RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 MSS51Q4VC12 460 aa8.12□□□□□ -1.11
CD55-207ENST00000465534 SMYD5Q6GMV2 418 aa8.12□□□□□ -1.11
CD55-207ENST00000465534 WNT7AO00755 349 aa8.1□□□□□ -1.11
CD55-207ENST00000465534 SMPD1P17405 629 aa8.1□□□□□ -1.11
CD55-207ENST00000465534 NFX1Q12986 1120 aaKnown RBP8.1□□□□□ -1.11
CD55-207ENST00000465534 SNIP1Q8TAD8 396 aaKnown RBP8.09□□□□□ -1.11
CD55-207ENST00000465534 TRIM32Q13049 653 aa8.08□□□□□ -1.12
CD55-207ENST00000465534 GRIPAP1Q4V328 841 aa8.08□□□□□ -1.12
CD55-207ENST00000465534 MRGPRX2Q96LB1 330 aa8.07□□□□□ -1.12
CD55-207ENST00000465534 ATP13A2Q9NQ11 1180 aa8.07□□□□□ -1.12
CD55-207ENST00000465534 J3QL48 77 aa8.06□□□□□ -1.12
CD55-207ENST00000465534 SNRPBP14678 240 aaKnown RBP8.06□□□□□ -1.12
CD55-207ENST00000465534 MMP16P51512 607 aa8.06□□□□□ -1.12
CD55-207ENST00000465534 Q3C1V9 767 aa8.06□□□□□ -1.12
CD55-207ENST00000465534 WIPF1O43516 503 aa8.05□□□□□ -1.12
CD55-207ENST00000465534 STK17AQ9UEE5 414 aa8.04□□□□□ -1.12
CD55-207ENST00000465534 LCE2CQ5TA81 110 aa8.03□□□□□ -1.12
CD55-207ENST00000465534 HPS1Q92902 700 aa8.03□□□□□ -1.12
CD55-207ENST00000465534 DXOO77932 396 aaKnown RBP8.02□□□□□ -1.13
CD55-207ENST00000465534 CD46P15529 392 aa8.02□□□□□ -1.13
CD55-207ENST00000465534 INSM1Q01101 510 aaPredicted RBP8.02□□□□□ -1.13
CD55-207ENST00000465534 GPIHBP1Q8IV16 184 aa8.02□□□□□ -1.13
CD55-207ENST00000465534 CCDC24Q8N4L8 307 aa8.02□□□□□ -1.13
CD55-207ENST00000465534 TRIM47Q96LD4 638 aa8.02□□□□□ -1.13
CD55-207ENST00000465534 USB1Q9BQ65 265 aaKnown RBP8.02□□□□□ -1.13
CD55-207ENST00000465534 SENP2Q9HC62 589 aa8.02□□□□□ -1.13
CD55-207ENST00000465534 TERTO14746 1132 aaKnown RBP8.01□□□□□ -1.13
CD55-207ENST00000465534 REPIN1Q9BWE0 567 aaKnown RBP8.01□□□□□ -1.13
CD55-207ENST00000465534 KDM4AO75164 1064 aa8□□□□□ -1.13
CD55-207ENST00000465534 RC3H1Q5TC82 1133 aaKnown RBP8□□□□□ -1.13
CD55-207ENST00000465534 HLA-CQ95604 372 aa8□□□□□ -1.13
CD55-207ENST00000465534 SKOR1P84550 965 aa8□□□□□ -1.13
CD55-207ENST00000465534 KIFC2Q96AC6 838 aa7.97□□□□□ -1.13
CD55-207ENST00000465534 WNT7BP56706 349 aa7.96□□□□□ -1.13
CD55-207ENST00000465534 ALDH1A1P00352 501 aa7.95□□□□□ -1.14
CD55-207ENST00000465534 USP46P62068 366 aa7.95□□□□□ -1.14
CD55-207ENST00000465534 MDM2Q00987 491 aaPredicted RBP7.95□□□□□ -1.14
CD55-207ENST00000465534 GUCA2AQ02747 115 aa7.95□□□□□ -1.14
CD55-207ENST00000465534 HOXA2O43364 376 aa7.94□□□□□ -1.14
CD55-207ENST00000465534 MAP2K5Q13163 448 aa7.94□□□□□ -1.14
CD55-207ENST00000465534 SYMPKQ92797 1274 aaKnown RBP7.94□□□□□ -1.14
CD55-207ENST00000465534 JUNDP17535 347 aa7.93□□□□□ -1.14
CD55-207ENST00000465534 IRF6O14896 467 aa7.92□□□□□ -1.14
CD55-207ENST00000465534 BMP1P13497 986 aa7.91□□□□□ -1.14
CD55-207ENST00000465534 PTCRAQ6ISU1 281 aaPredicted RBP7.91□□□□□ -1.14
CD55-207ENST00000465534 EHBP1Q8NDI1 1231 aa7.91□□□□□ -1.14
CD55-207ENST00000465534 SLC16A10Q8TF71 515 aa7.91□□□□□ -1.14
CD55-207ENST00000465534 SIAH2O43255 324 aa7.9□□□□□ -1.14
CD55-207ENST00000465534 NUDT12Q9BQG2 462 aa7.9□□□□□ -1.14
CD55-207ENST00000465534 NXF1Q9UBU9 619 aaKnown RBP7.9□□□□□ -1.14
CD55-207ENST00000465534 CAPN5O15484 640 aaPredicted RBP7.89□□□□□ -1.15
CD55-207ENST00000465534 PLCB2Q00722 1185 aa7.89□□□□□ -1.15
CD55-207ENST00000465534 TRIM46Q7Z4K8 759 aa7.89□□□□□ -1.15
CD55-207ENST00000465534 WASF2Q9Y6W5 498 aa7.88□□□□□ -1.15
CD55-207ENST00000465534 GMPRP36959 345 aa7.87□□□□□ -1.15
CD55-207ENST00000465534 RETREG3Q86VR2 466 aa7.87□□□□□ -1.15
CD55-207ENST00000465534 MINK1Q8N4C8 1332 aaPredicted RBP7.87□□□□□ -1.15
CD55-207ENST00000465534 VEGFBP49765 207 aa7.87□□□□□ -1.15
CD55-207ENST00000465534 CCDC102AQ96A19 550 aa7.87□□□□□ -1.15
CD55-207ENST00000465534 NUTM1Q86Y26 1132 aa7.86□□□□□ -1.15
CD55-207ENST00000465534 GPCPD1Q9NPB8 672 aa7.86□□□□□ -1.15
CD55-207ENST00000465534 FAM217BQ9NTX9 383 aaPredicted RBP7.86□□□□□ -1.15
CD55-207ENST00000465534 FAM181BA6NEQ2 426 aa7.85□□□□□ -1.15
CD55-207ENST00000465534 SH3BP2P78314 561 aa7.85□□□□□ -1.15
CD55-207ENST00000465534 IRF7Q92985 503 aa7.85□□□□□ -1.15
CD55-207ENST00000465534 C6orf229H3BNL8 230 aa7.84□□□□□ -1.15
CD55-207ENST00000465534 CLCN1P35523 988 aa7.84□□□□□ -1.15
CD55-207ENST00000465534 ZSCAN1Q8NBB4 408 aa7.84□□□□□ -1.15
CD55-207ENST00000465534 PCDHGC3Q9UN70 934 aa7.84□□□□□ -1.15
CD55-207ENST00000465534 CCNYL3P0C7X3 344 aa7.83□□□□□ -1.16
CD55-207ENST00000465534 FDX1P10109 184 aa7.83□□□□□ -1.16
CD55-207ENST00000465534 MS4A1P11836 297 aa7.83□□□□□ -1.16
CD55-207ENST00000465534 LORP23490 312 aaPredicted RBP7.83□□□□□ -1.16
CD55-207ENST00000465534 NPAS3Q8IXF0 933 aa7.83□□□□□ -1.16
CD55-207ENST00000465534 LINC01559Q495D7 138 aa7.82□□□□□ -1.16
CD55-207ENST00000465534 ZFP42Q96MM3 310 aa7.82□□□□□ -1.16
CD55-207ENST00000465534 TLL2Q9Y6L7 1015 aa7.82□□□□□ -1.16
CD55-207ENST00000465534 H3BM21 787 aa7.81□□□□□ -1.16
CD55-207ENST00000465534 KRI1Q8N9T8 703 aaKnown RBP7.81□□□□□ -1.16
CD55-207ENST00000465534 UNC93B1Q9H1C4 597 aa7.81□□□□□ -1.16
CD55-207ENST00000465534 ERBB4Q15303 1308 aa7.81□□□□□ -1.16
CD55-207ENST00000465534 TULP1O00294 542 aaPredicted RBP7.81□□□□□ -1.16
CD55-207ENST00000465534 BAP1Q92560 729 aa7.8□□□□□ -1.16
CD55-207ENST00000465534 KDM2AQ9Y2K7 1162 aa7.8□□□□□ -1.16
CD55-207ENST00000465534 HAP1P54257 671 aaPredicted RBP7.79□□□□□ -1.16
CD55-207ENST00000465534 PTPRNQ16849 979 aa7.79□□□□□ -1.16
CD55-207ENST00000465534 EVA1BQ9NVM1 165 aa7.79□□□□□ -1.16
CD55-207ENST00000465534 KCNH2Q12809 1159 aa7.78□□□□□ -1.16
CD55-207ENST00000465534 NNTQ13423 1086 aa7.78□□□□□ -1.16
CD55-207ENST00000465534 NDUFV2P19404 249 aa7.77□□□□□ -1.17
CD55-207ENST00000465534 PLEKHG3A1L390 1219 aa7.76□□□□□ -1.17
CD55-207ENST00000465534 VARSP26640 1264 aaKnown RBP7.76□□□□□ -1.17
CD55-207ENST00000465534 MRPL14Q6P1L8 145 aaKnown RBP7.76□□□□□ -1.17
CD55-207ENST00000465534 ZNF511Q8NB15 262 aa7.76□□□□□ -1.17
CD55-207ENST00000465534 PRR7Q8TB68 274 aa7.76□□□□□ -1.17
CD55-207ENST00000465534 SPIRE2Q8WWL2 714 aa7.76□□□□□ -1.17
CD55-207ENST00000465534 PURBQ96QR8 312 aaKnown RBP7.76□□□□□ -1.17
CD55-207ENST00000465534 MOXD2PA6NHM9 499 aa7.75□□□□□ -1.17
CD55-207ENST00000465534 SOBPA7XYQ1 873 aa7.75□□□□□ -1.17
CD55-207ENST00000465534 SSTR3P32745 418 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms