RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 USP21Q9UK80 565 aa22.1■■□□□ 1.13
MCF2L-220ENST00000464800 TRPC5Q9UL62 973 aaPredicted RBP22.07■■□□□ 1.12
MCF2L-220ENST00000464800 MYOM2P54296 1465 aa22.06■■□□□ 1.12
MCF2L-220ENST00000464800 ATRNO75882 1429 aa22.06■■□□□ 1.12
MCF2L-220ENST00000464800 NPHP3Q7Z494 1330 aa22.06■■□□□ 1.12
MCF2L-220ENST00000464800 PXDNQ92626 1479 aa22.05■■□□□ 1.12
MCF2L-220ENST00000464800 FNBP4Q8N3X1 1017 aaPredicted RBP22.05■■□□□ 1.12
MCF2L-220ENST00000464800 SLC4A1APQ9BWU0 796 aaKnown RBP22.05■■□□□ 1.12
MCF2L-220ENST00000464800 KNDC1Q76NI1 1749 aa22.03■■□□□ 1.12
MCF2L-220ENST00000464800 IFT172Q9UG01 1749 aa22.03■■□□□ 1.12
MCF2L-220ENST00000464800 ESCO1Q5FWF5 840 aa22.02■■□□□ 1.12
MCF2L-220ENST00000464800 TNKS1BP1Q9C0C2 1729 aaKnown RBP22■■□□□ 1.11
MCF2L-220ENST00000464800 TECPR2O15040 1411 aa21.99■■□□□ 1.11
MCF2L-220ENST00000464800 LRPPRCP42704 1394 aaKnown RBP21.99■■□□□ 1.11
MCF2L-220ENST00000464800 KIF1AQ12756 1690 aa21.98■■□□□ 1.11
MCF2L-220ENST00000464800 BCL9LQ86UU0 1499 aa21.98■■□□□ 1.11
MCF2L-220ENST00000464800 FMN2Q9NZ56 1722 aa21.98■■□□□ 1.11
MCF2L-220ENST00000464800 CCDC144AA2RUR9 1427 aa21.97■■□□□ 1.11
MCF2L-220ENST00000464800 XPCQ01831 940 aaPredicted RBP21.97■■□□□ 1.11
MCF2L-220ENST00000464800 FOXO3O43524 673 aa21.96■■□□□ 1.11
MCF2L-220ENST00000464800 FOXD1Q16676 465 aa21.96■■□□□ 1.11
MCF2L-220ENST00000464800 ADGRF5Q8IZF2 1346 aa21.96■■□□□ 1.11
MCF2L-220ENST00000464800 STK26Q9P289 416 aa21.94■■□□□ 1.1
MCF2L-220ENST00000464800 ANKRD30BQ9BXX2 1392 aa21.94■■□□□ 1.1
MCF2L-220ENST00000464800 SPATA31E1Q6ZUB1 1445 aa21.93■■□□□ 1.1
MCF2L-220ENST00000464800 USP32Q8NFA0 1604 aa21.92■■□□□ 1.1
MCF2L-220ENST00000464800 NUTM2FA1L443 756 aa21.92■■□□□ 1.1
MCF2L-220ENST00000464800 WAPLQ7Z5K2 1190 aa21.92■■□□□ 1.1
MCF2L-220ENST00000464800 ZRANB1Q9UGI0 708 aa21.92■■□□□ 1.1
MCF2L-220ENST00000464800 PIK3C2GO75747 1445 aa21.91■■□□□ 1.1
MCF2L-220ENST00000464800 ABCC11Q96J66 1382 aa21.91■■□□□ 1.1
MCF2L-220ENST00000464800 GJD4Q96KN9 370 aaPredicted RBP21.91■■□□□ 1.1
MCF2L-220ENST00000464800 EP400Q96L91 3159 aa21.91■■□□□ 1.1
MCF2L-220ENST00000464800 PLEKHH1Q9ULM0 1364 aa21.9■■□□□ 1.1
MCF2L-220ENST00000464800 RGL3Q3MIN7 710 aa21.9■■□□□ 1.1
MCF2L-220ENST00000464800 CCDC125Q86Z20 511 aa21.9■■□□□ 1.1
MCF2L-220ENST00000464800 GLI3P10071 1580 aa21.9■■□□□ 1.1
MCF2L-220ENST00000464800 SLIT2O94813 1529 aa21.89■■□□□ 1.09
MCF2L-220ENST00000464800 RGPD8O14715 1765 aaPredicted RBP21.89■■□□□ 1.09
MCF2L-220ENST00000464800 RALGAPBQ86X10 1494 aa21.88■■□□□ 1.09
MCF2L-220ENST00000464800 YTHDC2Q9H6S0 1430 aaKnown RBP21.88■■□□□ 1.09
MCF2L-220ENST00000464800 BRWD3Q6RI45 1802 aa21.87■■□□□ 1.09
MCF2L-220ENST00000464800 SPATA31A3Q5VYP0 1347 aa21.87■■□□□ 1.09
MCF2L-220ENST00000464800 TMEM132EQ6IEE7 984 aa21.87■■□□□ 1.09
MCF2L-220ENST00000464800 PLCH1Q4KWH8 1693 aa21.86■■□□□ 1.09
MCF2L-220ENST00000464800 UNC5CLQ8IV45 518 aa21.86■■□□□ 1.09
MCF2L-220ENST00000464800 ABCA3Q99758 1704 aa21.86■■□□□ 1.09
MCF2L-220ENST00000464800 NWD2Q9ULI1 1742 aa21.84■■□□□ 1.09
MCF2L-220ENST00000464800 BLMP54132 1417 aaPredicted RBP21.83■■□□□ 1.09
MCF2L-220ENST00000464800 TNS3Q68CZ2 1445 aa21.83■■□□□ 1.09
MCF2L-220ENST00000464800 SRCAPQ6ZRS2 3230 aa21.82■■□□□ 1.08
MCF2L-220ENST00000464800 HAP1P54257 671 aaPredicted RBP21.81■■□□□ 1.08
MCF2L-220ENST00000464800 KRT28Q7Z3Y7 464 aa21.81■■□□□ 1.08
MCF2L-220ENST00000464800 MPHOSPH9Q99550 1183 aa21.81■■□□□ 1.08
MCF2L-220ENST00000464800 SIRT1Q96EB6 747 aa21.79■■□□□ 1.08
MCF2L-220ENST00000464800 NRXN1Q9ULB1 1477 aa21.78■■□□□ 1.08
MCF2L-220ENST00000464800 PSME1Q06323 249 aa21.78■■□□□ 1.08
MCF2L-220ENST00000464800 PHF8Q9UPP1 1060 aa21.78■■□□□ 1.08
MCF2L-220ENST00000464800 SBNO1A3KN83 1393 aa21.76■■□□□ 1.07
MCF2L-220ENST00000464800 ARHGEF10O15013 1369 aa21.75■■□□□ 1.07
MCF2L-220ENST00000464800 DHX57Q6P158 1386 aaKnown RBP21.75■■□□□ 1.07
MCF2L-220ENST00000464800 C14orf93Q9H972 538 aaKnown RBP21.75■■□□□ 1.07
MCF2L-220ENST00000464800 ADGRB2O60241 1585 aa21.74■■□□□ 1.07
MCF2L-220ENST00000464800 VPS72Q15906 364 aa21.74■■□□□ 1.07
MCF2L-220ENST00000464800 SEPT12Q8IYM1 358 aa21.74■■□□□ 1.07
MCF2L-220ENST00000464800 CABLES1Q8TDN4 633 aa21.74■■□□□ 1.07
MCF2L-220ENST00000464800 NRAPQ86VF7 1730 aa21.73■■□□□ 1.07
MCF2L-220ENST00000464800 SF3B2Q13435 895 aaKnown RBP21.73■■□□□ 1.07
MCF2L-220ENST00000464800 DLC1Q96QB1 1528 aa21.73■■□□□ 1.07
MCF2L-220ENST00000464800 PLEKHG5O94827 1062 aa21.72■■□□□ 1.07
MCF2L-220ENST00000464800 LMOD2Q6P5Q4 547 aa21.72■■□□□ 1.07
MCF2L-220ENST00000464800 CCDC9Q9Y3X0 531 aaKnown RBP21.72■■□□□ 1.07
MCF2L-220ENST00000464800 TRPM3Q9HCF6 1732 aaPredicted RBP21.72■■□□□ 1.07
MCF2L-220ENST00000464800 ANKARQ7Z5J8 1434 aa21.72■■□□□ 1.07
MCF2L-220ENST00000464800 CFAP70Q5T0N1 1121 aa21.71■■□□□ 1.07
MCF2L-220ENST00000464800 PRAM1Q96QH2 718 aa21.71■■□□□ 1.07
MCF2L-220ENST00000464800 SAFB2Q14151 953 aaKnown RBP eCLIP21.7■■□□□ 1.06
MCF2L-220ENST00000464800 DEFB132Q7Z7B7 95 aa21.7■■□□□ 1.06
MCF2L-220ENST00000464800 LRP5O75197 1615 aa21.69■■□□□ 1.06
MCF2L-220ENST00000464800 ALS2Q96Q42 1657 aa21.69■■□□□ 1.06
MCF2L-220ENST00000464800 KRT27Q7Z3Y8 459 aa21.68■■□□□ 1.06
MCF2L-220ENST00000464800 ACIN1Q9UKV3 1341 aaKnown RBP21.68■■□□□ 1.06
MCF2L-220ENST00000464800 COL14A1Q05707 1796 aaKnown RBP21.68■■□□□ 1.06
MCF2L-220ENST00000464800 ONECUT3O60422 494 aaPredicted RBP21.67■■□□□ 1.06
MCF2L-220ENST00000464800 POGKQ9P215 609 aa21.67■■□□□ 1.06
MCF2L-220ENST00000464800 ADGRB1O14514 1584 aa21.65■■□□□ 1.06
MCF2L-220ENST00000464800 A0A0G2JS52 829 aa21.65■■□□□ 1.06
MCF2L-220ENST00000464800 MYT1Q01538 1121 aa21.65■■□□□ 1.06
MCF2L-220ENST00000464800 PMFBP1Q8TBY8 1022 aa21.65■■□□□ 1.06
MCF2L-220ENST00000464800 CRYBG1Q9Y4K1 1723 aa21.64■■□□□ 1.06
MCF2L-220ENST00000464800 RGPD1P0DJD0 1748 aa21.63■■□□□ 1.05
MCF2L-220ENST00000464800 EIF3AQ14152 1382 aaKnown RBP21.63■■□□□ 1.05
MCF2L-220ENST00000464800 FAM83GA6ND36 823 aa21.63■■□□□ 1.05
MCF2L-220ENST00000464800 TULP4Q9NRJ4 1543 aa21.63■■□□□ 1.05
MCF2L-220ENST00000464800 GPRASP1Q5JY77 1395 aa21.61■■□□□ 1.05
MCF2L-220ENST00000464800 ITSN1Q15811 1721 aa21.6■■□□□ 1.05
MCF2L-220ENST00000464800 BAG6P46379 1132 aa21.6■■□□□ 1.05
MCF2L-220ENST00000464800 FAM98CQ17RN3 349 aaKnown RBP21.6■■□□□ 1.05
MCF2L-220ENST00000464800 BTG4Q9NY30 223 aa21.6■■□□□ 1.05
MCF2L-220ENST00000464800 HIRIP3Q9BW71 556 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms