RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 SIRT1Q96EB6 747 aa28.4■■■□□ 2.14
GMDS-203ENST00000467288 LRP6O75581 1613 aa28.4■■■□□ 2.14
GMDS-203ENST00000467288 DHX57Q6P158 1386 aaKnown RBP28.39■■■□□ 2.14
GMDS-203ENST00000467288 DCAF11Q8TEB1 546 aa28.39■■■□□ 2.14
GMDS-203ENST00000467288 ZNF772Q68DY9 489 aaPredicted RBP28.38■■■□□ 2.13
GMDS-203ENST00000467288 NHSL1Q5SYE7 1610 aa28.38■■■□□ 2.13
GMDS-203ENST00000467288 PLEKHH1Q9ULM0 1364 aa28.37■■■□□ 2.13
GMDS-203ENST00000467288 CDC42BPGQ6DT37 1551 aa28.37■■■□□ 2.13
GMDS-203ENST00000467288 KDM2AQ9Y2K7 1162 aa28.37■■■□□ 2.13
GMDS-203ENST00000467288 NUTM2BA6NNL0 878 aaPredicted RBP28.36■■■□□ 2.13
GMDS-203ENST00000467288 NUTM2EB1AL46 878 aaPredicted RBP28.36■■■□□ 2.13
GMDS-203ENST00000467288 NUTM2AQ8IVF1 878 aaPredicted RBP28.36■■■□□ 2.13
GMDS-203ENST00000467288 ADGRB1O14514 1584 aa28.33■■■□□ 2.13
GMDS-203ENST00000467288 ORAI2Q96SN7 254 aa28.32■■■□□ 2.12
GMDS-203ENST00000467288 DDX17Q92841 729 aaKnown RBP28.31■■■□□ 2.12
GMDS-203ENST00000467288 LRRC59Q96AG4 307 aaKnown RBP28.31■■■□□ 2.12
GMDS-203ENST00000467288 SHPRHQ149N8 1683 aa28.31■■■□□ 2.12
GMDS-203ENST00000467288 DLC1Q96QB1 1528 aa28.29■■■□□ 2.12
GMDS-203ENST00000467288 RXRBP28702 533 aa28.26■■■□□ 2.11
GMDS-203ENST00000467288 PRAM1Q96QH2 718 aa28.25■■■□□ 2.11
GMDS-203ENST00000467288 SOS2Q07890 1332 aaPredicted RBP28.23■■■□□ 2.11
GMDS-203ENST00000467288 FMN2Q9NZ56 1722 aa28.23■■■□□ 2.11
GMDS-203ENST00000467288 ESCO1Q5FWF5 840 aa28.22■■■□□ 2.11
GMDS-203ENST00000467288 AFF2P51816 1311 aa28.21■■■□□ 2.11
GMDS-203ENST00000467288 TRAK1Q9UPV9 953 aa28.21■■■□□ 2.11
GMDS-203ENST00000467288 POGKQ9P215 609 aa28.2■■■□□ 2.1
GMDS-203ENST00000467288 NUTM2FA1L443 756 aa28.19■■■□□ 2.1
GMDS-203ENST00000467288 UPF1Q92900 1129 aaKnown RBP eCLIP28.19■■■□□ 2.13e-10■■■■■ 36
GMDS-203ENST00000467288 PNPLA6Q8IY17 1366 aa28.19■■■□□ 2.1
GMDS-203ENST00000467288 SAFB2Q14151 953 aaKnown RBP eCLIP28.18■■■□□ 2.1
GMDS-203ENST00000467288 TRIM26Q12899 539 aaPredicted RBP28.17■■■□□ 2.1
GMDS-203ENST00000467288 C8orf37Q96NL8 207 aa28.17■■■□□ 2.1
GMDS-203ENST00000467288 NPHP3Q7Z494 1330 aa28.17■■■□□ 2.1
GMDS-203ENST00000467288 KIAA1210Q9ULL0 1709 aa28.15■■■□□ 2.1
GMDS-203ENST00000467288 SIN3AQ96ST3 1273 aa28.14■■■□□ 2.1
GMDS-203ENST00000467288 QTRT2Q9H974 415 aaKnown RBP28.14■■■□□ 2.1
GMDS-203ENST00000467288 ADGRB2O60241 1585 aa28.14■■■□□ 2.1
GMDS-203ENST00000467288 FOXO3O43524 673 aa28.13■■■□□ 2.09
GMDS-203ENST00000467288 PXDNQ92626 1479 aa28.13■■■□□ 2.09
GMDS-203ENST00000467288 ADAMTS2O95450 1211 aa28.12■■■□□ 2.09
GMDS-203ENST00000467288 KIF1AQ12756 1690 aa28.1■■■□□ 2.09
GMDS-203ENST00000467288 L3MBTL2Q969R5 705 aa28.1■■■□□ 2.09
GMDS-203ENST00000467288 NGLY1Q96IV0 654 aa28.1■■■□□ 2.09
GMDS-203ENST00000467288 ARHGEF28Q8N1W1 1705 aaKnown RBP28.09■■■□□ 2.09
GMDS-203ENST00000467288 ANKARQ7Z5J8 1434 aa28.08■■■□□ 2.09
GMDS-203ENST00000467288 RGPD8O14715 1765 aaPredicted RBP28.07■■■□□ 2.08
GMDS-203ENST00000467288 RBM6P78332 1123 aaKnown RBP28.07■■■□□ 2.08
GMDS-203ENST00000467288 NBPF1Q3BBV0 1214 aa28.07■■■□□ 2.08
GMDS-203ENST00000467288 MINK1Q8N4C8 1332 aaPredicted RBP28.07■■■□□ 2.08
GMDS-203ENST00000467288 XPCQ01831 940 aaPredicted RBP28.06■■■□□ 2.08
GMDS-203ENST00000467288 HIRIP3Q9BW71 556 aaPredicted RBP28.06■■■□□ 2.08
GMDS-203ENST00000467288 PHF8Q9UPP1 1060 aa28.06■■■□□ 2.08
GMDS-203ENST00000467288 CDK12Q9NYV4 1490 aaPredicted RBP28.06■■■□□ 2.08
GMDS-203ENST00000467288 NEUROD1Q13562 356 aa28.05■■■□□ 2.08
GMDS-203ENST00000467288 USP32Q8NFA0 1604 aa28.05■■■□□ 2.08
GMDS-203ENST00000467288 COL22A1Q8NFW1 1626 aaPredicted RBP28.05■■■□□ 2.08
GMDS-203ENST00000467288 WASLO00401 505 aaPredicted RBP28.03■■■□□ 2.08
GMDS-203ENST00000467288 EIF3AQ14152 1382 aaKnown RBP28.02■■■□□ 2.08
GMDS-203ENST00000467288 KRT28Q7Z3Y7 464 aa28.01■■■□□ 2.07
GMDS-203ENST00000467288 TULP4Q9NRJ4 1543 aa28■■■□□ 2.07
GMDS-203ENST00000467288 PRR36Q9H6K5 1346 aa27.99■■■□□ 2.07
GMDS-203ENST00000467288 SPATA31A3Q5VYP0 1347 aa27.98■■■□□ 2.07
GMDS-203ENST00000467288 USP21Q9UK80 565 aa27.98■■■□□ 2.07
GMDS-203ENST00000467288 RGS12O14924 1447 aa27.96■■■□□ 2.07
GMDS-203ENST00000467288 FNBP4Q8N3X1 1017 aaPredicted RBP27.96■■■□□ 2.07
GMDS-203ENST00000467288 PSME1Q06323 249 aa27.95■■■□□ 2.06
GMDS-203ENST00000467288 PMFBP1Q8TBY8 1022 aa27.95■■■□□ 2.06
GMDS-203ENST00000467288 TRPM1Q7Z4N2 1603 aa27.93■■■□□ 2.06
GMDS-203ENST00000467288 TRPC5Q9UL62 973 aaPredicted RBP27.93■■■□□ 2.06
GMDS-203ENST00000467288 SBNO1A3KN83 1393 aa27.93■■■□□ 2.06
GMDS-203ENST00000467288 TNS3Q68CZ2 1445 aa27.92■■■□□ 2.06
GMDS-203ENST00000467288 ATP7BP35670 1465 aa27.9■■■□□ 2.06
GMDS-203ENST00000467288 CDK19Q9BWU1 502 aa27.9■■■□□ 2.06
GMDS-203ENST00000467288 NUDT16Q96DE0 195 aaKnown RBP27.89■■■□□ 2.06
GMDS-203ENST00000467288 CENPJQ9HC77 1338 aaPredicted RBP27.89■■■□□ 2.05
GMDS-203ENST00000467288 NBPF8Q3BBV2 869 aa27.86■■■□□ 2.05
GMDS-203ENST00000467288 ITSN1Q15811 1721 aa27.85■■■□□ 2.05
GMDS-203ENST00000467288 ARHGEF10O15013 1369 aa27.85■■■□□ 2.05
GMDS-203ENST00000467288 ROCK2O75116 1388 aaKnown RBP27.85■■■□□ 2.05
GMDS-203ENST00000467288 GPRASP1Q5JY77 1395 aa27.85■■■□□ 2.05
GMDS-203ENST00000467288 TRPM3Q9HCF6 1732 aaPredicted RBP27.84■■■□□ 2.05
GMDS-203ENST00000467288 MARF1Q9Y4F3 1742 aaKnown RBP27.84■■■□□ 2.05
GMDS-203ENST00000467288 NGDNQ8NEJ9 315 aaKnown RBP27.83■■■□□ 2.05
GMDS-203ENST00000467288 TONSLQ96HA7 1378 aa27.83■■■□□ 2.05
GMDS-203ENST00000467288 ATRNO75882 1429 aa27.82■■■□□ 2.04
GMDS-203ENST00000467288 QRICH2Q9H0J4 1663 aa27.81■■■□□ 2.04
GMDS-203ENST00000467288 CCDC61Q9Y6R9 512 aa27.81■■■□□ 2.04
GMDS-203ENST00000467288 TOPAZ1Q8N9V7 1692 aa27.81■■■□□ 2.04
GMDS-203ENST00000467288 LMOD2Q6P5Q4 547 aa27.8■■■□□ 2.04
GMDS-203ENST00000467288 BCL9LQ86UU0 1499 aa27.8■■■□□ 2.04
GMDS-203ENST00000467288 ATAD2Q6PL18 1390 aa27.79■■■□□ 2.04
GMDS-203ENST00000467288 ALS2Q96Q42 1657 aa27.78■■■□□ 2.04
GMDS-203ENST00000467288 PLEKHG3A1L390 1219 aa27.78■■■□□ 2.04
GMDS-203ENST00000467288 CABLES1Q8TDN4 633 aa27.78■■■□□ 2.04
GMDS-203ENST00000467288 POLR3AO14802 1390 aaPredicted RBP27.77■■■□□ 2.04
GMDS-203ENST00000467288 SRPK2P78362 688 aaKnown RBP27.76■■■□□ 2.03
GMDS-203ENST00000467288 GJD4Q96KN9 370 aaPredicted RBP27.76■■■□□ 2.03
GMDS-203ENST00000467288 HAP1P54257 671 aaPredicted RBP27.75■■■□□ 2.03
GMDS-203ENST00000467288 ABCA3Q99758 1704 aa27.75■■■□□ 2.03
GMDS-203ENST00000467288 ACEP12821 1306 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms