RNA–Protein interactions for RNA: ENST00000466559.1

REPIN1-204, Transcript of replication initiator 1, humanhuman

TSL 1 (best) BASIC

Gene REPIN1, Length 1,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-204ENST00000466559 YTHDC2Q9H6S0 1430 aaKnown RBP38.21■■■■□ 3.71
REPIN1-204ENST00000466559 LAMC1P11047 1609 aa38.21■■■■□ 3.71
REPIN1-204ENST00000466559 NRXN1Q9ULB1 1477 aa38.21■■■■□ 3.71
REPIN1-204ENST00000466559 NUTM2BA6NNL0 878 aaPredicted RBP38.2■■■■□ 3.71
REPIN1-204ENST00000466559 NUTM2EB1AL46 878 aaPredicted RBP38.2■■■■□ 3.71
REPIN1-204ENST00000466559 WAPLQ7Z5K2 1190 aa38.2■■■■□ 3.71
REPIN1-204ENST00000466559 NUTM2AQ8IVF1 878 aaPredicted RBP38.2■■■■□ 3.71
REPIN1-204ENST00000466559 ORAI2Q96SN7 254 aa38.2■■■■□ 3.71
REPIN1-204ENST00000466559 DHX57Q6P158 1386 aaKnown RBP38.17■■■■□ 3.7
REPIN1-204ENST00000466559 CFAP70Q5T0N1 1121 aa38.16■■■■□ 3.7
REPIN1-204ENST00000466559 ESCO1Q5FWF5 840 aa38.13■■■■□ 3.69
REPIN1-204ENST00000466559 ZNF772Q68DY9 489 aaPredicted RBP38.13■■■■□ 3.69
REPIN1-204ENST00000466559 PLEKHH1Q9ULM0 1364 aa38.12■■■■□ 3.69
REPIN1-204ENST00000466559 SIRT1Q96EB6 747 aa38.12■■■■□ 3.69
REPIN1-204ENST00000466559 PNPLA6Q8IY17 1366 aa38.11■■■■□ 3.69
REPIN1-204ENST00000466559 SOS2Q07890 1332 aaPredicted RBP38.1■■■■□ 3.69
REPIN1-204ENST00000466559 DCAF11Q8TEB1 546 aa38.07■■■■□ 3.68
REPIN1-204ENST00000466559 KDM2AQ9Y2K7 1162 aa38.07■■■■□ 3.68
REPIN1-204ENST00000466559 NPHP3Q7Z494 1330 aa38.07■■■■□ 3.68
REPIN1-204ENST00000466559 STAC3Q96MF2 364 aa38.06■■■■□ 3.68
REPIN1-204ENST00000466559 NUTM2FA1L443 756 aa38.05■■■■□ 3.68
REPIN1-204ENST00000466559 FMN2Q9NZ56 1722 aa38■■■■□ 3.67
REPIN1-204ENST00000466559 PRAM1Q96QH2 718 aa37.99■■■■□ 3.67
REPIN1-204ENST00000466559 POGKQ9P215 609 aa37.99■■■■□ 3.67
REPIN1-204ENST00000466559 AFF2P51816 1311 aa37.97■■■■□ 3.67
REPIN1-204ENST00000466559 FOXO3O43524 673 aa37.97■■■■□ 3.67
REPIN1-204ENST00000466559 DLC1Q96QB1 1528 aa37.97■■■■□ 3.67
REPIN1-204ENST00000466559 SAFB2Q14151 953 aaKnown RBP eCLIP37.96■■■■□ 3.67
REPIN1-204ENST00000466559 C8orf37Q96NL8 207 aa37.96■■■■□ 3.67
REPIN1-204ENST00000466559 ADGRB1O14514 1584 aa37.93■■■■□ 3.66
REPIN1-204ENST00000466559 ADAMTS2O95450 1211 aa37.92■■■■□ 3.66
REPIN1-204ENST00000466559 PXDNQ92626 1479 aa37.91■■■■□ 3.66
REPIN1-204ENST00000466559 KIF1AQ12756 1690 aa37.91■■■■□ 3.66
REPIN1-204ENST00000466559 XPCQ01831 940 aaPredicted RBP37.9■■■■□ 3.66
REPIN1-204ENST00000466559 TRAK1Q9UPV9 953 aa37.9■■■■□ 3.66
REPIN1-204ENST00000466559 RXRBP28702 533 aa37.89■■■■□ 3.66
REPIN1-204ENST00000466559 NGLY1Q96IV0 654 aa37.88■■■■□ 3.65
REPIN1-204ENST00000466559 COL22A1Q8NFW1 1626 aaPredicted RBP37.87■■■■□ 3.65
REPIN1-204ENST00000466559 PHF8Q9UPP1 1060 aa37.84■■■■□ 3.65
REPIN1-204ENST00000466559 RGPD8O14715 1765 aaPredicted RBP37.81■■■■□ 3.64
REPIN1-204ENST00000466559 ADGRB2O60241 1585 aa37.8■■■■□ 3.64
REPIN1-204ENST00000466559 KRT28Q7Z3Y7 464 aa37.79■■■■□ 3.64
REPIN1-204ENST00000466559 QTRT2Q9H974 415 aaKnown RBP37.78■■■■□ 3.64
REPIN1-204ENST00000466559 ANKARQ7Z5J8 1434 aa37.78■■■■□ 3.64
REPIN1-204ENST00000466559 PSME1Q06323 249 aa37.77■■■■□ 3.64
REPIN1-204ENST00000466559 EIF3AQ14152 1382 aaKnown RBP37.77■■■■□ 3.64
REPIN1-204ENST00000466559 HIRIP3Q9BW71 556 aaPredicted RBP37.76■■■■□ 3.64
REPIN1-204ENST00000466559 MINK1Q8N4C8 1332 aaPredicted RBP37.76■■■■□ 3.64
REPIN1-204ENST00000466559 SPATA31A3Q5VYP0 1347 aa37.75■■■■□ 3.63
REPIN1-204ENST00000466559 CDK12Q9NYV4 1490 aaPredicted RBP37.75■■■■□ 3.63
REPIN1-204ENST00000466559 RBM6P78332 1123 aaKnown RBP37.74■■■■□ 3.63
REPIN1-204ENST00000466559 USP21Q9UK80 565 aa37.73■■■■□ 3.63
REPIN1-204ENST00000466559 KIAA1210Q9ULL0 1709 aa37.68■■■■□ 3.62
REPIN1-204ENST00000466559 FNBP4Q8N3X1 1017 aaPredicted RBP37.68■■■■□ 3.62
REPIN1-204ENST00000466559 TNS3Q68CZ2 1445 aa37.68■■■■□ 3.62
REPIN1-204ENST00000466559 USP32Q8NFA0 1604 aa37.68■■■■□ 3.62
REPIN1-204ENST00000466559 ARHGEF28Q8N1W1 1705 aaKnown RBP37.67■■■■□ 3.62
REPIN1-204ENST00000466559 WASLO00401 505 aaPredicted RBP37.67■■■■□ 3.62
REPIN1-204ENST00000466559 PMFBP1Q8TBY8 1022 aa37.67■■■■□ 3.62
REPIN1-204ENST00000466559 TRPC5Q9UL62 973 aaPredicted RBP37.66■■■■□ 3.62
REPIN1-204ENST00000466559 MARF1Q9Y4F3 1742 aaKnown RBP37.66■■■■□ 3.62
REPIN1-204ENST00000466559 TULP4Q9NRJ4 1543 aa37.65■■■■□ 3.62
REPIN1-204ENST00000466559 HAP1P54257 671 aaPredicted RBP37.64■■■■□ 3.62
REPIN1-204ENST00000466559 SBNO1A3KN83 1393 aa37.64■■■■□ 3.62
REPIN1-204ENST00000466559 LMOD2Q6P5Q4 547 aa37.63■■■■□ 3.61
REPIN1-204ENST00000466559 ARHGEF10O15013 1369 aa37.6■■■■□ 3.61
REPIN1-204ENST00000466559 GPRASP1Q5JY77 1395 aa37.59■■■■□ 3.61
REPIN1-204ENST00000466559 RGS12O14924 1447 aa37.59■■■■□ 3.61
REPIN1-204ENST00000466559 PRR36Q9H6K5 1346 aa37.59■■■■□ 3.61
REPIN1-204ENST00000466559 ATRNO75882 1429 aa37.55■■■■□ 3.6
REPIN1-204ENST00000466559 NBPF1Q3BBV0 1214 aa37.54■■■■□ 3.6
REPIN1-204ENST00000466559 NGDNQ8NEJ9 315 aaKnown RBP37.54■■■■□ 3.6
REPIN1-204ENST00000466559 PLEKHG5O94827 1062 aa37.53■■■■□ 3.6
REPIN1-204ENST00000466559 UPF1Q92900 1129 aaKnown RBP eCLIP37.53■■■■□ 3.65e-7■■■□□ 16.4
REPIN1-204ENST00000466559 BCL9LQ86UU0 1499 aa37.52■■■■□ 3.6
REPIN1-204ENST00000466559 ITSN1Q15811 1721 aa37.51■■■■□ 3.6
REPIN1-204ENST00000466559 L3MBTL2Q969R5 705 aa37.51■■■■□ 3.6
REPIN1-204ENST00000466559 CABLES1Q8TDN4 633 aa37.5■■■■□ 3.59
REPIN1-204ENST00000466559 NUDT16Q96DE0 195 aaKnown RBP37.5■■■■□ 3.59
REPIN1-204ENST00000466559 SIN3AQ96ST3 1273 aa37.5■■■■□ 3.59
REPIN1-204ENST00000466559 NEUROD1Q13562 356 aa37.48■■■■□ 3.59
REPIN1-204ENST00000466559 CDK19Q9BWU1 502 aa37.48■■■■□ 3.59
REPIN1-204ENST00000466559 ATP7BP35670 1465 aa37.47■■■■□ 3.59
REPIN1-204ENST00000466559 TRPM3Q9HCF6 1732 aaPredicted RBP37.47■■■■□ 3.59
REPIN1-204ENST00000466559 UNC5CLQ8IV45 518 aa37.46■■■■□ 3.59
REPIN1-204ENST00000466559 SLIT2O94813 1529 aa37.45■■■■□ 3.59
REPIN1-204ENST00000466559 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.44■■■■□ 3.58
REPIN1-204ENST00000466559 ABCA3Q99758 1704 aa37.43■■■■□ 3.58
REPIN1-204ENST00000466559 CENPJQ9HC77 1338 aaPredicted RBP37.42■■■■□ 3.58
REPIN1-204ENST00000466559 PAK3O75914 559 aaPredicted RBP37.42■■■■□ 3.58
REPIN1-204ENST00000466559 GJD4Q96KN9 370 aaPredicted RBP37.42■■■■□ 3.58
REPIN1-204ENST00000466559 ALS2Q96Q42 1657 aa37.4■■■■□ 3.58
REPIN1-204ENST00000466559 CCDC61Q9Y6R9 512 aa37.39■■■■□ 3.58
REPIN1-204ENST00000466559 ATAD2Q6PL18 1390 aa37.37■■■■□ 3.57
REPIN1-204ENST00000466559 SRPK2P78362 688 aaKnown RBP37.35■■■■□ 3.57
REPIN1-204ENST00000466559 NWD2Q9ULI1 1742 aa37.34■■■■□ 3.57
REPIN1-204ENST00000466559 PLCH1Q4KWH8 1693 aa37.34■■■■□ 3.57
REPIN1-204ENST00000466559 TOPAZ1Q8N9V7 1692 aa37.33■■■■□ 3.57
REPIN1-204ENST00000466559 TRPM1Q7Z4N2 1603 aa37.32■■■■□ 3.57
REPIN1-204ENST00000466559 RALGAPBQ86X10 1494 aa37.32■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms