RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 NALCNQ8IZF0 1738 aa15.31■□□□□ 0.04
SSR3-205ENST00000467789 MST1RQ04912 1400 aa15.3■□□□□ 0.04
SSR3-205ENST00000467789 RGL3Q3MIN7 710 aa15.3■□□□□ 0.04
SSR3-205ENST00000467789 BRINP3Q76B58 766 aa15.29■□□□□ 0.04
SSR3-205ENST00000467789 ADGRF5Q8IZF2 1346 aa15.28■□□□□ 0.04
SSR3-205ENST00000467789 ASXL1Q8IXJ9 1541 aa15.27■□□□□ 0.04
SSR3-205ENST00000467789 PIK3C2GO75747 1445 aa15.27■□□□□ 0.04
SSR3-205ENST00000467789 ROBO2Q9HCK4 1378 aa15.27■□□□□ 0.04
SSR3-205ENST00000467789 SPATA31A6Q5VVP1 1343 aa15.27■□□□□ 0.04
SSR3-205ENST00000467789 TECPR2O15040 1411 aa15.26■□□□□ 0.03
SSR3-205ENST00000467789 SHPRHQ149N8 1683 aa15.26■□□□□ 0.03
SSR3-205ENST00000467789 MYOM2P54296 1465 aa15.26■□□□□ 0.03
SSR3-205ENST00000467789 LAMC1P11047 1609 aa15.25■□□□□ 0.03
SSR3-205ENST00000467789 NHSL1Q5SYE7 1610 aa15.25■□□□□ 0.03
SSR3-205ENST00000467789 DSG3P32926 999 aa15.25■□□□□ 0.03
SSR3-205ENST00000467789 KNDC1Q76NI1 1749 aa15.24■□□□□ 0.03
SSR3-205ENST00000467789 NRXN1Q9ULB1 1477 aa15.24■□□□□ 0.03
SSR3-205ENST00000467789 LRPPRCP42704 1394 aaKnown RBP15.24■□□□□ 0.03
SSR3-205ENST00000467789 ABCC11Q96J66 1382 aa15.24■□□□□ 0.03
SSR3-205ENST00000467789 C1orf167Q5SNV9 1468 aa15.23■□□□□ 0.03
SSR3-205ENST00000467789 STAC3Q96MF2 364 aa15.23■□□□□ 0.03
SSR3-205ENST00000467789 CDC42BPGQ6DT37 1551 aa15.23■□□□□ 0.03
SSR3-205ENST00000467789 LRRC59Q96AG4 307 aaKnown RBP15.22■□□□□ 0.03
SSR3-205ENST00000467789 SIRT1Q96EB6 747 aa15.21■□□□□ 0.03
SSR3-205ENST00000467789 C14orf93Q9H972 538 aaKnown RBP15.21■□□□□ 0.03
SSR3-205ENST00000467789 RGS17Q9UGC6 210 aaPredicted RBP15.21■□□□□ 0.03
SSR3-205ENST00000467789 POLA2Q14181 598 aa15.2■□□□□ 0.02
SSR3-205ENST00000467789 YTHDC2Q9H6S0 1430 aaKnown RBP15.19■□□□□ 0.02
SSR3-205ENST00000467789 DHX57Q6P158 1386 aaKnown RBP15.19■□□□□ 0.02
SSR3-205ENST00000467789 TMEM132EQ6IEE7 984 aa15.17■□□□□ 0.02
SSR3-205ENST00000467789 STK26Q9P289 416 aa15.17■□□□□ 0.02
SSR3-205ENST00000467789 MEX3CQ5U5Q3 659 aaKnown RBP15.16■□□□□ 0.02
SSR3-205ENST00000467789 LRP6O75581 1613 aa15.16■□□□□ 0.02
SSR3-205ENST00000467789 SOS2Q07890 1332 aaPredicted RBP15.15■□□□□ 0.02
SSR3-205ENST00000467789 DLC1Q96QB1 1528 aa15.14■□□□□ 0.01
SSR3-205ENST00000467789 ABCB7O75027 752 aa15.14■□□□□ 0.01
SSR3-205ENST00000467789 CFAP70Q5T0N1 1121 aa15.14■□□□□ 0.01
SSR3-205ENST00000467789 ZNF772Q68DY9 489 aaPredicted RBP15.14■□□□□ 0.01
SSR3-205ENST00000467789 WAPLQ7Z5K2 1190 aa15.14■□□□□ 0.01
SSR3-205ENST00000467789 ORAI2Q96SN7 254 aa15.14■□□□□ 0.01
SSR3-205ENST00000467789 NPHP3Q7Z494 1330 aa15.14■□□□□ 0.01
SSR3-205ENST00000467789 PNPLA6Q8IY17 1366 aa15.13■□□□□ 0.01
SSR3-205ENST00000467789 POTEAQ6S8J7 498 aa15.13■□□□□ 0.01
SSR3-205ENST00000467789 ZBTB12Q9Y330 459 aaPredicted RBP15.13■□□□□ 0.01
SSR3-205ENST00000467789 FMN2Q9NZ56 1722 aa15.12■□□□□ 0.01
SSR3-205ENST00000467789 DCAF11Q8TEB1 546 aa15.12■□□□□ 0.01
SSR3-205ENST00000467789 ESCO1Q5FWF5 840 aa15.11■□□□□ 0.01
SSR3-205ENST00000467789 DDX17Q92841 729 aaKnown RBP15.11■□□□□ 0.01
SSR3-205ENST00000467789 ADGRB1O14514 1584 aa15.11■□□□□ 0.01
SSR3-205ENST00000467789 PLEKHH1Q9ULM0 1364 aa15.11■□□□□ 0.01
SSR3-205ENST00000467789 KIF1AQ12756 1690 aa15.1■□□□□ 0.01
SSR3-205ENST00000467789 NUTM2BA6NNL0 878 aaPredicted RBP15.09■□□□□ 0.01
SSR3-205ENST00000467789 NUTM2EB1AL46 878 aaPredicted RBP15.09■□□□□ 0.01
SSR3-205ENST00000467789 NUTM2AQ8IVF1 878 aaPredicted RBP15.09■□□□□ 0.01
SSR3-205ENST00000467789 COL22A1Q8NFW1 1626 aaPredicted RBP15.09■□□□□ 0.01
SSR3-205ENST00000467789 KDM2AQ9Y2K7 1162 aa15.08■□□□□ 0
SSR3-205ENST00000467789 PXDNQ92626 1479 aa15.08■□□□□ 0
SSR3-205ENST00000467789 ADGRB2O60241 1585 aa15.07■□□□□ 0
SSR3-205ENST00000467789 PRAM1Q96QH2 718 aa15.07■□□□□ 0
SSR3-205ENST00000467789 POGKQ9P215 609 aa15.07■□□□□ 0
SSR3-205ENST00000467789 FOXO3O43524 673 aa15.06■□□□□ 0
SSR3-205ENST00000467789 EIF3AQ14152 1382 aaKnown RBP15.05■□□□□ -0
SSR3-205ENST00000467789 ANKARQ7Z5J8 1434 aa15.05■□□□□ -0
SSR3-205ENST00000467789 KIAA1210Q9ULL0 1709 aa15.05■□□□□ -0
SSR3-205ENST00000467789 CDK12Q9NYV4 1490 aaPredicted RBP15.04■□□□□ -0
SSR3-205ENST00000467789 AFF2P51816 1311 aa15.04■□□□□ -0
SSR3-205ENST00000467789 NUTM2FA1L443 756 aa15.04■□□□□ -0
SSR3-205ENST00000467789 C8orf37Q96NL8 207 aa15.03■□□□□ -0
SSR3-205ENST00000467789 TRAK1Q9UPV9 953 aa15.03■□□□□ -0
SSR3-205ENST00000467789 RGPD8O14715 1765 aaPredicted RBP15.03■□□□□ -0
SSR3-205ENST00000467789 RXRBP28702 533 aa15.02■□□□□ -0
SSR3-205ENST00000467789 PHF8Q9UPP1 1060 aa15.02■□□□□ -0
SSR3-205ENST00000467789 PSME1Q06323 249 aa15.01□□□□□ -0.01
SSR3-205ENST00000467789 SAFB2Q14151 953 aaKnown RBP eCLIP15.01□□□□□ -0.01
SSR3-205ENST00000467789 NGLY1Q96IV0 654 aa15.01□□□□□ -0.01
SSR3-205ENST00000467789 ARHGEF28Q8N1W1 1705 aaKnown RBP15□□□□□ -0.01
SSR3-205ENST00000467789 MARF1Q9Y4F3 1742 aaKnown RBP15□□□□□ -0.01
SSR3-205ENST00000467789 SPATA31A3Q5VYP0 1347 aa15□□□□□ -0.01
SSR3-205ENST00000467789 KRT28Q7Z3Y7 464 aa15□□□□□ -0.01
SSR3-205ENST00000467789 TULP4Q9NRJ4 1543 aa14.99□□□□□ -0.01
SSR3-205ENST00000467789 ADAMTS2O95450 1211 aa14.99□□□□□ -0.01
SSR3-205ENST00000467789 USP32Q8NFA0 1604 aa14.99□□□□□ -0.01
SSR3-205ENST00000467789 SBNO1A3KN83 1393 aa14.98□□□□□ -0.01
SSR3-205ENST00000467789 RBM6P78332 1123 aaKnown RBP14.98□□□□□ -0.01
SSR3-205ENST00000467789 XPCQ01831 940 aaPredicted RBP14.98□□□□□ -0.01
SSR3-205ENST00000467789 FNBP4Q8N3X1 1017 aaPredicted RBP14.98□□□□□ -0.01
SSR3-205ENST00000467789 QTRT2Q9H974 415 aaKnown RBP14.98□□□□□ -0.01
SSR3-205ENST00000467789 TNS3Q68CZ2 1445 aa14.98□□□□□ -0.01
SSR3-205ENST00000467789 WASLO00401 505 aaPredicted RBP14.97□□□□□ -0.01
SSR3-205ENST00000467789 ARHGEF10O15013 1369 aa14.97□□□□□ -0.01
SSR3-205ENST00000467789 MINK1Q8N4C8 1332 aaPredicted RBP14.96□□□□□ -0.01
SSR3-205ENST00000467789 ITSN1Q15811 1721 aa14.96□□□□□ -0.01
SSR3-205ENST00000467789 USP21Q9UK80 565 aa14.96□□□□□ -0.01
SSR3-205ENST00000467789 HIRIP3Q9BW71 556 aaPredicted RBP14.95□□□□□ -0.02
SSR3-205ENST00000467789 TRPC5Q9UL62 973 aaPredicted RBP14.95□□□□□ -0.02
SSR3-205ENST00000467789 GPRASP1Q5JY77 1395 aa14.94□□□□□ -0.02
SSR3-205ENST00000467789 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.93□□□□□ -0.02
SSR3-205ENST00000467789 PMFBP1Q8TBY8 1022 aa14.92□□□□□ -0.02
SSR3-205ENST00000467789 ATRNO75882 1429 aa14.92□□□□□ -0.02
SSR3-205ENST00000467789 PRR36Q9H6K5 1346 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms