RNA–Protein interactions for RNA: ENST00000466694.5

NUP58-208, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-208ENST00000466694 YTHDC2Q9H6S0 1430 aaKnown RBP22.65■■□□□ 1.22
NUP58-208ENST00000466694 SENP3-EIF4A1A0A087X0R7 540 aa22.64■■□□□ 1.22
NUP58-208ENST00000466694 EVC2Q86UK5 1308 aa22.64■■□□□ 1.21
NUP58-208ENST00000466694 USP32Q8NFA0 1604 aa22.64■■□□□ 1.21
NUP58-208ENST00000466694 PPP4R2Q9NY27 417 aa22.63■■□□□ 1.21
NUP58-208ENST00000466694 SLIT1O75093 1534 aa22.63■■□□□ 1.21
NUP58-208ENST00000466694 ARHGAP23Q9P227 1491 aa22.61■■□□□ 1.21
NUP58-208ENST00000466694 HDGFP51858 240 aaKnown RBP22.6■■□□□ 1.21
NUP58-208ENST00000466694 WDR43Q15061 677 aaKnown RBP eCLIP22.6■■□□□ 1.21
NUP58-208ENST00000466694 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
NUP58-208ENST00000466694 ADAMTS8Q9UP79 889 aa22.6■■□□□ 1.21
NUP58-208ENST00000466694 NSD3Q9BZ95 1437 aa22.6■■□□□ 1.21
NUP58-208ENST00000466694 DLC1Q96QB1 1528 aa22.6■■□□□ 1.21
NUP58-208ENST00000466694 SLC12A5Q9H2X9 1139 aa22.59■■□□□ 1.21
NUP58-208ENST00000466694 TSHZ2Q9NRE2 1034 aa22.59■■□□□ 1.21
NUP58-208ENST00000466694 KNDC1Q76NI1 1749 aa22.58■■□□□ 1.2
NUP58-208ENST00000466694 CEP170BQ9Y4F5 1589 aaPredicted RBP22.57■■□□□ 1.2
NUP58-208ENST00000466694 ZNF142P52746 1687 aaPredicted RBP22.56■■□□□ 1.2
NUP58-208ENST00000466694 SALL2Q9Y467 1007 aaPredicted RBP22.56■■□□□ 1.2
NUP58-208ENST00000466694 STK26Q9P289 416 aa22.55■■□□□ 1.2
NUP58-208ENST00000466694 ANKRD36BQ8N2N9 1353 aa22.55■■□□□ 1.2
NUP58-208ENST00000466694 PLEKHG1Q9ULL1 1385 aa22.55■■□□□ 1.2
NUP58-208ENST00000466694 NINLQ9Y2I6 1382 aa22.55■■□□□ 1.2
NUP58-208ENST00000466694 PLPPR3Q6T4P5 718 aa22.54■■□□□ 1.2
NUP58-208ENST00000466694 ADAMTS13Q76LX8 1427 aa22.54■■□□□ 1.2
NUP58-208ENST00000466694 LTKP29376 864 aa22.54■■□□□ 1.2
NUP58-208ENST00000466694 SETD1BQ9UPS6 1966 aaKnown RBP22.53■■□□□ 1.2
NUP58-208ENST00000466694 METP08581 1390 aa22.53■■□□□ 1.2
NUP58-208ENST00000466694 ABCC11Q96J66 1382 aa22.52■■□□□ 1.2
NUP58-208ENST00000466694 MED14O60244 1454 aa22.51■■□□□ 1.19
NUP58-208ENST00000466694 POLR3AO14802 1390 aaPredicted RBP22.51■■□□□ 1.19
NUP58-208ENST00000466694 CGNL1Q0VF96 1302 aa22.51■■□□□ 1.19
NUP58-208ENST00000466694 PRAM1Q96QH2 718 aa22.5■■□□□ 1.19
NUP58-208ENST00000466694 CABP2Q9NPB3 220 aa22.5■■□□□ 1.19
NUP58-208ENST00000466694 TECPR2O15040 1411 aa22.5■■□□□ 1.19
NUP58-208ENST00000466694 NSD2O96028 1365 aa22.5■■□□□ 1.19
NUP58-208ENST00000466694 SAFB2Q14151 953 aaKnown RBP eCLIP22.49■■□□□ 1.19
NUP58-208ENST00000466694 MORC1Q86VD1 984 aa22.49■■□□□ 1.19
NUP58-208ENST00000466694 THEMISQ8N1K5 641 aaPredicted RBP22.49■■□□□ 1.19
NUP58-208ENST00000466694 CPS1P31327 1500 aa22.49■■□□□ 1.19
NUP58-208ENST00000466694 POGKQ9P215 609 aa22.49■■□□□ 1.19
NUP58-208ENST00000466694 RCAN3Q9UKA8 241 aa22.49■■□□□ 1.19
NUP58-208ENST00000466694 ATAD2Q6PL18 1390 aa22.49■■□□□ 1.19
NUP58-208ENST00000466694 CDCA7LQ96GN5 454 aa22.48■■□□□ 1.19
NUP58-208ENST00000466694 TXNDC2Q86VQ3 553 aa22.47■■□□□ 1.19
NUP58-208ENST00000466694 SRPK2P78362 688 aaKnown RBP22.45■■□□□ 1.19
NUP58-208ENST00000466694 EID1Q9Y6B2 187 aa22.45■■□□□ 1.19
NUP58-208ENST00000466694 PLEKHH1Q9ULM0 1364 aa22.45■■□□□ 1.18
NUP58-208ENST00000466694 RRP1P56182 461 aaKnown RBP22.45■■□□□ 1.18
NUP58-208ENST00000466694 MINK1Q8N4C8 1332 aaPredicted RBP22.44■■□□□ 1.18
NUP58-208ENST00000466694 ZNF521Q96K83 1311 aa22.44■■□□□ 1.18
NUP58-208ENST00000466694 DIP2AQ14689 1571 aa22.44■■□□□ 1.18
NUP58-208ENST00000466694 FAM135BQ49AJ0 1406 aa22.44■■□□□ 1.18
NUP58-208ENST00000466694 SHPRHQ149N8 1683 aa22.43■■□□□ 1.18
NUP58-208ENST00000466694 A0A1W2PP64 1363 aa22.42■■□□□ 1.18
NUP58-208ENST00000466694 B4GALNT3Q6L9W6 998 aa22.42■■□□□ 1.18
NUP58-208ENST00000466694 SIRT1Q96EB6 747 aa22.42■■□□□ 1.18
NUP58-208ENST00000466694 NGEFQ8N5V2 710 aa22.4■■□□□ 1.18
NUP58-208ENST00000466694 WAPLQ7Z5K2 1190 aa22.39■■□□□ 1.18
NUP58-208ENST00000466694 TERF2IPQ9NYB0 399 aa22.39■■□□□ 1.17
NUP58-208ENST00000466694 CD163L1Q9NR16 1453 aa22.38■■□□□ 1.17
NUP58-208ENST00000466694 ANKRD26Q9UPS8 1709 aa22.38■■□□□ 1.17
NUP58-208ENST00000466694 CCDC146Q8IYE0 955 aa22.38■■□□□ 1.17
NUP58-208ENST00000466694 CDK19Q9BWU1 502 aa22.38■■□□□ 1.17
NUP58-208ENST00000466694 PTPRUQ92729 1446 aa22.38■■□□□ 1.17
NUP58-208ENST00000466694 GOLGA2Q08379 1002 aa22.37■■□□□ 1.17
NUP58-208ENST00000466694 TBX22Q9Y458 520 aa22.37■■□□□ 1.17
NUP58-208ENST00000466694 TNNT2P45379 298 aaPredicted RBP22.37■■□□□ 1.17
NUP58-208ENST00000466694 ROBO2Q9HCK4 1378 aa22.35■■□□□ 1.17
NUP58-208ENST00000466694 APAF1O14727 1248 aa22.35■■□□□ 1.17
NUP58-208ENST00000466694 CFAP53Q96M91 514 aa22.35■■□□□ 1.17
NUP58-208ENST00000466694 XRN1Q8IZH2 1706 aaKnown RBP22.35■■□□□ 1.17
NUP58-208ENST00000466694 MTHFSP49914 203 aa22.34■■□□□ 1.17
NUP58-208ENST00000466694 DUSP27Q5VZP5 1158 aa22.34■■□□□ 1.17
NUP58-208ENST00000466694 SLC26A8Q96RN1 970 aa22.34■■□□□ 1.17
NUP58-208ENST00000466694 ADGRB2O60241 1585 aa22.34■■□□□ 1.17
NUP58-208ENST00000466694 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.33■■□□□ 1.17
NUP58-208ENST00000466694 HDGFL2Q7Z4V5 671 aaPredicted RBP22.32■■□□□ 1.16
NUP58-208ENST00000466694 SLFN5Q08AF3 891 aa22.32■■□□□ 1.16
NUP58-208ENST00000466694 CCDC136Q96JN2 1154 aa22.32■■□□□ 1.16
NUP58-208ENST00000466694 PTCH1Q13635 1447 aa22.31■■□□□ 1.16
NUP58-208ENST00000466694 TRMT2AQ8IZ69 625 aaKnown RBP22.31■■□□□ 1.16
NUP58-208ENST00000466694 ATP7BP35670 1465 aa22.31■■□□□ 1.16
NUP58-208ENST00000466694 KIF20BQ96Q89 1820 aa22.3■■□□□ 1.16
NUP58-208ENST00000466694 PIK3R4Q99570 1358 aa22.29■■□□□ 1.16
NUP58-208ENST00000466694 RUNDC1Q96C34 613 aa22.28■■□□□ 1.16
NUP58-208ENST00000466694 CABP1Q9NZU7 370 aa22.28■■□□□ 1.16
NUP58-208ENST00000466694 IQSEC2Q5JU85 1478 aa22.28■■□□□ 1.16
NUP58-208ENST00000466694 WASLO00401 505 aaPredicted RBP22.28■■□□□ 1.16
NUP58-208ENST00000466694 FYB1O15117 783 aa22.28■■□□□ 1.16
NUP58-208ENST00000466694 ANKLE2Q86XL3 938 aa22.28■■□□□ 1.16
NUP58-208ENST00000466694 CHD2O14647 1828 aaKnown RBP22.28■■□□□ 1.16
NUP58-208ENST00000466694 EXOC6Q8TAG9 804 aa22.26■■□□□ 1.15
NUP58-208ENST00000466694 GGNBP2Q9H3C7 697 aa22.26■■□□□ 1.15
NUP58-208ENST00000466694 RBM19Q9Y4C8 960 aaKnown RBP22.26■■□□□ 1.15
NUP58-208ENST00000466694 E9PSI1 815 aa22.26■■□□□ 1.15
NUP58-208ENST00000466694 AMOTL2Q9Y2J4 779 aa22.26■■□□□ 1.15
NUP58-208ENST00000466694 NKTRP30414 1462 aaKnown RBP22.24■■□□□ 1.15
NUP58-208ENST00000466694 TOPAZ1Q8N9V7 1692 aa22.23■■□□□ 1.15
NUP58-208ENST00000466694 COL3A1P02461 1466 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms