RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 GUCA2AQ02747 115 aa10.71□□□□□ -0.69
SMC4-207ENST00000467263 MINK1Q8N4C8 1332 aaPredicted RBP10.7□□□□□ -0.7
SMC4-207ENST00000467263 CD2BP2O95400 341 aaKnown RBP10.69□□□□□ -0.7
SMC4-207ENST00000467263 MMP16P51512 607 aa10.68□□□□□ -0.7
SMC4-207ENST00000467263 GRIPAP1Q4V328 841 aa10.68□□□□□ -0.7
SMC4-207ENST00000467263 REPIN1Q9BWE0 567 aaKnown RBP10.68□□□□□ -0.7
SMC4-207ENST00000467263 SYMPKQ92797 1274 aaKnown RBP10.67□□□□□ -0.7
SMC4-207ENST00000467263 HOXA2O43364 376 aa10.66□□□□□ -0.7
SMC4-207ENST00000467263 LMOD2Q6P5Q4 547 aa10.66□□□□□ -0.7
SMC4-207ENST00000467263 USB1Q9BQ65 265 aaKnown RBP10.66□□□□□ -0.7
SMC4-207ENST00000467263 FAM217BQ9NTX9 383 aaPredicted RBP10.66□□□□□ -0.7
SMC4-207ENST00000467263 DXOO77932 396 aaKnown RBP10.65□□□□□ -0.7
SMC4-207ENST00000467263 Q3C1V9 767 aa10.65□□□□□ -0.7
SMC4-207ENST00000467263 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMC4-207ENST00000467263 CYP4X1Q8N118 509 aa10.65□□□□□ -0.7
SMC4-207ENST00000467263 TRIM32Q13049 653 aa10.64□□□□□ -0.71
SMC4-207ENST00000467263 ZBTB24O43167 697 aaPredicted RBP10.63□□□□□ -0.71
SMC4-207ENST00000467263 TULP1O00294 542 aaPredicted RBP10.62□□□□□ -0.71
SMC4-207ENST00000467263 AVPP01185 164 aa10.62□□□□□ -0.71
SMC4-207ENST00000467263 GPCPD1Q9NPB8 672 aa10.62□□□□□ -0.71
SMC4-207ENST00000467263 CRIPAKQ8N1N5 446 aa10.61□□□□□ -0.71
SMC4-207ENST00000467263 WNT7AO00755 349 aa10.6□□□□□ -0.71
SMC4-207ENST00000467263 SMPD1P17405 629 aa10.6□□□□□ -0.71
SMC4-207ENST00000467263 USP46P62068 366 aa10.6□□□□□ -0.71
SMC4-207ENST00000467263 CCDC24Q8N4L8 307 aa10.6□□□□□ -0.71
SMC4-207ENST00000467263 MRGPRX2Q96LB1 330 aa10.6□□□□□ -0.71
SMC4-207ENST00000467263 J3QL48 77 aa10.59□□□□□ -0.71
SMC4-207ENST00000467263 CLCN1P35523 988 aa10.59□□□□□ -0.71
SMC4-207ENST00000467263 SKOR1P84550 965 aa10.59□□□□□ -0.71
SMC4-207ENST00000467263 GMPR2Q9P2T1 348 aaKnown RBP10.59□□□□□ -0.71
SMC4-207ENST00000467263 PCDHGC3Q9UN70 934 aa10.59□□□□□ -0.71
SMC4-207ENST00000467263 TTC24A2A3L6 582 aaPredicted RBP10.58□□□□□ -0.72
SMC4-207ENST00000467263 AXIN1O15169 862 aa10.57□□□□□ -0.72
SMC4-207ENST00000467263 PTCRAQ6ISU1 281 aaPredicted RBP10.56□□□□□ -0.72
SMC4-207ENST00000467263 SNIP1Q8TAD8 396 aaKnown RBP10.55□□□□□ -0.72
SMC4-207ENST00000467263 JUNDP17535 347 aa10.54□□□□□ -0.72
SMC4-207ENST00000467263 LCE2AQ5TA79 106 aaPredicted RBP10.54□□□□□ -0.72
SMC4-207ENST00000467263 NUTM1Q86Y26 1132 aa10.54□□□□□ -0.72
SMC4-207ENST00000467263 NDUFV2P19404 249 aa10.53□□□□□ -0.72
SMC4-207ENST00000467263 SSTR3P32745 418 aaPredicted RBP10.53□□□□□ -0.72
SMC4-207ENST00000467263 SMCPP49901 116 aaPredicted RBP10.53□□□□□ -0.72
SMC4-207ENST00000467263 RC3H1Q5TC82 1133 aaKnown RBP10.53□□□□□ -0.72
SMC4-207ENST00000467263 HPS1Q92902 700 aa10.53□□□□□ -0.72
SMC4-207ENST00000467263 FDX1P10109 184 aa10.52□□□□□ -0.73
SMC4-207ENST00000467263 BARGINQ6ZT62 677 aa10.52□□□□□ -0.73
SMC4-207ENST00000467263 KRI1Q8N9T8 703 aaKnown RBP10.52□□□□□ -0.73
SMC4-207ENST00000467263 SPIRE2Q8WWL2 714 aa10.52□□□□□ -0.73
SMC4-207ENST00000467263 ZMYND10O75800 440 aa10.51□□□□□ -0.73
SMC4-207ENST00000467263 CTC1Q2NKJ3 1217 aa10.51□□□□□ -0.73
SMC4-207ENST00000467263 MOXD2PA6NHM9 499 aa10.5□□□□□ -0.73
SMC4-207ENST00000467263 RETREG3Q86VR2 466 aa10.5□□□□□ -0.73
SMC4-207ENST00000467263 ZC3H15Q8WU90 426 aaKnown RBP10.5□□□□□ -0.73
SMC4-207ENST00000467263 C11orf95C9JLR9 678 aaPredicted RBP10.49□□□□□ -0.73
SMC4-207ENST00000467263 TREML4Q6UXN2 200 aa10.49□□□□□ -0.73
SMC4-207ENST00000467263 NUDT12Q9BQG2 462 aa10.49□□□□□ -0.73
SMC4-207ENST00000467263 C6orf229H3BNL8 230 aa10.48□□□□□ -0.73
SMC4-207ENST00000467263 SNRPBP14678 240 aaKnown RBP10.47□□□□□ -0.73
SMC4-207ENST00000467263 TTLL12Q14166 644 aaPredicted RBP10.47□□□□□ -0.73
SMC4-207ENST00000467263 ATP13A2Q9NQ11 1180 aa10.47□□□□□ -0.73
SMC4-207ENST00000467263 WNT7BP56706 349 aa10.46□□□□□ -0.73
SMC4-207ENST00000467263 GIGYF2Q6Y7W6 1299 aaKnown RBP10.46□□□□□ -0.73
SMC4-207ENST00000467263 AMHR2Q16671 573 aa10.45□□□□□ -0.74
SMC4-207ENST00000467263 SIAH2O43255 324 aa10.44□□□□□ -0.74
SMC4-207ENST00000467263 LCE2CQ5TA81 110 aa10.44□□□□□ -0.74
SMC4-207ENST00000467263 ALDH1A1P00352 501 aa10.43□□□□□ -0.74
SMC4-207ENST00000467263 MS4A1P11836 297 aa10.42□□□□□ -0.74
SMC4-207ENST00000467263 SH3BP2P78314 561 aa10.42□□□□□ -0.74
SMC4-207ENST00000467263 BEGAINQ9BUH8 593 aa10.42□□□□□ -0.74
SMC4-207ENST00000467263 CCNYL3P0C7X3 344 aa10.41□□□□□ -0.74
SMC4-207ENST00000467263 NFX1Q12986 1120 aaKnown RBP10.41□□□□□ -0.74
SMC4-207ENST00000467263 LINC01559Q495D7 138 aa10.41□□□□□ -0.74
SMC4-207ENST00000467263 PARP9Q8IXQ6 854 aa10.41□□□□□ -0.74
SMC4-207ENST00000467263 PRR7Q8TB68 274 aa10.41□□□□□ -0.74
SMC4-207ENST00000467263 EHBP1Q8NDI1 1231 aa10.4□□□□□ -0.74
SMC4-207ENST00000467263 PCDHB15Q9Y5E8 787 aa10.4□□□□□ -0.74
SMC4-207ENST00000467263 BAP1Q92560 729 aa10.39□□□□□ -0.75
SMC4-207ENST00000467263 TBC1D2Q9BYX2 928 aa10.39□□□□□ -0.75
SMC4-207ENST00000467263 EVA1BQ9NVM1 165 aa10.39□□□□□ -0.75
SMC4-207ENST00000467263 WFS1O76024 890 aa10.38□□□□□ -0.75
SMC4-207ENST00000467263 PTPRNQ16849 979 aa10.38□□□□□ -0.75
SMC4-207ENST00000467263 TRIM47Q96LD4 638 aa10.38□□□□□ -0.75
SMC4-207ENST00000467263 UNC93B1Q9H1C4 597 aa10.38□□□□□ -0.75
SMC4-207ENST00000467263 TRIM66O15016 1216 aa10.37□□□□□ -0.75
SMC4-207ENST00000467263 MTMR2Q13614 643 aa10.37□□□□□ -0.75
SMC4-207ENST00000467263 BMP1P13497 986 aa10.36□□□□□ -0.75
SMC4-207ENST00000467263 TLL2Q9Y6L7 1015 aa10.36□□□□□ -0.75
SMC4-207ENST00000467263 CFAP99D6REC4 459 aa10.35□□□□□ -0.75
SMC4-207ENST00000467263 KCNH2Q12809 1159 aa10.35□□□□□ -0.75
SMC4-207ENST00000467263 RSBN1LQ6PCB5 846 aaPredicted RBP10.35□□□□□ -0.75
SMC4-207ENST00000467263 TRIM46Q7Z4K8 759 aa10.34□□□□□ -0.75
SMC4-207ENST00000467263 ZNF511Q8NB15 262 aa10.32□□□□□ -0.76
SMC4-207ENST00000467263 CABLES1Q8TDN4 633 aa10.32□□□□□ -0.76
SMC4-207ENST00000467263 HRCP23327 699 aa10.31□□□□□ -0.76
SMC4-207ENST00000467263 DESI1Q6ICB0 168 aa10.31□□□□□ -0.76
SMC4-207ENST00000467263 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
SMC4-207ENST00000467263 WASF2Q9Y6W5 498 aa10.31□□□□□ -0.76
SMC4-207ENST00000467263 TERTO14746 1132 aaKnown RBP10.3□□□□□ -0.76
SMC4-207ENST00000467263 SPTLC1O15269 473 aa10.3□□□□□ -0.76
SMC4-207ENST00000467263 LYPD8Q6UX82 237 aa10.3□□□□□ -0.76
SMC4-207ENST00000467263 BCANQ96GW7 911 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms