RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 USP21Q9UK80 565 aa23.63■■□□□ 1.37
TSSC4-208ENST00000467308 TRPC5Q9UL62 973 aaPredicted RBP23.62■■□□□ 1.37
TSSC4-208ENST00000467308 ATAD2Q6PL18 1390 aa23.61■■□□□ 1.37
TSSC4-208ENST00000467308 NPHP3Q7Z494 1330 aa23.6■■□□□ 1.37
TSSC4-208ENST00000467308 MYOM2P54296 1465 aa23.58■■□□□ 1.37
TSSC4-208ENST00000467308 ATRNO75882 1429 aa23.58■■□□□ 1.36
TSSC4-208ENST00000467308 PXDNQ92626 1479 aa23.57■■□□□ 1.36
TSSC4-208ENST00000467308 ESCO1Q5FWF5 840 aa23.57■■□□□ 1.36
TSSC4-208ENST00000467308 SRCAPQ6ZRS2 3230 aa23.56■■□□□ 1.36
TSSC4-208ENST00000467308 TECPR2O15040 1411 aa23.56■■□□□ 1.36
TSSC4-208ENST00000467308 MARF1Q9Y4F3 1742 aaKnown RBP23.55■■□□□ 1.36
TSSC4-208ENST00000467308 LRPPRCP42704 1394 aaKnown RBP23.54■■□□□ 1.36
TSSC4-208ENST00000467308 EP400Q96L91 3159 aa23.53■■□□□ 1.36
TSSC4-208ENST00000467308 CCDC144AA2RUR9 1427 aa23.52■■□□□ 1.36
TSSC4-208ENST00000467308 BCL9LQ86UU0 1499 aa23.52■■□□□ 1.36
TSSC4-208ENST00000467308 ADGRF5Q8IZF2 1346 aa23.52■■□□□ 1.36
TSSC4-208ENST00000467308 ANKRD30BQ9BXX2 1392 aa23.52■■□□□ 1.36
TSSC4-208ENST00000467308 FOXO3O43524 673 aa23.51■■□□□ 1.35
TSSC4-208ENST00000467308 SPATA31E1Q6ZUB1 1445 aa23.5■■□□□ 1.35
TSSC4-208ENST00000467308 KNDC1Q76NI1 1749 aa23.5■■□□□ 1.35
TSSC4-208ENST00000467308 IFT172Q9UG01 1749 aa23.5■■□□□ 1.35
TSSC4-208ENST00000467308 ABCC11Q96J66 1382 aa23.5■■□□□ 1.35
TSSC4-208ENST00000467308 FOXD1Q16676 465 aa23.49■■□□□ 1.35
TSSC4-208ENST00000467308 WAPLQ7Z5K2 1190 aa23.48■■□□□ 1.35
TSSC4-208ENST00000467308 XPCQ01831 940 aaPredicted RBP23.47■■□□□ 1.35
TSSC4-208ENST00000467308 CCDC125Q86Z20 511 aa23.47■■□□□ 1.35
TSSC4-208ENST00000467308 STK26Q9P289 416 aa23.47■■□□□ 1.35
TSSC4-208ENST00000467308 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.47■■□□□ 1.35
TSSC4-208ENST00000467308 RGL3Q3MIN7 710 aa23.46■■□□□ 1.35
TSSC4-208ENST00000467308 FMN2Q9NZ56 1722 aa23.45■■□□□ 1.34
TSSC4-208ENST00000467308 KIF1AQ12756 1690 aa23.45■■□□□ 1.34
TSSC4-208ENST00000467308 PIK3C2GO75747 1445 aa23.45■■□□□ 1.34
TSSC4-208ENST00000467308 GJD4Q96KN9 370 aaPredicted RBP23.45■■□□□ 1.34
TSSC4-208ENST00000467308 PLEKHH1Q9ULM0 1364 aa23.43■■□□□ 1.34
TSSC4-208ENST00000467308 NUTM2FA1L443 756 aa23.43■■□□□ 1.34
TSSC4-208ENST00000467308 SPATA31A3Q5VYP0 1347 aa23.42■■□□□ 1.34
TSSC4-208ENST00000467308 TMEM132EQ6IEE7 984 aa23.42■■□□□ 1.34
TSSC4-208ENST00000467308 YTHDC2Q9H6S0 1430 aaKnown RBP23.42■■□□□ 1.34
TSSC4-208ENST00000467308 SIRT1Q96EB6 747 aa23.41■■□□□ 1.34
TSSC4-208ENST00000467308 MPHOSPH9Q99550 1183 aa23.41■■□□□ 1.34
TSSC4-208ENST00000467308 ZRANB1Q9UGI0 708 aa23.41■■□□□ 1.34
TSSC4-208ENST00000467308 SLIT2O94813 1529 aa23.41■■□□□ 1.34
TSSC4-208ENST00000467308 UNC5CLQ8IV45 518 aa23.4■■□□□ 1.34
TSSC4-208ENST00000467308 USP32Q8NFA0 1604 aa23.37■■□□□ 1.33
TSSC4-208ENST00000467308 RALGAPBQ86X10 1494 aa23.37■■□□□ 1.33
TSSC4-208ENST00000467308 GLI3P10071 1580 aa23.37■■□□□ 1.33
TSSC4-208ENST00000467308 KRT28Q7Z3Y7 464 aa23.36■■□□□ 1.33
TSSC4-208ENST00000467308 C14orf93Q9H972 538 aaKnown RBP23.35■■□□□ 1.33
TSSC4-208ENST00000467308 RGPD8O14715 1765 aaPredicted RBP23.35■■□□□ 1.33
TSSC4-208ENST00000467308 NRXN1Q9ULB1 1477 aa23.34■■□□□ 1.33
TSSC4-208ENST00000467308 ACIN1Q9UKV3 1341 aaKnown RBP23.33■■□□□ 1.33
TSSC4-208ENST00000467308 TNS3Q68CZ2 1445 aa23.33■■□□□ 1.33
TSSC4-208ENST00000467308 PSME1Q06323 249 aa23.33■■□□□ 1.33
TSSC4-208ENST00000467308 BLMP54132 1417 aaPredicted RBP23.33■■□□□ 1.32
TSSC4-208ENST00000467308 PHF8Q9UPP1 1060 aa23.32■■□□□ 1.32
TSSC4-208ENST00000467308 DHX57Q6P158 1386 aaKnown RBP23.31■■□□□ 1.32
TSSC4-208ENST00000467308 BRWD3Q6RI45 1802 aa23.31■■□□□ 1.32
TSSC4-208ENST00000467308 NWD2Q9ULI1 1742 aa23.3■■□□□ 1.32
TSSC4-208ENST00000467308 SBNO1A3KN83 1393 aa23.3■■□□□ 1.32
TSSC4-208ENST00000467308 HAP1P54257 671 aaPredicted RBP23.28■■□□□ 1.32
TSSC4-208ENST00000467308 VPS72Q15906 364 aa23.28■■□□□ 1.32
TSSC4-208ENST00000467308 ARHGEF10O15013 1369 aa23.27■■□□□ 1.32
TSSC4-208ENST00000467308 CFAP70Q5T0N1 1121 aa23.27■■□□□ 1.32
TSSC4-208ENST00000467308 PLCH1Q4KWH8 1693 aa23.27■■□□□ 1.32
TSSC4-208ENST00000467308 ABCA3Q99758 1704 aa23.27■■□□□ 1.32
TSSC4-208ENST00000467308 DLC1Q96QB1 1528 aa23.26■■□□□ 1.31
TSSC4-208ENST00000467308 ONECUT3O60422 494 aaPredicted RBP23.25■■□□□ 1.31
TSSC4-208ENST00000467308 SEPT12Q8IYM1 358 aa23.25■■□□□ 1.31
TSSC4-208ENST00000467308 CABLES1Q8TDN4 633 aa23.25■■□□□ 1.31
TSSC4-208ENST00000467308 PRAM1Q96QH2 718 aa23.25■■□□□ 1.31
TSSC4-208ENST00000467308 ANKARQ7Z5J8 1434 aa23.25■■□□□ 1.31
TSSC4-208ENST00000467308 ADGRB2O60241 1585 aa23.23■■□□□ 1.31
TSSC4-208ENST00000467308 SF3B2Q13435 895 aaKnown RBP23.21■■□□□ 1.31
TSSC4-208ENST00000467308 SAFB2Q14151 953 aaKnown RBP eCLIP23.21■■□□□ 1.31
TSSC4-208ENST00000467308 LMOD2Q6P5Q4 547 aa23.21■■□□□ 1.31
TSSC4-208ENST00000467308 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
TSSC4-208ENST00000467308 POGKQ9P215 609 aa23.2■■□□□ 1.3
TSSC4-208ENST00000467308 KRT27Q7Z3Y8 459 aa23.19■■□□□ 1.3
TSSC4-208ENST00000467308 DEFB132Q7Z7B7 95 aa23.19■■□□□ 1.3
TSSC4-208ENST00000467308 CCDC9Q9Y3X0 531 aaKnown RBP23.19■■□□□ 1.3
TSSC4-208ENST00000467308 FAM83GA6ND36 823 aa23.18■■□□□ 1.3
TSSC4-208ENST00000467308 TRPM3Q9HCF6 1732 aaPredicted RBP23.18■■□□□ 1.3
TSSC4-208ENST00000467308 ADGRB1O14514 1584 aa23.18■■□□□ 1.3
TSSC4-208ENST00000467308 PMFBP1Q8TBY8 1022 aa23.17■■□□□ 1.3
TSSC4-208ENST00000467308 NRAPQ86VF7 1730 aa23.16■■□□□ 1.3
TSSC4-208ENST00000467308 PLEKHG5O94827 1062 aa23.16■■□□□ 1.3
TSSC4-208ENST00000467308 EIF3AQ14152 1382 aaKnown RBP23.15■■□□□ 1.3
TSSC4-208ENST00000467308 ALS2Q96Q42 1657 aa23.15■■□□□ 1.3
TSSC4-208ENST00000467308 GPRASP1Q5JY77 1395 aa23.14■■□□□ 1.29
TSSC4-208ENST00000467308 COL14A1Q05707 1796 aaKnown RBP23.13■■□□□ 1.29
TSSC4-208ENST00000467308 TULP4Q9NRJ4 1543 aa23.12■■□□□ 1.29
TSSC4-208ENST00000467308 BTG4Q9NY30 223 aa23.11■■□□□ 1.29
TSSC4-208ENST00000467308 TRAK1Q9UPV9 953 aa23.11■■□□□ 1.29
TSSC4-208ENST00000467308 LRP5O75197 1615 aa23.11■■□□□ 1.29
TSSC4-208ENST00000467308 HIRIP3Q9BW71 556 aaPredicted RBP23.1■■□□□ 1.29
TSSC4-208ENST00000467308 FAM98CQ17RN3 349 aaKnown RBP23.09■■□□□ 1.29
TSSC4-208ENST00000467308 PRR36Q9H6K5 1346 aa23.08■■□□□ 1.29
TSSC4-208ENST00000467308 A0A0G2JS52 829 aa23.08■■□□□ 1.29
TSSC4-208ENST00000467308 BAG6P46379 1132 aa23.08■■□□□ 1.29
TSSC4-208ENST00000467308 MYT1Q01538 1121 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 222.7 ms