RNA–Protein interactions for RNA: ENST00000465085.2

ABCD4-203, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,123 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-203ENST00000465085 ADAMTS2O95450 1211 aa18.89■□□□□ 0.61
ABCD4-203ENST00000465085 NGLY1Q96IV0 654 aa18.89■□□□□ 0.61
ABCD4-203ENST00000465085 TECPR2O15040 1411 aa18.89■□□□□ 0.61
ABCD4-203ENST00000465085 CCDC144AA2RUR9 1427 aa18.88■□□□□ 0.61
ABCD4-203ENST00000465085 PXDNQ92626 1479 aa18.88■□□□□ 0.61
ABCD4-203ENST00000465085 MYOM2P54296 1465 aa18.87■□□□□ 0.61
ABCD4-203ENST00000465085 SPATA31E1Q6ZUB1 1445 aa18.87■□□□□ 0.61
ABCD4-203ENST00000465085 NPHP3Q7Z494 1330 aa18.85■□□□□ 0.61
ABCD4-203ENST00000465085 ANKRD30BQ9BXX2 1392 aa18.84■□□□□ 0.61
ABCD4-203ENST00000465085 ADGRF5Q8IZF2 1346 aa18.84■□□□□ 0.61
ABCD4-203ENST00000465085 FMN2Q9NZ56 1722 aa18.84■□□□□ 0.61
ABCD4-203ENST00000465085 FOXD1Q16676 465 aa18.84■□□□□ 0.61
ABCD4-203ENST00000465085 FNBP4Q8N3X1 1017 aaPredicted RBP18.84■□□□□ 0.61
ABCD4-203ENST00000465085 USP21Q9UK80 565 aa18.84■□□□□ 0.61
ABCD4-203ENST00000465085 ATRNO75882 1429 aa18.83■□□□□ 0.61
ABCD4-203ENST00000465085 LRPPRCP42704 1394 aaKnown RBP18.83■□□□□ 0.61
ABCD4-203ENST00000465085 TRPC5Q9UL62 973 aaPredicted RBP18.83■□□□□ 0.6
ABCD4-203ENST00000465085 ESCO1Q5FWF5 840 aa18.82■□□□□ 0.6
ABCD4-203ENST00000465085 EP400Q96L91 3159 aa18.82■□□□□ 0.6
ABCD4-203ENST00000465085 KIF1AQ12756 1690 aa18.82■□□□□ 0.6
ABCD4-203ENST00000465085 PIK3C2GO75747 1445 aa18.82■□□□□ 0.6
ABCD4-203ENST00000465085 ATAD2Q6PL18 1390 aa18.81■□□□□ 0.6
ABCD4-203ENST00000465085 ABCC11Q96J66 1382 aa18.81■□□□□ 0.6
ABCD4-203ENST00000465085 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.81■□□□□ 0.6
ABCD4-203ENST00000465085 BCL9LQ86UU0 1499 aa18.78■□□□□ 0.6
ABCD4-203ENST00000465085 FOXO3O43524 673 aa18.78■□□□□ 0.6
ABCD4-203ENST00000465085 RGL3Q3MIN7 710 aa18.78■□□□□ 0.6
ABCD4-203ENST00000465085 MPHOSPH9Q99550 1183 aa18.78■□□□□ 0.6
ABCD4-203ENST00000465085 YTHDC2Q9H6S0 1430 aaKnown RBP18.77■□□□□ 0.6
ABCD4-203ENST00000465085 SRCAPQ6ZRS2 3230 aa18.77■□□□□ 0.6
ABCD4-203ENST00000465085 WAPLQ7Z5K2 1190 aa18.77■□□□□ 0.6
ABCD4-203ENST00000465085 STK26Q9P289 416 aa18.77■□□□□ 0.6
ABCD4-203ENST00000465085 PLEKHH1Q9ULM0 1364 aa18.77■□□□□ 0.6
ABCD4-203ENST00000465085 RGPD8O14715 1765 aaPredicted RBP18.76■□□□□ 0.59
ABCD4-203ENST00000465085 XPCQ01831 940 aaPredicted RBP18.75■□□□□ 0.59
ABCD4-203ENST00000465085 NRXN1Q9ULB1 1477 aa18.74■□□□□ 0.59
ABCD4-203ENST00000465085 TMEM132EQ6IEE7 984 aa18.74■□□□□ 0.59
ABCD4-203ENST00000465085 USP32Q8NFA0 1604 aa18.74■□□□□ 0.59
ABCD4-203ENST00000465085 NUTM2FA1L443 756 aa18.73■□□□□ 0.59
ABCD4-203ENST00000465085 SIRT1Q96EB6 747 aa18.72■□□□□ 0.59
ABCD4-203ENST00000465085 SPATA31A3Q5VYP0 1347 aa18.72■□□□□ 0.59
ABCD4-203ENST00000465085 SLIT2O94813 1529 aa18.71■□□□□ 0.59
ABCD4-203ENST00000465085 ACIN1Q9UKV3 1341 aaKnown RBP18.71■□□□□ 0.59
ABCD4-203ENST00000465085 GLI3P10071 1580 aa18.7■□□□□ 0.58
ABCD4-203ENST00000465085 GJD4Q96KN9 370 aaPredicted RBP18.7■□□□□ 0.58
ABCD4-203ENST00000465085 ABCA3Q99758 1704 aa18.7■□□□□ 0.58
ABCD4-203ENST00000465085 C14orf93Q9H972 538 aaKnown RBP18.69■□□□□ 0.58
ABCD4-203ENST00000465085 PLCH1Q4KWH8 1693 aa18.68■□□□□ 0.58
ABCD4-203ENST00000465085 NWD2Q9ULI1 1742 aa18.68■□□□□ 0.58
ABCD4-203ENST00000465085 BRWD3Q6RI45 1802 aa18.67■□□□□ 0.58
ABCD4-203ENST00000465085 TNS3Q68CZ2 1445 aa18.67■□□□□ 0.58
ABCD4-203ENST00000465085 RALGAPBQ86X10 1494 aa18.67■□□□□ 0.58
ABCD4-203ENST00000465085 CCDC125Q86Z20 511 aa18.67■□□□□ 0.58
ABCD4-203ENST00000465085 UNC5CLQ8IV45 518 aa18.67■□□□□ 0.58
ABCD4-203ENST00000465085 DLC1Q96QB1 1528 aa18.67■□□□□ 0.58
ABCD4-203ENST00000465085 DHX57Q6P158 1386 aaKnown RBP18.67■□□□□ 0.58
ABCD4-203ENST00000465085 KRT28Q7Z3Y7 464 aa18.66■□□□□ 0.58
ABCD4-203ENST00000465085 ADGRB2O60241 1585 aa18.66■□□□□ 0.58
ABCD4-203ENST00000465085 PHF8Q9UPP1 1060 aa18.64■□□□□ 0.57
ABCD4-203ENST00000465085 CFAP70Q5T0N1 1121 aa18.63■□□□□ 0.57
ABCD4-203ENST00000465085 SBNO1A3KN83 1393 aa18.63■□□□□ 0.57
ABCD4-203ENST00000465085 ANKARQ7Z5J8 1434 aa18.63■□□□□ 0.57
ABCD4-203ENST00000465085 PSME1Q06323 249 aa18.62■□□□□ 0.57
ABCD4-203ENST00000465085 ADGRB1O14514 1584 aa18.62■□□□□ 0.57
ABCD4-203ENST00000465085 TRPM3Q9HCF6 1732 aaPredicted RBP18.61■□□□□ 0.57
ABCD4-203ENST00000465085 ARHGEF10O15013 1369 aa18.61■□□□□ 0.57
ABCD4-203ENST00000465085 PRAM1Q96QH2 718 aa18.61■□□□□ 0.57
ABCD4-203ENST00000465085 ZRANB1Q9UGI0 708 aa18.61■□□□□ 0.57
ABCD4-203ENST00000465085 BLMP54132 1417 aaPredicted RBP18.6■□□□□ 0.57
ABCD4-203ENST00000465085 NRAPQ86VF7 1730 aa18.58■□□□□ 0.57
ABCD4-203ENST00000465085 ALS2Q96Q42 1657 aa18.58■□□□□ 0.57
ABCD4-203ENST00000465085 HAP1P54257 671 aaPredicted RBP18.58■□□□□ 0.56
ABCD4-203ENST00000465085 VPS72Q15906 364 aa18.58■□□□□ 0.56
ABCD4-203ENST00000465085 SAFB2Q14151 953 aaKnown RBP eCLIP18.57■□□□□ 0.56
ABCD4-203ENST00000465085 CABLES1Q8TDN4 633 aa18.57■□□□□ 0.56
ABCD4-203ENST00000465085 RAB3GAP2Q9H2M9 1393 aa18.56■□□□□ 0.56
ABCD4-203ENST00000465085 POGKQ9P215 609 aa18.56■□□□□ 0.56
ABCD4-203ENST00000465085 EIF3AQ14152 1382 aaKnown RBP18.55■□□□□ 0.56
ABCD4-203ENST00000465085 CRYBG1Q9Y4K1 1723 aa18.54■□□□□ 0.56
ABCD4-203ENST00000465085 TULP4Q9NRJ4 1543 aa18.54■□□□□ 0.56
ABCD4-203ENST00000465085 ONECUT3O60422 494 aaPredicted RBP18.54■□□□□ 0.56
ABCD4-203ENST00000465085 SEPT12Q8IYM1 358 aa18.54■□□□□ 0.56
ABCD4-203ENST00000465085 COL14A1Q05707 1796 aaKnown RBP18.54■□□□□ 0.56
ABCD4-203ENST00000465085 LMOD2Q6P5Q4 547 aa18.53■□□□□ 0.56
ABCD4-203ENST00000465085 PMFBP1Q8TBY8 1022 aa18.53■□□□□ 0.56
ABCD4-203ENST00000465085 ITSN1Q15811 1721 aa18.52■□□□□ 0.56
ABCD4-203ENST00000465085 ARHGEF28Q8N1W1 1705 aaKnown RBP18.52■□□□□ 0.55
ABCD4-203ENST00000465085 FAM83GA6ND36 823 aa18.5■□□□□ 0.55
ABCD4-203ENST00000465085 PLEKHG5O94827 1062 aa18.5■□□□□ 0.55
ABCD4-203ENST00000465085 TRAK1Q9UPV9 953 aa18.5■□□□□ 0.55
ABCD4-203ENST00000465085 GPRASP1Q5JY77 1395 aa18.5■□□□□ 0.55
ABCD4-203ENST00000465085 PRR36Q9H6K5 1346 aa18.49■□□□□ 0.55
ABCD4-203ENST00000465085 HIRIP3Q9BW71 556 aaPredicted RBP18.49■□□□□ 0.55
ABCD4-203ENST00000465085 CCDC9Q9Y3X0 531 aaKnown RBP18.49■□□□□ 0.55
ABCD4-203ENST00000465085 SF3B2Q13435 895 aaKnown RBP18.48■□□□□ 0.55
ABCD4-203ENST00000465085 KRT27Q7Z3Y8 459 aa18.48■□□□□ 0.55
ABCD4-203ENST00000465085 DEFB132Q7Z7B7 95 aa18.48■□□□□ 0.55
ABCD4-203ENST00000465085 MINK1Q8N4C8 1332 aaPredicted RBP18.48■□□□□ 0.55
ABCD4-203ENST00000465085 STAC3Q96MF2 364 aa18.47■□□□□ 0.55
ABCD4-203ENST00000465085 WASLO00401 505 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms