RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 PPLO60437 1756 aa30.42■■■□□ 2.46
CD58-204ENST00000464088 RPGRIP1LQ68CZ1 1315 aa30.4■■■□□ 2.46
CD58-204ENST00000464088 ATAD2Q6PL18 1390 aa30.4■■■□□ 2.46
CD58-204ENST00000464088 IFT172Q9UG01 1749 aa30.39■■■□□ 2.46
CD58-204ENST00000464088 SOS2Q07890 1332 aaPredicted RBP30.38■■■□□ 2.45
CD58-204ENST00000464088 ADAMTS2O95450 1211 aa30.37■■■□□ 2.45
CD58-204ENST00000464088 RGL3Q3MIN7 710 aa30.35■■■□□ 2.45
CD58-204ENST00000464088 PTCH1Q13635 1447 aa30.35■■■□□ 2.45
CD58-204ENST00000464088 FNBP4Q8N3X1 1017 aaPredicted RBP30.34■■■□□ 2.45
CD58-204ENST00000464088 COL22A1Q8NFW1 1626 aaPredicted RBP30.33■■■□□ 2.45
CD58-204ENST00000464088 USP21Q9UK80 565 aa30.33■■■□□ 2.45
CD58-204ENST00000464088 TRPC5Q9UL62 973 aaPredicted RBP30.33■■■□□ 2.45
CD58-204ENST00000464088 PRAG1Q86YV5 1406 aa30.31■■■□□ 2.44
CD58-204ENST00000464088 ORAI2Q96SN7 254 aa30.3■■■□□ 2.44
CD58-204ENST00000464088 ATRNO75882 1429 aa30.3■■■□□ 2.44
CD58-204ENST00000464088 EP400Q96L91 3159 aa30.29■■■□□ 2.44
CD58-204ENST00000464088 VGFO15240 615 aaPredicted RBP30.28■■■□□ 2.44
CD58-204ENST00000464088 SIN3AQ96ST3 1273 aa30.28■■■□□ 2.44
CD58-204ENST00000464088 ROBO2Q9HCK4 1378 aa30.28■■■□□ 2.44
CD58-204ENST00000464088 MYOM2P54296 1465 aa30.25■■■□□ 2.43
CD58-204ENST00000464088 ZRANB1Q9UGI0 708 aa30.24■■■□□ 2.43
CD58-204ENST00000464088 ADGRF5Q8IZF2 1346 aa30.23■■■□□ 2.43
CD58-204ENST00000464088 MARF1Q9Y4F3 1742 aaKnown RBP30.22■■■□□ 2.43
CD58-204ENST00000464088 CCDC125Q86Z20 511 aa30.22■■■□□ 2.43
CD58-204ENST00000464088 NRXN1Q9ULB1 1477 aa30.22■■■□□ 2.43
CD58-204ENST00000464088 BCL9LQ86UU0 1499 aa30.19■■■□□ 2.42
CD58-204ENST00000464088 PIK3C2GO75747 1445 aa30.17■■■□□ 2.42
CD58-204ENST00000464088 NEUROD1Q13562 356 aa30.16■■■□□ 2.42
CD58-204ENST00000464088 PXDNQ92626 1479 aa30.16■■■□□ 2.42
CD58-204ENST00000464088 DCAF11Q8TEB1 546 aa30.15■■■□□ 2.42
CD58-204ENST00000464088 NPHP3Q7Z494 1330 aa30.15■■■□□ 2.42
CD58-204ENST00000464088 CDC42BPGQ6DT37 1551 aa30.15■■■□□ 2.42
CD58-204ENST00000464088 STAC3Q96MF2 364 aa30.14■■■□□ 2.42
CD58-204ENST00000464088 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.13■■■□□ 2.41
CD58-204ENST00000464088 CLSPNQ9HAW4 1339 aa30.12■■■□□ 2.41
CD58-204ENST00000464088 GJD4Q96KN9 370 aaPredicted RBP30.1■■■□□ 2.41
CD58-204ENST00000464088 KDM2AQ9Y2K7 1162 aa30.1■■■□□ 2.41
CD58-204ENST00000464088 ESCO1Q5FWF5 840 aa30.09■■■□□ 2.41
CD58-204ENST00000464088 L3MBTL2Q969R5 705 aa30.09■■■□□ 2.41
CD58-204ENST00000464088 C14orf93Q9H972 538 aaKnown RBP30.05■■■□□ 2.4
CD58-204ENST00000464088 LRPPRCP42704 1394 aaKnown RBP30.03■■■□□ 2.4
CD58-204ENST00000464088 FOXO3O43524 673 aa30.03■■■□□ 2.4
CD58-204ENST00000464088 CCER1Q8TC90 406 aaPredicted RBP30.03■■■□□ 2.4
CD58-204ENST00000464088 GLI3P10071 1580 aa30.03■■■□□ 2.4
CD58-204ENST00000464088 SLIT2O94813 1529 aa30.01■■■□□ 2.4
CD58-204ENST00000464088 CFAP70Q5T0N1 1121 aa30.01■■■□□ 2.39
CD58-204ENST00000464088 BLMP54132 1417 aaPredicted RBP30.01■■■□□ 2.39
CD58-204ENST00000464088 UNC5CLQ8IV45 518 aa30■■■□□ 2.39
CD58-204ENST00000464088 RALGAPBQ86X10 1494 aa29.99■■■□□ 2.39
CD58-204ENST00000464088 XPCQ01831 940 aaPredicted RBP29.99■■■□□ 2.39
CD58-204ENST00000464088 TONSLQ96HA7 1378 aa29.99■■■□□ 2.39
CD58-204ENST00000464088 BRWD3Q6RI45 1802 aa29.99■■■□□ 2.39
CD58-204ENST00000464088 TECPR2O15040 1411 aa29.98■■■□□ 2.39
CD58-204ENST00000464088 KIAA1210Q9ULL0 1709 aa29.97■■■□□ 2.39
CD58-204ENST00000464088 ADGRB1O14514 1584 aa29.96■■■□□ 2.39
CD58-204ENST00000464088 TMEM132EQ6IEE7 984 aa29.94■■■□□ 2.38
CD58-204ENST00000464088 SPATA31A3Q5VYP0 1347 aa29.94■■■□□ 2.38
CD58-204ENST00000464088 USP32Q8NFA0 1604 aa29.93■■■□□ 2.38
CD58-204ENST00000464088 KIF1AQ12756 1690 aa29.93■■■□□ 2.38
CD58-204ENST00000464088 FMN2Q9NZ56 1722 aa29.93■■■□□ 2.38
CD58-204ENST00000464088 KNDC1Q76NI1 1749 aa29.92■■■□□ 2.38
CD58-204ENST00000464088 YTHDC2Q9H6S0 1430 aaKnown RBP29.9■■■□□ 2.38
CD58-204ENST00000464088 WAPLQ7Z5K2 1190 aa29.9■■■□□ 2.38
CD58-204ENST00000464088 ABCC11Q96J66 1382 aa29.9■■■□□ 2.38
CD58-204ENST00000464088 LRP5O75197 1615 aa29.89■■■□□ 2.38
CD58-204ENST00000464088 NUTM2FA1L443 756 aa29.88■■■□□ 2.37
CD58-204ENST00000464088 TRPM1Q7Z4N2 1603 aa29.88■■■□□ 2.37
CD58-204ENST00000464088 DEFB132Q7Z7B7 95 aa29.87■■■□□ 2.37
CD58-204ENST00000464088 NWD2Q9ULI1 1742 aa29.86■■■□□ 2.37
CD58-204ENST00000464088 NBPF8Q3BBV2 869 aa29.86■■■□□ 2.37
CD58-204ENST00000464088 TIMELESSQ9UNS1 1208 aa29.86■■■□□ 2.37
CD58-204ENST00000464088 ONECUT3O60422 494 aaPredicted RBP29.85■■■□□ 2.37
CD58-204ENST00000464088 STK26Q9P289 416 aa29.85■■■□□ 2.37
CD58-204ENST00000464088 VPS72Q15906 364 aa29.84■■■□□ 2.37
CD58-204ENST00000464088 SEPT12Q8IYM1 358 aa29.84■■■□□ 2.37
CD58-204ENST00000464088 PLEKHH1Q9ULM0 1364 aa29.84■■■□□ 2.37
CD58-204ENST00000464088 PLCH1Q4KWH8 1693 aa29.83■■■□□ 2.37
CD58-204ENST00000464088 SF3B2Q13435 895 aaKnown RBP29.83■■■□□ 2.37
CD58-204ENST00000464088 KRT28Q7Z3Y7 464 aa29.83■■■□□ 2.37
CD58-204ENST00000464088 NBPF1Q3BBV0 1214 aa29.82■■■□□ 2.36
CD58-204ENST00000464088 DLC1Q96QB1 1528 aa29.81■■■□□ 2.36
CD58-204ENST00000464088 RGPD8O14715 1765 aaPredicted RBP29.81■■■□□ 2.36
CD58-204ENST00000464088 TNS3Q68CZ2 1445 aa29.8■■■□□ 2.36
CD58-204ENST00000464088 SIRT1Q96EB6 747 aa29.79■■■□□ 2.36
CD58-204ENST00000464088 ABCA3Q99758 1704 aa29.79■■■□□ 2.36
CD58-204ENST00000464088 KRT27Q7Z3Y8 459 aa29.76■■■□□ 2.35
CD58-204ENST00000464088 PSME1Q06323 249 aa29.75■■■□□ 2.35
CD58-204ENST00000464088 ARHGEF28Q8N1W1 1705 aaKnown RBP29.75■■■□□ 2.35
CD58-204ENST00000464088 SBNO1A3KN83 1393 aa29.75■■■□□ 2.35
CD58-204ENST00000464088 HAP1P54257 671 aaPredicted RBP29.73■■■□□ 2.35
CD58-204ENST00000464088 CABLES1Q8TDN4 633 aa29.73■■■□□ 2.35
CD58-204ENST00000464088 PHF8Q9UPP1 1060 aa29.73■■■□□ 2.35
CD58-204ENST00000464088 TRAK1Q9UPV9 953 aa29.73■■■□□ 2.35
CD58-204ENST00000464088 GPRASP1Q5JY77 1395 aa29.73■■■□□ 2.35
CD58-204ENST00000464088 ARHGEF10O15013 1369 aa29.7■■■□□ 2.35
CD58-204ENST00000464088 ROCK2O75116 1388 aaKnown RBP29.7■■■□□ 2.35
CD58-204ENST00000464088 NRAPQ86VF7 1730 aa29.68■■■□□ 2.34
CD58-204ENST00000464088 PRAM1Q96QH2 718 aa29.68■■■□□ 2.34
CD58-204ENST00000464088 CCDC9Q9Y3X0 531 aaKnown RBP29.68■■■□□ 2.34
CD58-204ENST00000464088 BAG6P46379 1132 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms