
ABCF1-204ENST00000468958 TRPM1Q7Z4N2 1603 aa18.24■□□□□ 0.51
ABCF1-204ENST00000468958 LRRC59Q96AG4 307 aaKnown RBP18.24■□□□□ 0.51
ABCF1-204ENST00000468958 STAC3Q96MF2 364 aa18.24■□□□□ 0.51
ABCF1-204ENST00000468958 NUTM2BA6NNL0 878 aaPredicted RBP18.23■□□□□ 0.51
ABCF1-204ENST00000468958 NUTM2EB1AL46 878 aaPredicted RBP18.23■□□□□ 0.51
ABCF1-204ENST00000468958 NUTM2AQ8IVF1 878 aaPredicted RBP18.23■□□□□ 0.51
ABCF1-204ENST00000468958 XPCQ01831 940 aaPredicted RBP18.22■□□□□ 0.51
ABCF1-204ENST00000468958 FOXO3O43524 673 aa18.21■□□□□ 0.51
ABCF1-204ENST00000468958 NBPF1Q3BBV0 1214 aa18.21■□□□□ 0.51
ABCF1-204ENST00000468958 HIRIP3Q9BW71 556 aaPredicted RBP18.21■□□□□ 0.51
ABCF1-204ENST00000468958 ABCA3Q99758 1704 aa18.2■□□□□ 0.5
ABCF1-204ENST00000468958 TRPM3Q9HCF6 1732 aaPredicted RBP18.2■□□□□ 0.5
ABCF1-204ENST00000468958 L3MBTL2Q969R5 705 aa18.2■□□□□ 0.5
ABCF1-204ENST00000468958 POGKQ9P215 609 aa18.2■□□□□ 0.5
ABCF1-204ENST00000468958 MINK1Q8N4C8 1332 aaPredicted RBP18.2■□□□□ 0.5
ABCF1-204ENST00000468958 NPHP3Q7Z494 1330 aa18.19■□□□□ 0.5
ABCF1-204ENST00000468958 PRR36Q9H6K5 1346 aa18.19■□□□□ 0.5
ABCF1-204ENST00000468958 TOPAZ1Q8N9V7 1692 aa18.18■□□□□ 0.5
ABCF1-204ENST00000468958 TULP4Q9NRJ4 1543 aa18.18■□□□□ 0.5
ABCF1-204ENST00000468958 ITSN1Q15811 1721 aa18.18■□□□□ 0.5
ABCF1-204ENST00000468958 KCNA4P22459 653 aa18.18■□□□□ 0.5
ABCF1-204ENST00000468958 QRICH2Q9H0J4 1663 aa18.18■□□□□ 0.5
ABCF1-204ENST00000468958 MEX3CQ5U5Q3 659 aaKnown RBP18.17■□□□□ 0.5
ABCF1-204ENST00000468958 PCGF6Q9BYE7 350 aa18.17■□□□□ 0.5
ABCF1-204ENST00000468958 ANKARQ7Z5J8 1434 aa18.16■□□□□ 0.5
ABCF1-204ENST00000468958 NEUROD1Q13562 356 aa18.16■□□□□ 0.5
ABCF1-204ENST00000468958 ALS2Q96Q42 1657 aa18.15■□□□□ 0.5
ABCF1-204ENST00000468958 PHF8Q9UPP1 1060 aa18.15■□□□□ 0.5
ABCF1-204ENST00000468958 ATP7BP35670 1465 aa18.14■□□□□ 0.5
ABCF1-204ENST00000468958 CRYBG1Q9Y4K1 1723 aa18.14■□□□□ 0.49
ABCF1-204ENST00000468958 WASLO00401 505 aaPredicted RBP18.13■□□□□ 0.49
ABCF1-204ENST00000468958 PMFBP1Q8TBY8 1022 aa18.13■□□□□ 0.49
ABCF1-204ENST00000468958 AFF2P51816 1311 aa18.13■□□□□ 0.49
ABCF1-204ENST00000468958 ADAMTS2O95450 1211 aa18.12■□□□□ 0.49
ABCF1-204ENST00000468958 KRT28Q7Z3Y7 464 aa18.12■□□□□ 0.49
ABCF1-204ENST00000468958 SPATA31A3Q5VYP0 1347 aa18.12■□□□□ 0.49
ABCF1-204ENST00000468958 C8orf37Q96NL8 207 aa18.11■□□□□ 0.49
ABCF1-204ENST00000468958 TNS3Q68CZ2 1445 aa18.1■□□□□ 0.49
ABCF1-204ENST00000468958 NBPF8Q3BBV2 869 aa18.09■□□□□ 0.49
ABCF1-204ENST00000468958 ZNF772Q68DY9 489 aaPredicted RBP18.08■□□□□ 0.48
ABCF1-204ENST00000468958 PLCH1Q4KWH8 1693 aa18.08■□□□□ 0.48
ABCF1-204ENST00000468958 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.07■□□□□ 0.48
ABCF1-204ENST00000468958 SBNO1A3KN83 1393 aa18.06■□□□□ 0.48
ABCF1-204ENST00000468958 CDK19Q9BWU1 502 aa18.06■□□□□ 0.48
ABCF1-204ENST00000468958 EIF3AQ14152 1382 aaKnown RBP18.05■□□□□ 0.48
ABCF1-204ENST00000468958 NUDT16Q96DE0 195 aaKnown RBP18.05■□□□□ 0.48
ABCF1-204ENST00000468958 CABLES1Q8TDN4 633 aa18.04■□□□□ 0.48
ABCF1-204ENST00000468958 CENPJQ9HC77 1338 aaPredicted RBP18.03■□□□□ 0.48
ABCF1-204ENST00000468958 BCL9LQ86UU0 1499 aa18.03■□□□□ 0.48
ABCF1-204ENST00000468958 PHRF1Q9P1Y6 1649 aaKnown RBP18.03■□□□□ 0.48
ABCF1-204ENST00000468958 PSME1Q06323 249 aa18.03■□□□□ 0.48
ABCF1-204ENST00000468958 NGLY1Q96IV0 654 aa18.03■□□□□ 0.48
ABCF1-204ENST00000468958 FNBP4Q8N3X1 1017 aaPredicted RBP18.02■□□□□ 0.48
ABCF1-204ENST00000468958 CDK12Q9NYV4 1490 aaPredicted RBP18.01■□□□□ 0.47
ABCF1-204ENST00000468958 CLSPNQ9HAW4 1339 aa18.01■□□□□ 0.47
ABCF1-204ENST00000468958 NRAPQ86VF7 1730 aa18.01■□□□□ 0.47
ABCF1-204ENST00000468958 NWD2Q9ULI1 1742 aa18.01■□□□□ 0.47
ABCF1-204ENST00000468958 RGS12O14924 1447 aa18.01■□□□□ 0.47
ABCF1-204ENST00000468958 PLEKHG5O94827 1062 aa18.01■□□□□ 0.47
ABCF1-204ENST00000468958 QTRT2Q9H974 415 aaKnown RBP18.01■□□□□ 0.47
ABCF1-204ENST00000468958 SLIT2O94813 1529 aa18.01■□□□□ 0.47
ABCF1-204ENST00000468958 ROCK2O75116 1388 aaKnown RBP18.01■□□□□ 0.47
ABCF1-204ENST00000468958 GPRASP1Q5JY77 1395 aa18.01■□□□□ 0.47
ABCF1-204ENST00000468958 ATRNO75882 1429 aa18■□□□□ 0.47
ABCF1-204ENST00000468958 USP21Q9UK80 565 aa18■□□□□ 0.47
ABCF1-204ENST00000468958 RALGAPBQ86X10 1494 aa18■□□□□ 0.47
ABCF1-204ENST00000468958 RXRBP28702 533 aa17.99■□□□□ 0.47
ABCF1-204ENST00000468958 POLR3AO14802 1390 aaPredicted RBP17.99■□□□□ 0.47
ABCF1-204ENST00000468958 GLI3P10071 1580 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms