RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 FAM135BQ49AJ0 1406 aa9.61□□□□□ -0.87
SCAF4-204ENST00000467731 POGKQ9P215 609 aa9.6□□□□□ -0.87
SCAF4-204ENST00000467731 SBNO2Q9Y2G9 1366 aa9.59□□□□□ -0.87
SCAF4-204ENST00000467731 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.59□□□□□ -0.87
SCAF4-204ENST00000467731 C11orf95C9JLR9 678 aaPredicted RBP9.59□□□□□ -0.87
SCAF4-204ENST00000467731 SIRT1Q96EB6 747 aa9.59□□□□□ -0.87
SCAF4-204ENST00000467731 DISP3Q9P2K9 1392 aa9.58□□□□□ -0.88
SCAF4-204ENST00000467731 NKTRP30414 1462 aaKnown RBP9.58□□□□□ -0.88
SCAF4-204ENST00000467731 MINK1Q8N4C8 1332 aaPredicted RBP9.58□□□□□ -0.88
SCAF4-204ENST00000467731 ZNF335Q9H4Z2 1342 aaPredicted RBP9.58□□□□□ -0.88
SCAF4-204ENST00000467731 RBM33Q96EV2 1170 aaKnown RBP9.57□□□□□ -0.88
SCAF4-204ENST00000467731 WASHC2AQ641Q2 1341 aa9.57□□□□□ -0.88
SCAF4-204ENST00000467731 TULP4Q9NRJ4 1543 aa9.57□□□□□ -0.88
SCAF4-204ENST00000467731 NALCNQ8IZF0 1738 aa9.57□□□□□ -0.88
SCAF4-204ENST00000467731 TMF1P82094 1093 aa9.57□□□□□ -0.88
SCAF4-204ENST00000467731 KIF7Q2M1P5 1343 aa9.56□□□□□ -0.88
SCAF4-204ENST00000467731 XIRP1Q702N8 1843 aaKnown RBP9.55□□□□□ -0.88
SCAF4-204ENST00000467731 ADGRB2O60241 1585 aa9.55□□□□□ -0.88
SCAF4-204ENST00000467731 PROSER2Q86WR7 435 aaPredicted RBP9.55□□□□□ -0.88
SCAF4-204ENST00000467731 POLR3GLQ9BT43 218 aa9.55□□□□□ -0.88
SCAF4-204ENST00000467731 CCDC7Q96M83 1385 aa9.55□□□□□ -0.88
SCAF4-204ENST00000467731 CENPBP07199 599 aaPredicted RBP9.54□□□□□ -0.88
SCAF4-204ENST00000467731 EVC2Q86UK5 1308 aa9.54□□□□□ -0.88
SCAF4-204ENST00000467731 TMEM94Q12767 1356 aa9.54□□□□□ -0.88
SCAF4-204ENST00000467731 ADGRL3Q9HAR2 1447 aa9.53□□□□□ -0.88
SCAF4-204ENST00000467731 LRRC7Q96NW7 1537 aa9.53□□□□□ -0.88
SCAF4-204ENST00000467731 WASLO00401 505 aaPredicted RBP9.53□□□□□ -0.88
SCAF4-204ENST00000467731 C14orf37Q86TY3 774 aa9.53□□□□□ -0.88
SCAF4-204ENST00000467731 CDK19Q9BWU1 502 aa9.53□□□□□ -0.88
SCAF4-204ENST00000467731 CABP2Q9NPB3 220 aa9.53□□□□□ -0.88
SCAF4-204ENST00000467731 SRPK2P78362 688 aaKnown RBP9.52□□□□□ -0.88
SCAF4-204ENST00000467731 CDCA8Q53HL2 280 aa9.52□□□□□ -0.88
SCAF4-204ENST00000467731 MYOM1P52179 1685 aa9.52□□□□□ -0.89
SCAF4-204ENST00000467731 CDC42BPGQ6DT37 1551 aa9.52□□□□□ -0.89
SCAF4-204ENST00000467731 RGPD8O14715 1765 aaPredicted RBP9.52□□□□□ -0.89
SCAF4-204ENST00000467731 LTBP4Q8N2S1 1624 aa9.51□□□□□ -0.89
SCAF4-204ENST00000467731 FMN2Q9NZ56 1722 aa9.51□□□□□ -0.89
SCAF4-204ENST00000467731 NCOA3Q9Y6Q9 1424 aa9.51□□□□□ -0.89
SCAF4-204ENST00000467731 NUTM2FA1L443 756 aa9.51□□□□□ -0.89
SCAF4-204ENST00000467731 DDX10Q13206 875 aaKnown RBP9.5□□□□□ -0.89
SCAF4-204ENST00000467731 USP32Q8NFA0 1604 aa9.5□□□□□ -0.89
SCAF4-204ENST00000467731 ATP7BP35670 1465 aa9.5□□□□□ -0.89
SCAF4-204ENST00000467731 C19orf44Q9H6X5 657 aa9.5□□□□□ -0.89
SCAF4-204ENST00000467731 PUS7Q96PZ0 661 aaKnown RBP9.49□□□□□ -0.89
SCAF4-204ENST00000467731 ATAD2Q6PL18 1390 aa9.49□□□□□ -0.89
SCAF4-204ENST00000467731 PRR36Q9H6K5 1346 aa9.49□□□□□ -0.89
SCAF4-204ENST00000467731 ITSN1Q15811 1721 aa9.48□□□□□ -0.89
SCAF4-204ENST00000467731 TOPAZ1Q8N9V7 1692 aa9.48□□□□□ -0.89
SCAF4-204ENST00000467731 MSH6P52701 1360 aa9.48□□□□□ -0.89
SCAF4-204ENST00000467731 TMC1Q8TDI8 760 aa9.48□□□□□ -0.89
SCAF4-204ENST00000467731 NUDT16Q96DE0 195 aaKnown RBP9.48□□□□□ -0.89
SCAF4-204ENST00000467731 DCCP43146 1447 aa9.48□□□□□ -0.89
SCAF4-204ENST00000467731 SLC12A5Q9H2X9 1139 aa9.47□□□□□ -0.89
SCAF4-204ENST00000467731 PPIP5K1Q6PFW1 1433 aa9.47□□□□□ -0.89
SCAF4-204ENST00000467731 ATF3P18847 181 aa9.47□□□□□ -0.89
SCAF4-204ENST00000467731 CCDC61Q9Y6R9 512 aa9.47□□□□□ -0.89
SCAF4-204ENST00000467731 ANKARQ7Z5J8 1434 aa9.46□□□□□ -0.89
SCAF4-204ENST00000467731 CABP1Q9NZU7 370 aa9.46□□□□□ -0.89
SCAF4-204ENST00000467731 CADPS2Q86UW7 1296 aa9.45□□□□□ -0.9
SCAF4-204ENST00000467731 NINLQ9Y2I6 1382 aa9.45□□□□□ -0.9
SCAF4-204ENST00000467731 PANK3Q9H999 370 aa9.45□□□□□ -0.9
SCAF4-204ENST00000467731 MST1RQ04912 1400 aa9.45□□□□□ -0.9
SCAF4-204ENST00000467731 CD163L1Q9NR16 1453 aa9.45□□□□□ -0.9
SCAF4-204ENST00000467731 A0A1W2PP64 1363 aa9.44□□□□□ -0.9
SCAF4-204ENST00000467731 AKAP12Q02952 1782 aa9.44□□□□□ -0.9
SCAF4-204ENST00000467731 C1orf167Q5SNV9 1468 aa9.44□□□□□ -0.9
SCAF4-204ENST00000467731 ANKRD36BQ8N2N9 1353 aa9.44□□□□□ -0.9
SCAF4-204ENST00000467731 DIEXFQ68CQ4 756 aaKnown RBP9.44□□□□□ -0.9
SCAF4-204ENST00000467731 PMFBP1Q8TBY8 1022 aa9.44□□□□□ -0.9
SCAF4-204ENST00000467731 ESCO1Q5FWF5 840 aa9.43□□□□□ -0.9
SCAF4-204ENST00000467731 ORAI2Q96SN7 254 aa9.43□□□□□ -0.9
SCAF4-204ENST00000467731 TERF2IPQ9NYB0 399 aa9.42□□□□□ -0.9
SCAF4-204ENST00000467731 MON2Q7Z3U7 1717 aa9.42□□□□□ -0.9
SCAF4-204ENST00000467731 CPSF1Q10570 1443 aaKnown RBP9.42□□□□□ -0.9
SCAF4-204ENST00000467731 PLEKHG3A1L390 1219 aa9.42□□□□□ -0.9
SCAF4-204ENST00000467731 PER1O15534 1290 aaPredicted RBP9.42□□□□□ -0.9
SCAF4-204ENST00000467731 ACEP12821 1306 aa9.42□□□□□ -0.9
SCAF4-204ENST00000467731 CARD14Q9BXL6 1004 aa9.42□□□□□ -0.9
SCAF4-204ENST00000467731 PHF8Q9UPP1 1060 aa9.42□□□□□ -0.9
SCAF4-204ENST00000467731 KIF1AQ12756 1690 aa9.41□□□□□ -0.9
SCAF4-204ENST00000467731 HDGFL2Q7Z4V5 671 aaPredicted RBP9.41□□□□□ -0.9
SCAF4-204ENST00000467731 SLAIN2Q9P270 581 aa9.41□□□□□ -0.9
SCAF4-204ENST00000467731 POLR3AO14802 1390 aaPredicted RBP9.41□□□□□ -0.9
SCAF4-204ENST00000467731 NSD3Q9BZ95 1437 aa9.41□□□□□ -0.9
SCAF4-204ENST00000467731 EIF5BO60841 1220 aaKnown RBP9.41□□□□□ -0.9
SCAF4-204ENST00000467731 NGDNQ8NEJ9 315 aaKnown RBP9.41□□□□□ -0.9
SCAF4-204ENST00000467731 KTN1Q86UP2 1357 aaKnown RBP9.41□□□□□ -0.9
SCAF4-204ENST00000467731 NRKQ7Z2Y5 1582 aa9.4□□□□□ -0.9
SCAF4-204ENST00000467731 KNSTRNQ9Y448 316 aa9.4□□□□□ -0.9
SCAF4-204ENST00000467731 USP6P35125 1406 aa9.39□□□□□ -0.91
SCAF4-204ENST00000467731 FOXO3O43524 673 aa9.39□□□□□ -0.91
SCAF4-204ENST00000467731 CNGB1Q14028 1251 aaPredicted RBP9.39□□□□□ -0.91
SCAF4-204ENST00000467731 BRINP3Q76B58 766 aa9.39□□□□□ -0.91
SCAF4-204ENST00000467731 ZNF692Q9BU19 519 aaPredicted RBP9.39□□□□□ -0.91
SCAF4-204ENST00000467731 IQSEC2Q5JU85 1478 aa9.39□□□□□ -0.91
SCAF4-204ENST00000467731 CERKQ8TCT0 537 aa9.39□□□□□ -0.91
SCAF4-204ENST00000467731 KIF20BQ96Q89 1820 aa9.38□□□□□ -0.91
SCAF4-204ENST00000467731 EDC4Q6P2E9 1401 aaKnown RBP9.38□□□□□ -0.91
SCAF4-204ENST00000467731 ROBO1Q9Y6N7 1651 aa9.38□□□□□ -0.91
SCAF4-204ENST00000467731 AMER1Q5JTC6 1135 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms